RNA–Protein interactions for RNA: ENST00000262544.6

SEC23B-201, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEC23B, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-201ENST00000262544 NISCHQ9Y2I1 1504 aa25.64■■□□□ 1.69
SEC23B-201ENST00000262544 SHROOM4Q9ULL8 1493 aa23.03■■□□□ 1.28
SEC23B-201ENST00000262544 SUPT5HO00267 1087 aaKnown RBP22.7■■□□□ 1.22
SEC23B-201ENST00000262544 DCAF8L2P0C7V8 631 aa22.57■■□□□ 1.2
SEC23B-201ENST00000262544 CCDC180Q9P1Z9 1646 aa22.13■■□□□ 1.13
SEC23B-201ENST00000262544 CHIC1Q5VXU3 224 aa21.63■■□□□ 1.05
SEC23B-201ENST00000262544 ZCCHC6Q5VYS8 1495 aaKnown RBP21.61■■□□□ 1.05
SEC23B-201ENST00000262544 PCGF6Q9BYE7 350 aa21.55■■□□□ 1.04
SEC23B-201ENST00000262544 MYO15BQ96JP2 1530 aa21.5■■□□□ 1.03
SEC23B-201ENST00000262544 LOC105371045A0A1W2PR82 267 aa21.4■■□□□ 1.02
SEC23B-201ENST00000262544 EHMT2Q96KQ7 1210 aa21.36■■□□□ 1.01
SEC23B-201ENST00000262544 PPARGC1BQ86YN6 1023 aaKnown RBP21.26■□□□□ 0.99
SEC23B-201ENST00000262544 HRCP23327 699 aa21.2■□□□□ 0.98
SEC23B-201ENST00000262544 FAM9AQ8IZU1 332 aaPredicted RBP21.14■□□□□ 0.98
SEC23B-201ENST00000262544 DCAF1Q9Y4B6 1507 aa21.1■□□□□ 0.97
SEC23B-201ENST00000262544 TRIM41Q8WV44 630 aa20.85■□□□□ 0.93
SEC23B-201ENST00000262544 SCRIBQ14160 1630 aa20.72■□□□□ 0.91
SEC23B-201ENST00000262544 TRIM26Q12899 539 aaPredicted RBP20.67■□□□□ 0.9
SEC23B-201ENST00000262544 TTBK1Q5TCY1 1321 aaPredicted RBP20.62■□□□□ 0.89
SEC23B-201ENST00000262544 ABCC9O60706 1549 aa20.59■□□□□ 0.89
SEC23B-201ENST00000262544 RSF1Q96T23 1441 aaPredicted RBP20.54■□□□□ 0.88
SEC23B-201ENST00000262544 NACADO15069 1562 aa20.5■□□□□ 0.87
SEC23B-201ENST00000262544 RB1CC1Q8TDY2 1594 aa20.38■□□□□ 0.85
SEC23B-201ENST00000262544 CECR2Q9BXF3 1484 aa20.34■□□□□ 0.85
SEC23B-201ENST00000262544 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.24■□□□□ 0.83
SEC23B-201ENST00000262544 MROH2BQ7Z745 1585 aa20.14■□□□□ 0.81
SEC23B-201ENST00000262544 CCER1Q8TC90 406 aaPredicted RBP20.13■□□□□ 0.81
SEC23B-201ENST00000262544 ZEB1P37275 1124 aaPredicted RBP20.1■□□□□ 0.81
SEC23B-201ENST00000262544 RANGAP1P46060 587 aaPredicted RBP20.07■□□□□ 0.8
SEC23B-201ENST00000262544 PABPN1Q86U42 306 aaKnown RBP eCLIP20.05■□□□□ 0.8
SEC23B-201ENST00000262544 WIZO95785 1651 aa20.03■□□□□ 0.8
