RNA–Protein interactions for RNA: ENST00000464539.1

TNRC6A-205, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 1,853 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-205ENST00000464539 NISCHQ9Y2I1 1504 aa23.58■■□□□ 1.36
TNRC6A-205ENST00000464539 ABCC9O60706 1549 aa21.93■■□□□ 1.1
TNRC6A-205ENST00000464539 CCDC180Q9P1Z9 1646 aa21.42■■□□□ 1.02
TNRC6A-205ENST00000464539 DNAJC5BQ9UF47 199 aa21.03■□□□□ 0.96
TNRC6A-205ENST00000464539 RB1CC1Q8TDY2 1594 aa20.67■□□□□ 0.9
TNRC6A-205ENST00000464539 NACADO15069 1562 aa20.4■□□□□ 0.86
TNRC6A-205ENST00000464539 PABPN1Q86U42 306 aaKnown RBP eCLIP20.3■□□□□ 0.845e-7■□□□□ 8
TNRC6A-205ENST00000464539 UNC13AQ9UPW8 1703 aa20.11■□□□□ 0.81
TNRC6A-205ENST00000464539 DCAF8L2P0C7V8 631 aa20.09■□□□□ 0.81
TNRC6A-205ENST00000464539 BICRAQ9NZM4 1560 aa20.05■□□□□ 0.8
TNRC6A-205ENST00000464539 MYO15BQ96JP2 1530 aa19.96■□□□□ 0.79
TNRC6A-205ENST00000464539 CECR2Q9BXF3 1484 aa19.84■□□□□ 0.77
TNRC6A-205ENST00000464539 SHROOM4Q9ULL8 1493 aa19.82■□□□□ 0.76
TNRC6A-205ENST00000464539 DNAJC5Q9H3Z4 198 aa19.79■□□□□ 0.76
TNRC6A-205ENST00000464539 CC2D2AQ9P2K1 1620 aa19.78■□□□□ 0.76
TNRC6A-205ENST00000464539 EIF4G1Q04637 1599 aaKnown RBP19.62■□□□□ 0.73
TNRC6A-205ENST00000464539 DCAF1Q9Y4B6 1507 aa19.48■□□□□ 0.71
TNRC6A-205ENST00000464539 SCRIBQ14160 1630 aa19.44■□□□□ 0.7
TNRC6A-205ENST00000464539 ZCCHC6Q5VYS8 1495 aaKnown RBP19.43■□□□□ 0.7
TNRC6A-205ENST00000464539 HRCP23327 699 aa19.41■□□□□ 0.7
TNRC6A-205ENST00000464539 CUX2O14529 1486 aa19.2■□□□□ 0.66
TNRC6A-205ENST00000464539 PELP1Q8IZL8 1130 aaKnown RBP19.12■□□□□ 0.65
TNRC6A-205ENST00000464539 ERCC6Q03468 1493 aa19.01■□□□□ 0.63
TNRC6A-205ENST00000464539 NCAPD3P42695 1498 aa18.83■□□□□ 0.61
TNRC6A-205ENST00000464539 PCGF6Q9BYE7 350 aa18.77■□□□□ 0.6
TNRC6A-205ENST00000464539 SUPT5HO00267 1087 aaKnown RBP18.75■□□□□ 0.59
TNRC6A-205ENST00000464539 CHIC1Q5VXU3 224 aa18.69■□□□□ 0.58
TNRC6A-205ENST00000464539 ATAD2BQ9ULI0 1458 aa18.67■□□□□ 0.58
TNRC6A-205ENST00000464539 PPARGC1BQ86YN6 1023 aaKnown RBP18.67■□□□□ 0.58
TNRC6A-205ENST00000464539 NESP48681 1621 aa18.66■□□□□ 0.58
TNRC6A-205ENST00000464539 TRIM41Q8WV44 630 aa18.66■□□□□ 0.58
TNRC6A-205ENST00000464539 HMGXB3Q12766 1538 aa18.65■□□□□ 0.58
TNRC6A-205ENST00000464539 SMARCA2P51531 1590 aa18.62■□□□□ 0.57
TNRC6A-205ENST00000464539 THOC2Q8NI27 1593 aaKnown RBP18.62■□□□□ 0.57
TNRC6A-205ENST00000464539 MYT1Q01538 1121 aa18.54■□□□□ 0.56
TNRC6A-205ENST00000464539 SMARCA4P51532 1647 aa18.51■□□□□ 0.55
TNRC6A-205ENST00000464539 LAMC3Q9Y6N6 1575 aa18.5■□□□□ 0.55
TNRC6A-205ENST00000464539 BAZ1BQ9UIG0 1483 aaKnown RBP18.47■□□□□ 0.55
TNRC6A-205ENST00000464539 ZEB1P37275 1124 aaPredicted RBP18.46■□□□□ 0.55
TNRC6A-205ENST00000464539 PDS5BQ9NTI5 1447 aa18.42■□□□□ 0.54
TNRC6A-205ENST00000464539 TRIM26Q12899 539 aaPredicted RBP18.41■□□□□ 0.54
TNRC6A-205ENST00000464539 KIF21AQ7Z4S6 1674 aa18.39■□□□□ 0.53
TNRC6A-205ENST00000464539 BAZ1AQ9NRL2 1556 aaPredicted RBP18.36■□□□□ 0.53
TNRC6A-205ENST00000464539 PEG3Q9GZU2 1588 aa18.35■□□□□ 0.53
TNRC6A-205ENST00000464539 MRC2Q9UBG0 1479 aa18.29■□□□□ 0.52
TNRC6A-205ENST00000464539 SCAF1Q9H7N4 1312 aaKnown RBP18.26■□□□□ 0.51
TNRC6A-205ENST00000464539 WDR62O43379 1518 aa18.26■□□□□ 0.51
TNRC6A-205ENST00000464539 CADPSQ9ULU8 1353 aa18.22■□□□□ 0.51
TNRC6A-205ENST00000464539 OSCARQ8IYS5 282 aa18.2■□□□□ 0.5
TNRC6A-205ENST00000464539 MROH2BQ7Z745 1585 aa18.13■□□□□ 0.49
TNRC6A-205ENST00000464539 CEP164Q9UPV0 1460 aa18.1■□□□□ 0.49
TNRC6A-205ENST00000464539 LOC105371045A0A1W2PR82 267 aa18.06■□□□□ 0.48
TNRC6A-205ENST00000464539 FANCD2Q9BXW9 1451 aa18.02■□□□□ 0.47
TNRC6A-205ENST00000464539 RIMBP3CA6NJZ7 1639 aa18■□□□□ 0.47
TNRC6A-205ENST00000464539 RIMBP3BA6NNM3 1639 aa18■□□□□ 0.47
TNRC6A-205ENST00000464539 RIMBP3Q9UFD9 1639 aa18■□□□□ 0.47
TNRC6A-205ENST00000464539 ACIN1Q9UKV3 1341 aaKnown RBP17.94■□□□□ 0.46
TNRC6A-205ENST00000464539 CFTRP13569 1480 aa17.9■□□□□ 0.46
TNRC6A-205ENST00000464539 ARHGEF11O15085 1522 aa17.9■□□□□ 0.46
TNRC6A-205ENST00000464539 URB2Q14146 1524 aaKnown RBP17.89■□□□□ 0.45
TNRC6A-205ENST00000464539 WIZO95785 1651 aa17.87■□□□□ 0.45
TNRC6A-205ENST00000464539 CENPBP07199 599 aaPredicted RBP17.78■□□□□ 0.44
TNRC6A-205ENST00000464539 TRHP20396 242 aaPredicted RBP17.78■□□□□ 0.44
TNRC6A-205ENST00000464539 CYB5RLQ6IPT4 315 aa17.78■□□□□ 0.44
TNRC6A-205ENST00000464539 IFT140Q96RY7 1462 aa17.76■□□□□ 0.43
TNRC6A-205ENST00000464539 ZNF608Q9ULD9 1512 aaPredicted RBP17.74■□□□□ 0.43
TNRC6A-205ENST00000464539 NEUROD1Q13562 356 aa17.73■□□□□ 0.43
TNRC6A-205ENST00000464539 AEBP2Q6ZN18 517 aaPredicted RBP17.7■□□□□ 0.42
TNRC6A-205ENST00000464539 ARAP1Q96P48 1450 aa17.68■□□□□ 0.42
TNRC6A-205ENST00000464539 GTF3C3Q9Y5Q9 886 aa17.67■□□□□ 0.42
TNRC6A-205ENST00000464539 TOP2AP11388 1531 aaKnown RBP17.66■□□□□ 0.42
TNRC6A-205ENST00000464539 PRDM2Q13029 1718 aa17.64■□□□□ 0.41
TNRC6A-205ENST00000464539 RSF1Q96T23 1441 aaPredicted RBP17.63■□□□□ 0.41
TNRC6A-205ENST00000464539 EIF4G3O43432 1585 aaKnown RBP17.63■□□□□ 0.41
TNRC6A-205ENST00000464539 TOPBP1Q92547 1522 aa17.6■□□□□ 0.41
TNRC6A-205ENST00000464539 CHD1O14646 1710 aa17.58■□□□□ 0.41
TNRC6A-205ENST00000464539 ABCC8Q09428 1581 aa17.57■□□□□ 0.4
TNRC6A-205ENST00000464539 DIEXFQ68CQ4 756 aaKnown RBP17.54■□□□□ 0.4
TNRC6A-205ENST00000464539 AQRO60306 1485 aaKnown RBP eCLIP17.51■□□□□ 0.39
TNRC6A-205ENST00000464539 FBLN2P98095 1184 aa17.51■□□□□ 0.39
TNRC6A-205ENST00000464539 DNMBPQ6XZF7 1577 aa17.5■□□□□ 0.39
TNRC6A-205ENST00000464539 TARBP1Q13395 1621 aaKnown RBP17.48■□□□□ 0.39
TNRC6A-205ENST00000464539 TTBK1Q5TCY1 1321 aaPredicted RBP17.45■□□□□ 0.38
TNRC6A-205ENST00000464539 CCER1Q8TC90 406 aaPredicted RBP17.45■□□□□ 0.38
TNRC6A-205ENST00000464539 CCDC88BA6NC98 1476 aa17.43■□□□□ 0.38
TNRC6A-205ENST00000464539 CLASP1Q7Z460 1538 aa17.41■□□□□ 0.38
TNRC6A-205ENST00000464539 POLA1P09884 1462 aaPredicted RBP17.38■□□□□ 0.37
TNRC6A-205ENST00000464539 SYNJ1O43426 1573 aa17.36■□□□□ 0.37
TNRC6A-205ENST00000464539 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.35■□□□□ 0.37
TNRC6A-205ENST00000464539 SNAPC4Q5SXM2 1469 aa17.34■□□□□ 0.37
TNRC6A-205ENST00000464539 WDR97A6NE52 1622 aa17.32■□□□□ 0.36
TNRC6A-205ENST00000464539 TDRD9Q8NDG6 1382 aaKnown RBP17.31■□□□□ 0.36
TNRC6A-205ENST00000464539 CHMP7Q8WUX9 453 aaPredicted RBP17.31■□□□□ 0.36
TNRC6A-205ENST00000464539 RAD54L2Q9Y4B4 1467 aa17.3■□□□□ 0.36
TNRC6A-205ENST00000464539 SOGA1O94964 1423 aa17.3■□□□□ 0.36
TNRC6A-205ENST00000464539 MAGI1Q96QZ7 1491 aaPredicted RBP17.3■□□□□ 0.36
TNRC6A-205ENST00000464539 ZNF316A6NFI3 1004 aaPredicted RBP17.27■□□□□ 0.36
TNRC6A-205ENST00000464539 GAPVD1Q14C86 1478 aa17.27■□□□□ 0.36
TNRC6A-205ENST00000464539 FAM9AQ8IZU1 332 aaPredicted RBP17.25■□□□□ 0.35
TNRC6A-205ENST00000464539 SYNJ2O15056 1496 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms