RNA–Protein interactions for RNA: ENST00000336714.7

SEC23B-202, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-202ENST00000336714 NISCHQ9Y2I1 1504 aa19.44■□□□□ 0.7
SEC23B-202ENST00000336714 PPARGC1BQ86YN6 1023 aaKnown RBP18.83■□□□□ 0.6
SEC23B-202ENST00000336714 HRCP23327 699 aa18.81■□□□□ 0.6
SEC23B-202ENST00000336714 PCGF6Q9BYE7 350 aa18.64■□□□□ 0.57
SEC23B-202ENST00000336714 SUPT5HO00267 1087 aaKnown RBP18.46■□□□□ 0.55
SEC23B-202ENST00000336714 SHROOM4Q9ULL8 1493 aa18.39■□□□□ 0.53
SEC23B-202ENST00000336714 PELP1Q8IZL8 1130 aaKnown RBP18.36■□□□□ 0.53
SEC23B-202ENST00000336714 SCAF1Q9H7N4 1312 aaKnown RBP18.1■□□□□ 0.49
SEC23B-202ENST00000336714 MYO15BQ96JP2 1530 aa17.97■□□□□ 0.47
SEC23B-202ENST00000336714 CHIC1Q5VXU3 224 aa17.85■□□□□ 0.45
SEC23B-202ENST00000336714 LOC105371045A0A1W2PR82 267 aa17.8■□□□□ 0.44
SEC23B-202ENST00000336714 MYT1Q01538 1121 aa17.62■□□□□ 0.41
SEC23B-202ENST00000336714 TRIM26Q12899 539 aaPredicted RBP17.6■□□□□ 0.41
SEC23B-202ENST00000336714 NEUROD1Q13562 356 aa17.56■□□□□ 0.4
SEC23B-202ENST00000336714 GTF3C3Q9Y5Q9 886 aa17.54■□□□□ 0.4
SEC23B-202ENST00000336714 EHMT2Q96KQ7 1210 aa17.49■□□□□ 0.39
SEC23B-202ENST00000336714 ACIN1Q9UKV3 1341 aaKnown RBP17.47■□□□□ 0.39
SEC23B-202ENST00000336714 ZEB1P37275 1124 aaPredicted RBP17.41■□□□□ 0.38
SEC23B-202ENST00000336714 DCAF1Q9Y4B6 1507 aa17.32■□□□□ 0.36
SEC23B-202ENST00000336714 DCAF8L2P0C7V8 631 aa17.3■□□□□ 0.36
SEC23B-202ENST00000336714 YTHDC1Q96MU7 727 aaKnown RBP17.28■□□□□ 0.36
SEC23B-202ENST00000336714 CENPBP07199 599 aaPredicted RBP17.25■□□□□ 0.35
SEC23B-202ENST00000336714 FAM9AQ8IZU1 332 aaPredicted RBP17.22■□□□□ 0.35
SEC23B-202ENST00000336714 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.18■□□□□ 0.34
SEC23B-202ENST00000336714 DIEXFQ68CQ4 756 aaKnown RBP17.13■□□□□ 0.33
SEC23B-202ENST00000336714 CCER1Q8TC90 406 aaPredicted RBP17.1■□□□□ 0.33
SEC23B-202ENST00000336714 CCDC180Q9P1Z9 1646 aa17.1■□□□□ 0.33
SEC23B-202ENST00000336714 TTBK1Q5TCY1 1321 aaPredicted RBP17.06■□□□□ 0.32
SEC23B-202ENST00000336714 BCL11AQ9H165 835 aa16.91■□□□□ 0.3
SEC23B-202ENST00000336714 TRIM41Q8WV44 630 aa16.79■□□□□ 0.28
SEC23B-202ENST00000336714 MIER1Q8N108 512 aa16.7■□□□□ 0.26
SEC23B-202ENST00000336714 CSRNP3Q8WYN3 585 aa16.62■□□□□ 0.25
SEC23B-202ENST00000336714 ANP32EQ9BTT0 268 aa16.61■□□□□ 0.25
SEC23B-202ENST00000336714 ZNF316A6NFI3 1004 aaPredicted RBP16.6■□□□□ 0.25
SEC23B-202ENST00000336714 BCANQ96GW7 911 aa16.52■□□□□ 0.24
SEC23B-202ENST00000336714 ZCCHC6Q5VYS8 1495 aaKnown RBP16.51■□□□□ 0.23
SEC23B-202ENST00000336714 TSHZ2Q9NRE2 1034 aa16.48■□□□□ 0.23
SEC23B-202ENST00000336714 SUPT16HQ9Y5B9 1047 aaKnown RBP16.48■□□□□ 0.23
SEC23B-202ENST00000336714 PRKCSHP14314 528 aaPredicted RBP16.38■□□□□ 0.21
SEC23B-202ENST00000336714 HNRNPUL2Q1KMD3 747 aaKnown RBP16.35■□□□□ 0.21
SEC23B-202ENST00000336714 ITGAEP38570 1179 aa16.2■□□□□ 0.18
SEC23B-202ENST00000336714 FKBP8Q14318 412 aa16.16■□□□□ 0.18
SEC23B-202ENST00000336714 KCNH8Q96L42 1107 aa16.12■□□□□ 0.17
SEC23B-202ENST00000336714 RBM19Q9Y4C8 960 aaKnown RBP16.1■□□□□ 0.17
SEC23B-202ENST00000336714 ERICH6Q7L0X2 663 aa16.09■□□□□ 0.17
SEC23B-202ENST00000336714 RANGAP1P46060 587 aaPredicted RBP16.06■□□□□ 0.16
SEC23B-202ENST00000336714 UBTFP17480 764 aaKnown RBP16.04■□□□□ 0.16
SEC23B-202ENST00000336714 MSH5O43196 834 aa15.98■□□□□ 0.15
SEC23B-202ENST00000336714 ANO8Q9HCE9 1232 aaPredicted RBP15.97■□□□□ 0.15
SEC23B-202ENST00000336714 CLSPNQ9HAW4 1339 aa15.97■□□□□ 0.15
SEC23B-202ENST00000336714 NEFLP07196 543 aa15.96■□□□□ 0.15
SEC23B-202ENST00000336714 RB1CC1Q8TDY2 1594 aa15.96■□□□□ 0.14
SEC23B-202ENST00000336714 RSF1Q96T23 1441 aaPredicted RBP15.94■□□□□ 0.14
SEC23B-202ENST00000336714 TRIM52Q96A61 297 aa15.91■□□□□ 0.14
SEC23B-202ENST00000336714 IRX6P78412 446 aaPredicted RBP15.89■□□□□ 0.13
SEC23B-202ENST00000336714 CCDC136Q96JN2 1154 aa15.88■□□□□ 0.13
SEC23B-202ENST00000336714 CEP162Q5TB80 1403 aa15.86■□□□□ 0.13
SEC23B-202ENST00000336714 NBR1Q14596 966 aa15.85■□□□□ 0.13
SEC23B-202ENST00000336714 DEKP35659 375 aaKnown RBP15.85■□□□□ 0.13
SEC23B-202ENST00000336714 RTN4Q9NQC3 1192 aaKnown RBP15.8■□□□□ 0.12
SEC23B-202ENST00000336714 APLP2Q06481 763 aa15.79■□□□□ 0.12
SEC23B-202ENST00000336714 DDX10Q13206 875 aaKnown RBP15.78■□□□□ 0.12
SEC23B-202ENST00000336714 HIRIP3Q9BW71 556 aaPredicted RBP15.77■□□□□ 0.11
SEC23B-202ENST00000336714 SALL2Q9Y467 1007 aaPredicted RBP15.77■□□□□ 0.11
SEC23B-202ENST00000336714 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.74■□□□□ 0.11
SEC23B-202ENST00000336714 ABCC9O60706 1549 aa15.71■□□□□ 0.11
SEC23B-202ENST00000336714 CDK11AQ9UQ88 783 aaPredicted RBP15.69■□□□□ 0.1
SEC23B-202ENST00000336714 WRNQ14191 1432 aaPredicted RBP eCLIP15.67■□□□□ 0.1
SEC23B-202ENST00000336714 SOGA1O94964 1423 aa15.64■□□□□ 0.09
SEC23B-202ENST00000336714 SCRIBQ14160 1630 aa15.61■□□□□ 0.09
SEC23B-202ENST00000336714 CCDC88BA6NC98 1476 aa15.59■□□□□ 0.09
SEC23B-202ENST00000336714 IL27Q8NEV9 243 aa15.59■□□□□ 0.09
SEC23B-202ENST00000336714 ABCC8Q09428 1581 aa15.57■□□□□ 0.08
SEC23B-202ENST00000336714 TNIKQ9UKE5 1360 aa15.56■□□□□ 0.08
SEC23B-202ENST00000336714 FANCIQ9NVI1 1328 aa15.55■□□□□ 0.08
SEC23B-202ENST00000336714 DHX57Q6P158 1386 aaKnown RBP15.55■□□□□ 0.08
SEC23B-202ENST00000336714 RUSC2Q8N2Y8 1516 aa15.54■□□□□ 0.08
SEC23B-202ENST00000336714 PAK3O75914 559 aaPredicted RBP15.53■□□□□ 0.08
SEC23B-202ENST00000336714 CECR2Q9BXF3 1484 aa15.52■□□□□ 0.08
SEC23B-202ENST00000336714 HNRNPUQ00839 825 aaKnown RBP eCLIP15.52■□□□□ 0.07
SEC23B-202ENST00000336714 EIF5BO60841 1220 aaKnown RBP15.5■□□□□ 0.07
SEC23B-202ENST00000336714 B4GALNT3Q6L9W6 998 aa15.5■□□□□ 0.07
SEC23B-202ENST00000336714 RTL5Q5HYW3 569 aaPredicted RBP15.49■□□□□ 0.07
SEC23B-202ENST00000336714 ANP32CO43423 234 aa15.48■□□□□ 0.07
SEC23B-202ENST00000336714 NOP58Q9Y2X3 529 aaKnown RBP15.46■□□□□ 0.07
SEC23B-202ENST00000336714 SIN3AQ96ST3 1273 aa15.45■□□□□ 0.06
SEC23B-202ENST00000336714 MYT1LQ9UL68 1186 aa15.43■□□□□ 0.06
SEC23B-202ENST00000336714 CLIP1P30622 1438 aa15.4■□□□□ 0.06
SEC23B-202ENST00000336714 SENP3-EIF4A1A0A087X0R7 540 aa15.4■□□□□ 0.06
SEC23B-202ENST00000336714 CNGB1Q14028 1251 aaPredicted RBP15.4■□□□□ 0.06
SEC23B-202ENST00000336714 MROH2BQ7Z745 1585 aa15.39■□□□□ 0.05
SEC23B-202ENST00000336714 KANK4Q5T7N3 995 aaPredicted RBP15.37■□□□□ 0.05
SEC23B-202ENST00000336714 NPM2Q86SE8 214 aaKnown RBP15.37■□□□□ 0.05
SEC23B-202ENST00000336714 WIZO95785 1651 aa15.34■□□□□ 0.05
SEC23B-202ENST00000336714 LAS1LQ9Y4W2 734 aaKnown RBP15.34■□□□□ 0.05
SEC23B-202ENST00000336714 BAZ1BQ9UIG0 1483 aaKnown RBP15.34■□□□□ 0.05
SEC23B-202ENST00000336714 GOLGA3Q08378 1498 aa15.33■□□□□ 0.05
SEC23B-202ENST00000336714 PPP1R15AO75807 674 aaPredicted RBP15.3■□□□□ 0.04
SEC23B-202ENST00000336714 ZBTB47Q9UFB7 747 aaPredicted RBP15.29■□□□□ 0.04
SEC23B-202ENST00000336714 PPP4R2Q9NY27 417 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 214.2 ms