SEC23B-201ENST00000262544 UBTFP17480 764 aaKnown RBP20■□□□□ 0.79
SEC23B-201ENST00000262544 PELP1Q8IZL8 1130 aaKnown RBP20■□□□□ 0.79
SEC23B-201ENST00000262544 UNC13AQ9UPW8 1703 aa19.88■□□□□ 0.77
SEC23B-201ENST00000262544 ABCC8Q09428 1581 aa19.85■□□□□ 0.77
SEC23B-201ENST00000262544 SCAF1Q9H7N4 1312 aaKnown RBP19.81■□□□□ 0.76
SEC23B-201ENST00000262544 CCDC88BA6NC98 1476 aa19.77■□□□□ 0.76
SEC23B-201ENST00000262544 HNRNPUL2Q1KMD3 747 aaKnown RBP19.75■□□□□ 0.75
SEC23B-201ENST00000262544 SOGA1O94964 1423 aa19.75■□□□□ 0.75
SEC23B-201ENST00000262544 YTHDC1Q96MU7 727 aaKnown RBP19.69■□□□□ 0.74
SEC23B-201ENST00000262544 CSRNP3Q8WYN3 585 aa19.67■□□□□ 0.74
SEC23B-201ENST00000262544 DIEXFQ68CQ4 756 aaKnown RBP19.67■□□□□ 0.74
SEC23B-201ENST00000262544 BICRAQ9NZM4 1560 aa19.65■□□□□ 0.74
SEC23B-201ENST00000262544 RUSC2Q8N2Y8 1516 aa19.65■□□□□ 0.74
SEC23B-201ENST00000262544 BAZ1AQ9NRL2 1556 aaPredicted RBP19.64■□□□□ 0.73
SEC23B-201ENST00000262544 CEP162Q5TB80 1403 aa19.62■□□□□ 0.73
SEC23B-201ENST00000262544 NEUROD1Q13562 356 aa19.6■□□□□ 0.73
SEC23B-201ENST00000262544 APLP2Q06481 763 aa19.52■□□□□ 0.72
SEC23B-201ENST00000262544 GTF3C3Q9Y5Q9 886 aa19.49■□□□□ 0.71
SEC23B-201ENST00000262544 ACIN1Q9UKV3 1341 aaKnown RBP19.46■□□□□ 0.71
SEC23B-201ENST00000262544 TOP2AP11388 1531 aaKnown RBP19.46■□□□□ 0.71
SEC23B-201ENST00000262544 SMARCA4P51532 1647 aa19.46■□□□□ 0.71
SEC23B-201ENST00000262544 SMARCA2P51531 1590 aa19.44■□□□□ 0.7
SEC23B-201ENST00000262544 CENPBP07199 599 aaPredicted RBP19.4■□□□□ 0.7
SEC23B-201ENST00000262544 TNIKQ9UKE5 1360 aa19.39■□□□□ 0.7
SEC23B-201ENST00000262544 WRNQ14191 1432 aaPredicted RBP eCLIP19.37■□□□□ 0.69
SEC23B-201ENST00000262544 ITGAEP38570 1179 aa19.36■□□□□ 0.69
SEC23B-201ENST00000262544 EIF4G1Q04637 1599 aaKnown RBP19.34■□□□□ 0.69
SEC23B-201ENST00000262544 ZNF316A6NFI3 1004 aaPredicted RBP19.33■□□□□ 0.68
SEC23B-201ENST00000262544 PEG3Q9GZU2 1588 aa19.32■□□□□ 0.68
SEC23B-201ENST00000262544 GOLGA3Q08378 1498 aa19.28■□□□□ 0.68
SEC23B-201ENST00000262544 MIER1Q8N108 512 aa19.26■□□□□ 0.67
SEC23B-201ENST00000262544 CLIP1P30622 1438 aa19.26■□□□□ 0.67
SEC23B-201ENST00000262544 MYT1Q01538 1121 aa19.18■□□□□ 0.66
SEC23B-201ENST00000262544 ATP1B4Q9UN42 357 aaPredicted RBP19.17■□□□□ 0.66
SEC23B-201ENST00000262544 RAPGEF2Q9Y4G8 1499 aa19.16■□□□□ 0.66
SEC23B-201ENST00000262544 EEA1Q15075 1411 aa19.16■□□□□ 0.66
SEC23B-201ENST00000262544 SYNJ1O43426 1573 aa19.14■□□□□ 0.66
SEC23B-201ENST00000262544 BAZ1BQ9UIG0 1483 aaKnown RBP19.14■□□□□ 0.65
SEC23B-201ENST00000262544 CEP164Q9UPV0 1460 aa19.12■□□□□ 0.65
SEC23B-201ENST00000262544 KANK4Q5T7N3 995 aaPredicted RBP19.1■□□□□ 0.65
SEC23B-201ENST00000262544 ATAD2BQ9ULI0 1458 aa19.06■□□□□ 0.64
SEC23B-201ENST00000262544 P3H3Q8IVL6 736 aa19.03■□□□□ 0.64
SEC23B-201ENST00000262544 VPS8Q8N3P4 1428 aa19.02■□□□□ 0.64
SEC23B-201ENST00000262544 HMGXB3Q12766 1538 aa18.93■□□□□ 0.62
SEC23B-201ENST00000262544 NCAPD3P42695 1498 aa18.89■□□□□ 0.62
SEC23B-201ENST00000262544 FAM50AQ14320 339 aaKnown RBP18.89■□□□□ 0.61
SEC23B-201ENST00000262544 KIF21BO75037 1637 aa18.88■□□□□ 0.61
SEC23B-201ENST00000262544 HIRIP3Q9BW71 556 aaPredicted RBP18.86■□□□□ 0.61
SEC23B-201ENST00000262544 DHX57Q6P158 1386 aaKnown RBP18.78■□□□□ 0.6
SEC23B-201ENST00000262544 KCNH8Q96L42 1107 aa18.77■□□□□ 0.6
SEC23B-201ENST00000262544 ARAP1Q96P48 1450 aa18.77■□□□□ 0.6
SEC23B-201ENST00000262544 SIN3AQ96ST3 1273 aa18.75■□□□□ 0.59
SEC23B-201ENST00000262544 BCANQ96GW7 911 aa18.74■□□□□ 0.59
SEC23B-201ENST00000262544 KIF27Q86VH2 1401 aa18.74■□□□□ 0.59
SEC23B-201ENST00000262544 TOP2BQ02880 1626 aa18.69■□□□□ 0.58
SEC23B-201ENST00000262544 DDX10Q13206 875 aaKnown RBP18.69■□□□□ 0.58
SEC23B-201ENST00000262544 CCNB3Q8WWL7 1395 aa18.67■□□□□ 0.58
SEC23B-201ENST00000262544 CUX1P39880 1505 aa18.67■□□□□ 0.58
SEC23B-201ENST00000262544 CUX2O14529 1486 aa18.67■□□□□ 0.58
SEC23B-201ENST00000262544 PRXQ9BXM0 1461 aa18.65■□□□□ 0.58
SEC23B-201ENST00000262544 ARID3CA6NKF2 412 aa18.63■□□□□ 0.57
SEC23B-201ENST00000262544 CC2D2AQ9P2K1 1620 aa18.63■□□□□ 0.57
SEC23B-201ENST00000262544 RAB3GAP2Q9H2M9 1393 aa18.61■□□□□ 0.57
SEC23B-201ENST00000262544 ARHGAP35Q9NRY4 1499 aa18.59■□□□□ 0.57
SEC23B-201ENST00000262544 CARMIL1Q5VZK9 1371 aa18.56■□□□□ 0.56
SEC23B-201ENST00000262544 SUPT16HQ9Y5B9 1047 aaKnown RBP18.56■□□□□ 0.56
SEC23B-201ENST00000262544 PRDM2Q13029 1718 aa18.55■□□□□ 0.56
SEC23B-201ENST00000262544 IGF1RP08069 1367 aa18.54■□□□□ 0.56
SEC23B-201ENST00000262544 TRIM52Q96A61 297 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms