RNA–Protein interactions for RNA: ENST00000589733.1

MBD1-219, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 2

Gene MBD1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-219ENST00000589733 NISCHQ9Y2I1 1504 aa37.09■■■■□ 3.53
MBD1-219ENST00000589733 CCDC180Q9P1Z9 1646 aa33.12■■■□□ 2.89
MBD1-219ENST00000589733 ABCC9O60706 1549 aa32.21■■■□□ 2.75
MBD1-219ENST00000589733 RB1CC1Q8TDY2 1594 aa31.11■■■□□ 2.57
MBD1-219ENST00000589733 NACADO15069 1562 aa31.05■■■□□ 2.56
MBD1-219ENST00000589733 ZCCHC6Q5VYS8 1495 aaKnown RBP30.93■■■□□ 2.54
MBD1-219ENST00000589733 DCAF8L2P0C7V8 631 aa30.87■■■□□ 2.53
MBD1-219ENST00000589733 MYO15BQ96JP2 1530 aa30.87■■■□□ 2.53
MBD1-219ENST00000589733 DCAF1Q9Y4B6 1507 aa30.73■■■□□ 2.51
MBD1-219ENST00000589733 UNC13AQ9UPW8 1703 aa30.44■■■□□ 2.46
MBD1-219ENST00000589733 SCRIBQ14160 1630 aa30.14■■■□□ 2.41
MBD1-219ENST00000589733 BICRAQ9NZM4 1560 aa30.07■■■□□ 2.4
MBD1-219ENST00000589733 PABPN1Q86U42 306 aaKnown RBP eCLIP30.01■■■□□ 2.39
MBD1-219ENST00000589733 SHROOM4Q9ULL8 1493 aa29.88■■■□□ 2.37
MBD1-219ENST00000589733 DNAJC5BQ9UF47 199 aa29.38■■■□□ 2.29
MBD1-219ENST00000589733 EIF4G1Q04637 1599 aaKnown RBP29.32■■■□□ 2.28
MBD1-219ENST00000589733 CC2D2AQ9P2K1 1620 aa29.2■■■□□ 2.27
MBD1-219ENST00000589733 CECR2Q9BXF3 1484 aa28.97■■■□□ 2.23
MBD1-219ENST00000589733 SMARCA4P51532 1647 aa28.83■■■□□ 2.21
MBD1-219ENST00000589733 BAZ1AQ9NRL2 1556 aaPredicted RBP28.81■■■□□ 2.2
MBD1-219ENST00000589733 SMARCA2P51531 1590 aa28.65■■■□□ 2.18
MBD1-219ENST00000589733 ATAD2BQ9ULI0 1458 aa28.59■■■□□ 2.17
MBD1-219ENST00000589733 NCAPD3P42695 1498 aa28.57■■■□□ 2.16
MBD1-219ENST00000589733 MROH2BQ7Z745 1585 aa28.55■■■□□ 2.16
MBD1-219ENST00000589733 PEG3Q9GZU2 1588 aa28.54■■■□□ 2.16
MBD1-219ENST00000589733 HMGXB3Q12766 1538 aa28.53■■■□□ 2.16
MBD1-219ENST00000589733 BAZ1BQ9UIG0 1483 aaKnown RBP28.41■■■□□ 2.14
MBD1-219ENST00000589733 WIZO95785 1651 aa28.31■■■□□ 2.12
MBD1-219ENST00000589733 RSF1Q96T23 1441 aaPredicted RBP28.19■■■□□ 2.1
MBD1-219ENST00000589733 TOP2AP11388 1531 aaKnown RBP28.03■■■□□ 2.08
MBD1-219ENST00000589733 LAMC3Q9Y6N6 1575 aa27.91■■■□□ 2.06
MBD1-219ENST00000589733 NESP48681 1621 aa27.86■■■□□ 2.05
MBD1-219ENST00000589733 ERCC6Q03468 1493 aa27.83■■■□□ 2.05
MBD1-219ENST00000589733 CADPSQ9ULU8 1353 aa27.73■■■□□ 2.03
MBD1-219ENST00000589733 PDS5BQ9NTI5 1447 aa27.67■■■□□ 2.02
MBD1-219ENST00000589733 KIF21AQ7Z4S6 1674 aa27.67■■■□□ 2.02
MBD1-219ENST00000589733 CCDC88BA6NC98 1476 aa27.61■■■□□ 2.01
MBD1-219ENST00000589733 PRDM2Q13029 1718 aa27.61■■■□□ 2.01
MBD1-219ENST00000589733 CFTRP13569 1480 aa27.58■■■□□ 2.01
MBD1-219ENST00000589733 THOC2Q8NI27 1593 aaKnown RBP27.55■■■□□ 2
MBD1-219ENST00000589733 CUX2O14529 1486 aa27.54■■■□□ 2
MBD1-219ENST00000589733 CEP164Q9UPV0 1460 aa27.46■■□□□ 1.99
MBD1-219ENST00000589733 SUPT5HO00267 1087 aaKnown RBP27.46■■□□□ 1.99
MBD1-219ENST00000589733 FANCD2Q9BXW9 1451 aa27.45■■□□□ 1.99
MBD1-219ENST00000589733 MRC2Q9UBG0 1479 aa27.4■■□□□ 1.98
MBD1-219ENST00000589733 WDR62O43379 1518 aa27.32■■□□□ 1.96
MBD1-219ENST00000589733 URB2Q14146 1524 aaKnown RBP27.16■■□□□ 1.94
MBD1-219ENST00000589733 ABCC8Q09428 1581 aa27.06■■□□□ 1.92
MBD1-219ENST00000589733 DNMBPQ6XZF7 1577 aa27.04■■□□□ 1.92
MBD1-219ENST00000589733 TOPBP1Q92547 1522 aa27.02■■□□□ 1.92
MBD1-219ENST00000589733 IFT140Q96RY7 1462 aa26.86■■□□□ 1.89
MBD1-219ENST00000589733 CUX1P39880 1505 aa26.8■■□□□ 1.88
MBD1-219ENST00000589733 POLA1P09884 1462 aaPredicted RBP26.78■■□□□ 1.88
MBD1-219ENST00000589733 TARBP1Q13395 1621 aaKnown RBP26.74■■□□□ 1.87
MBD1-219ENST00000589733 FGD5Q6ZNL6 1462 aa26.74■■□□□ 1.87
MBD1-219ENST00000589733 EIF4G3O43432 1585 aaKnown RBP26.69■■□□□ 1.86
MBD1-219ENST00000589733 ZNF608Q9ULD9 1512 aaPredicted RBP26.67■■□□□ 1.86
MBD1-219ENST00000589733 BIVM-ERCC5R4GMW8 1640 aa26.67■■□□□ 1.86
MBD1-219ENST00000589733 TOP2BQ02880 1626 aa26.65■■□□□ 1.86
MBD1-219ENST00000589733 SOGA1O94964 1423 aa26.65■■□□□ 1.86
MBD1-219ENST00000589733 WRNQ14191 1432 aaPredicted RBP eCLIP26.65■■□□□ 1.86
MBD1-219ENST00000589733 WDR97A6NE52 1622 aa26.64■■□□□ 1.85
MBD1-219ENST00000589733 RAD54L2Q9Y4B4 1467 aa26.62■■□□□ 1.85
MBD1-219ENST00000589733 SYNJ1O43426 1573 aa26.61■■□□□ 1.85
MBD1-219ENST00000589733 DNAJC5Q9H3Z4 198 aa26.52■■□□□ 1.84
MBD1-219ENST00000589733 AQRO60306 1485 aaKnown RBP eCLIP26.5■■□□□ 1.832e-7■■■■□ 24
MBD1-219ENST00000589733 ABCA10Q8WWZ4 1543 aa26.48■■□□□ 1.83
MBD1-219ENST00000589733 TDRD9Q8NDG6 1382 aaKnown RBP26.45■■□□□ 1.82
MBD1-219ENST00000589733 PBRM1Q86U86 1689 aa26.44■■□□□ 1.82
MBD1-219ENST00000589733 ABCA5Q8WWZ7 1642 aa26.43■■□□□ 1.82
MBD1-219ENST00000589733 GRIN2BQ13224 1484 aa26.38■■□□□ 1.81
MBD1-219ENST00000589733 CHD1O14646 1710 aa26.38■■□□□ 1.81
MBD1-219ENST00000589733 GAPVD1Q14C86 1478 aa26.36■■□□□ 1.81
MBD1-219ENST00000589733 SNAPC4Q5SXM2 1469 aa26.34■■□□□ 1.81
MBD1-219ENST00000589733 MAGI1Q96QZ7 1491 aaPredicted RBP26.34■■□□□ 1.81
MBD1-219ENST00000589733 OSCARQ8IYS5 282 aa26.29■■□□□ 1.8
MBD1-219ENST00000589733 SYNJ2O15056 1496 aa26.21■■□□□ 1.79
MBD1-219ENST00000589733 ERICH3Q5RHP9 1530 aa26.2■■□□□ 1.79
MBD1-219ENST00000589733 FBLN2P98095 1184 aa26.19■■□□□ 1.78
MBD1-219ENST00000589733 ADAMTS12P58397 1594 aa26.18■■□□□ 1.78
MBD1-219ENST00000589733 CHMP7Q8WUX9 453 aaPredicted RBP26.13■■□□□ 1.77
MBD1-219ENST00000589733 KIF27Q86VH2 1401 aa26.1■■□□□ 1.77
MBD1-219ENST00000589733 FHAD1B1AJZ9 1412 aa26.06■■□□□ 1.76
MBD1-219ENST00000589733 GRIN2AQ12879 1464 aa26.04■■□□□ 1.76
MBD1-219ENST00000589733 CUL7Q14999 1698 aa26.04■■□□□ 1.76
MBD1-219ENST00000589733 CLASP1Q7Z460 1538 aa26.03■■□□□ 1.76
MBD1-219ENST00000589733 RIMBP3CA6NJZ7 1639 aa25.99■■□□□ 1.75
MBD1-219ENST00000589733 RIMBP3BA6NNM3 1639 aa25.99■■□□□ 1.75
MBD1-219ENST00000589733 RIMBP3Q9UFD9 1639 aa25.99■■□□□ 1.75
MBD1-219ENST00000589733 TRIM41Q8WV44 630 aa25.97■■□□□ 1.75
MBD1-219ENST00000589733 ARHGEF11O15085 1522 aa25.95■■□□□ 1.74
MBD1-219ENST00000589733 CEP170Q5SW79 1584 aa25.92■■□□□ 1.74
MBD1-219ENST00000589733 NUP160Q12769 1436 aa25.89■■□□□ 1.74
MBD1-219ENST00000589733 IGF1RP08069 1367 aa25.89■■□□□ 1.74
MBD1-219ENST00000589733 RUSC2Q8N2Y8 1516 aa25.8■■□□□ 1.72
MBD1-219ENST00000589733 CARMIL1Q5VZK9 1371 aa25.79■■□□□ 1.72
MBD1-219ENST00000589733 SHROOM2Q13796 1616 aa25.77■■□□□ 1.72
MBD1-219ENST00000589733 ARAP1Q96P48 1450 aa25.72■■□□□ 1.71
MBD1-219ENST00000589733 RAPGEF2Q9Y4G8 1499 aa25.69■■□□□ 1.7
MBD1-219ENST00000589733 KIAA0586Q9BVV6 1533 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms