RNA–Protein interactions for RNA: ENST00000269471.9

MBD1-202, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MBD1, Length 2,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-202ENST00000269471 NISCHQ9Y2I1 1504 aa34.82■■■■□ 3.17
MBD1-202ENST00000269471 CCDC180Q9P1Z9 1646 aa29.87■■■□□ 2.37
MBD1-202ENST00000269471 DCAF8L2P0C7V8 631 aa29.49■■■□□ 2.31
MBD1-202ENST00000269471 SHROOM4Q9ULL8 1493 aa29.35■■■□□ 2.29
MBD1-202ENST00000269471 ZCCHC6Q5VYS8 1495 aaKnown RBP29.25■■■□□ 2.27
MBD1-202ENST00000269471 ABCC9O60706 1549 aa28.72■■■□□ 2.19
MBD1-202ENST00000269471 DCAF1Q9Y4B6 1507 aa28.44■■■□□ 2.14
MBD1-202ENST00000269471 SUPT5HO00267 1087 aaKnown RBP28.38■■■□□ 2.13
MBD1-202ENST00000269471 SCRIBQ14160 1630 aa28.07■■■□□ 2.08
MBD1-202ENST00000269471 MYO15BQ96JP2 1530 aa27.91■■■□□ 2.06
MBD1-202ENST00000269471 NACADO15069 1562 aa27.89■■■□□ 2.05
MBD1-202ENST00000269471 RB1CC1Q8TDY2 1594 aa27.66■■■□□ 2.02
MBD1-202ENST00000269471 PABPN1Q86U42 306 aaKnown RBP eCLIP27.39■■□□□ 1.97
MBD1-202ENST00000269471 CECR2Q9BXF3 1484 aa27.34■■□□□ 1.97
MBD1-202ENST00000269471 RSF1Q96T23 1441 aaPredicted RBP27.28■■□□□ 1.96
MBD1-202ENST00000269471 UNC13AQ9UPW8 1703 aa27.2■■□□□ 1.94
MBD1-202ENST00000269471 MROH2BQ7Z745 1585 aa27.1■■□□□ 1.93
MBD1-202ENST00000269471 CHIC1Q5VXU3 224 aa27.03■■□□□ 1.92
MBD1-202ENST00000269471 BICRAQ9NZM4 1560 aa26.95■■□□□ 1.91
MBD1-202ENST00000269471 WIZO95785 1651 aa26.9■■□□□ 1.9
MBD1-202ENST00000269471 BAZ1AQ9NRL2 1556 aaPredicted RBP26.79■■□□□ 1.88
MBD1-202ENST00000269471 SMARCA4P51532 1647 aa26.68■■□□□ 1.86
MBD1-202ENST00000269471 HRCP23327 699 aa26.45■■□□□ 1.82
MBD1-202ENST00000269471 TRIM41Q8WV44 630 aa26.41■■□□□ 1.82
MBD1-202ENST00000269471 TOP2AP11388 1531 aaKnown RBP26.38■■□□□ 1.81
MBD1-202ENST00000269471 CCDC88BA6NC98 1476 aa26.34■■□□□ 1.81
MBD1-202ENST00000269471 LOC105371045A0A1W2PR82 267 aa26.33■■□□□ 1.81
MBD1-202ENST00000269471 FAM9AQ8IZU1 332 aaPredicted RBP26.31■■□□□ 1.8
MBD1-202ENST00000269471 ATAD2BQ9ULI0 1458 aa26.26■■□□□ 1.79
MBD1-202ENST00000269471 SMARCA2P51531 1590 aa26.24■■□□□ 1.79
MBD1-202ENST00000269471 EHMT2Q96KQ7 1210 aa26.23■■□□□ 1.79
MBD1-202ENST00000269471 BAZ1BQ9UIG0 1483 aaKnown RBP26.16■■□□□ 1.78
MBD1-202ENST00000269471 EIF4G1Q04637 1599 aaKnown RBP26.14■■□□□ 1.78
MBD1-202ENST00000269471 PCGF6Q9BYE7 350 aa26.13■■□□□ 1.77
MBD1-202ENST00000269471 PEG3Q9GZU2 1588 aa26.12■■□□□ 1.77
MBD1-202ENST00000269471 PPARGC1BQ86YN6 1023 aaKnown RBP26.04■■□□□ 1.76
MBD1-202ENST00000269471 ABCC8Q09428 1581 aa26.04■■□□□ 1.76
MBD1-202ENST00000269471 NCAPD3P42695 1498 aa25.86■■□□□ 1.73
MBD1-202ENST00000269471 CC2D2AQ9P2K1 1620 aa25.74■■□□□ 1.71
MBD1-202ENST00000269471 HMGXB3Q12766 1538 aa25.72■■□□□ 1.71
MBD1-202ENST00000269471 WRNQ14191 1432 aaPredicted RBP eCLIP25.66■■□□□ 1.7
MBD1-202ENST00000269471 SOGA1O94964 1423 aa25.65■■□□□ 1.7
MBD1-202ENST00000269471 DNAJC5BQ9UF47 199 aa25.6■■□□□ 1.69
MBD1-202ENST00000269471 RUSC2Q8N2Y8 1516 aa25.58■■□□□ 1.69
MBD1-202ENST00000269471 SYNJ1O43426 1573 aa25.55■■□□□ 1.68
MBD1-202ENST00000269471 CFTRP13569 1480 aa25.42■■□□□ 1.66
MBD1-202ENST00000269471 CSRNP3Q8WYN3 585 aa25.41■■□□□ 1.66
MBD1-202ENST00000269471 CADPSQ9ULU8 1353 aa25.37■■□□□ 1.65
MBD1-202ENST00000269471 UBTFP17480 764 aaKnown RBP25.33■■□□□ 1.65
MBD1-202ENST00000269471 NESP48681 1621 aa25.31■■□□□ 1.64
MBD1-202ENST00000269471 CUX1P39880 1505 aa25.26■■□□□ 1.63
MBD1-202ENST00000269471 TRIM26Q12899 539 aaPredicted RBP25.26■■□□□ 1.63
MBD1-202ENST00000269471 RANGAP1P46060 587 aaPredicted RBP25.23■■□□□ 1.63
MBD1-202ENST00000269471 TOP2BQ02880 1626 aa25.23■■□□□ 1.63
MBD1-202ENST00000269471 EEA1Q15075 1411 aa25.15■■□□□ 1.62
MBD1-202ENST00000269471 FANCD2Q9BXW9 1451 aa25.12■■□□□ 1.61
MBD1-202ENST00000269471 BIVM-ERCC5R4GMW8 1640 aa25.11■■□□□ 1.61
MBD1-202ENST00000269471 TTBK1Q5TCY1 1321 aaPredicted RBP25.1■■□□□ 1.61
MBD1-202ENST00000269471 CEP162Q5TB80 1403 aa25.05■■□□□ 1.6
MBD1-202ENST00000269471 GOLGA3Q08378 1498 aa25.03■■□□□ 1.6
MBD1-202ENST00000269471 RAPGEF2Q9Y4G8 1499 aa25.02■■□□□ 1.6
MBD1-202ENST00000269471 TNIKQ9UKE5 1360 aa25.02■■□□□ 1.6
MBD1-202ENST00000269471 PRDM2Q13029 1718 aa25.01■■□□□ 1.59
MBD1-202ENST00000269471 PELP1Q8IZL8 1130 aaKnown RBP24.98■■□□□ 1.59
MBD1-202ENST00000269471 FGD5Q6ZNL6 1462 aa24.97■■□□□ 1.59
MBD1-202ENST00000269471 CEP164Q9UPV0 1460 aa24.97■■□□□ 1.59
MBD1-202ENST00000269471 CUX2O14529 1486 aa24.93■■□□□ 1.58
MBD1-202ENST00000269471 KIF27Q86VH2 1401 aa24.93■■□□□ 1.58
MBD1-202ENST00000269471 SCAF1Q9H7N4 1312 aaKnown RBP24.92■■□□□ 1.58
MBD1-202ENST00000269471 RAD54L2Q9Y4B4 1467 aa24.9■■□□□ 1.58
MBD1-202ENST00000269471 ZEB1P37275 1124 aaPredicted RBP24.9■■□□□ 1.58
MBD1-202ENST00000269471 KIF21BO75037 1637 aa24.86■■□□□ 1.57
MBD1-202ENST00000269471 LAMC3Q9Y6N6 1575 aa24.85■■□□□ 1.57
MBD1-202ENST00000269471 TOPBP1Q92547 1522 aa24.84■■□□□ 1.57
MBD1-202ENST00000269471 PDS5BQ9NTI5 1447 aa24.81■■□□□ 1.56
MBD1-202ENST00000269471 URB2Q14146 1524 aaKnown RBP24.8■■□□□ 1.56
MBD1-202ENST00000269471 PRXQ9BXM0 1461 aa24.79■■□□□ 1.56
MBD1-202ENST00000269471 POLA1P09884 1462 aaPredicted RBP24.78■■□□□ 1.56
MBD1-202ENST00000269471 IGF1RP08069 1367 aa24.78■■□□□ 1.56
MBD1-202ENST00000269471 CLIP1P30622 1438 aa24.78■■□□□ 1.56
MBD1-202ENST00000269471 DNMBPQ6XZF7 1577 aa24.77■■□□□ 1.56
MBD1-202ENST00000269471 KIF21AQ7Z4S6 1674 aa24.74■■□□□ 1.55
MBD1-202ENST00000269471 TDRD9Q8NDG6 1382 aaKnown RBP24.71■■□□□ 1.55
MBD1-202ENST00000269471 CARMIL1Q5VZK9 1371 aa24.67■■□□□ 1.54
MBD1-202ENST00000269471 ERICH3Q5RHP9 1530 aa24.61■■□□□ 1.53
MBD1-202ENST00000269471 ABCA10Q8WWZ4 1543 aa24.58■■□□□ 1.53
MBD1-202ENST00000269471 P3H3Q8IVL6 736 aa24.55■■□□□ 1.52
MBD1-202ENST00000269471 VPS8Q8N3P4 1428 aa24.5■■□□□ 1.51
MBD1-202ENST00000269471 APLP2Q06481 763 aa24.5■■□□□ 1.51
MBD1-202ENST00000269471 ERCC6Q03468 1493 aa24.49■■□□□ 1.51
MBD1-202ENST00000269471 ARAP1Q96P48 1450 aa24.46■■□□□ 1.51
MBD1-202ENST00000269471 MRC2Q9UBG0 1479 aa24.46■■□□□ 1.51
MBD1-202ENST00000269471 AQRO60306 1485 aaKnown RBP eCLIP24.45■■□□□ 1.56e-7■■■□□ 18.9
MBD1-202ENST00000269471 GAPVD1Q14C86 1478 aa24.44■■□□□ 1.5
MBD1-202ENST00000269471 ARHGAP35Q9NRY4 1499 aa24.4■■□□□ 1.5
MBD1-202ENST00000269471 ATP1B4Q9UN42 357 aaPredicted RBP24.37■■□□□ 1.49
MBD1-202ENST00000269471 KANK4Q5T7N3 995 aaPredicted RBP24.36■■□□□ 1.49
MBD1-202ENST00000269471 WDR97A6NE52 1622 aa24.35■■□□□ 1.49
MBD1-202ENST00000269471 NEUROD1Q13562 356 aa24.35■■□□□ 1.49
MBD1-202ENST00000269471 TARBP1Q13395 1621 aaKnown RBP24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms