RNA–Protein interactions for RNA: ENST00000463621.3

CLASP1-209, Transcript of cytoplasmic linker associated protein 1, humanhuman

TSL 4

Gene CLASP1, Length 536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLASP1-209ENST00000463621 NISCHQ9Y2I1 1504 aa13.85□□□□□ -0.19
CLASP1-209ENST00000463621 ABCC9O60706 1549 aa12.98□□□□□ -0.33
CLASP1-209ENST00000463621 DNAJC5BQ9UF47 199 aa12.55□□□□□ -0.4
CLASP1-209ENST00000463621 CCDC180Q9P1Z9 1646 aa12.52□□□□□ -0.4
CLASP1-209ENST00000463621 RB1CC1Q8TDY2 1594 aa12.12□□□□□ -0.47
CLASP1-209ENST00000463621 PABPN1Q86U42 306 aaKnown RBP eCLIP12.07□□□□□ -0.48
CLASP1-209ENST00000463621 DCAF8L2P0C7V8 631 aa11.95□□□□□ -0.5
CLASP1-209ENST00000463621 NACADO15069 1562 aa11.94□□□□□ -0.5
CLASP1-209ENST00000463621 UNC13AQ9UPW8 1703 aa11.89□□□□□ -0.51
CLASP1-209ENST00000463621 BICRAQ9NZM4 1560 aa11.83□□□□□ -0.52
CLASP1-209ENST00000463621 DNAJC5Q9H3Z4 198 aa11.71□□□□□ -0.53
CLASP1-209ENST00000463621 CECR2Q9BXF3 1484 aa11.7□□□□□ -0.54
CLASP1-209ENST00000463621 CC2D2AQ9P2K1 1620 aa11.68□□□□□ -0.54
CLASP1-209ENST00000463621 MYO15BQ96JP2 1530 aa11.61□□□□□ -0.55
CLASP1-209ENST00000463621 EIF4G1Q04637 1599 aaKnown RBP11.54□□□□□ -0.56
CLASP1-209ENST00000463621 SHROOM4Q9ULL8 1493 aa11.51□□□□□ -0.57
CLASP1-209ENST00000463621 SCRIBQ14160 1630 aa11.48□□□□□ -0.57
CLASP1-209ENST00000463621 ZCCHC6Q5VYS8 1495 aaKnown RBP11.38□□□□□ -0.59
CLASP1-209ENST00000463621 DCAF1Q9Y4B6 1507 aa11.35□□□□□ -0.59
CLASP1-209ENST00000463621 CUX2O14529 1486 aa11.25□□□□□ -0.61
CLASP1-209ENST00000463621 ERCC6Q03468 1493 aa11.19□□□□□ -0.62
CLASP1-209ENST00000463621 TRIM41Q8WV44 630 aa11.11□□□□□ -0.63
CLASP1-209ENST00000463621 NESP48681 1621 aa11.06□□□□□ -0.64
CLASP1-209ENST00000463621 NCAPD3P42695 1498 aa11.05□□□□□ -0.64
CLASP1-209ENST00000463621 ATAD2BQ9ULI0 1458 aa10.99□□□□□ -0.65
CLASP1-209ENST00000463621 THOC2Q8NI27 1593 aaKnown RBP10.95□□□□□ -0.66
CLASP1-209ENST00000463621 HMGXB3Q12766 1538 aa10.91□□□□□ -0.66
CLASP1-209ENST00000463621 SMARCA2P51531 1590 aa10.9□□□□□ -0.66
CLASP1-209ENST00000463621 SMARCA4P51532 1647 aa10.87□□□□□ -0.67
CLASP1-209ENST00000463621 KIF21AQ7Z4S6 1674 aa10.87□□□□□ -0.67
CLASP1-209ENST00000463621 BAZ1BQ9UIG0 1483 aaKnown RBP10.86□□□□□ -0.67
CLASP1-209ENST00000463621 LAMC3Q9Y6N6 1575 aa10.83□□□□□ -0.68
CLASP1-209ENST00000463621 PDS5BQ9NTI5 1447 aa10.8□□□□□ -0.68
CLASP1-209ENST00000463621 BAZ1AQ9NRL2 1556 aaPredicted RBP10.74□□□□□ -0.69
CLASP1-209ENST00000463621 MRC2Q9UBG0 1479 aa10.74□□□□□ -0.69
CLASP1-209ENST00000463621 PEG3Q9GZU2 1588 aa10.73□□□□□ -0.69
CLASP1-209ENST00000463621 SLC24A1O60721 1099 aa10.73□□□□□ -0.69
CLASP1-209ENST00000463621 OSCARQ8IYS5 282 aa10.73□□□□□ -0.69
CLASP1-209ENST00000463621 WDR62O43379 1518 aa10.72□□□□□ -0.69
CLASP1-209ENST00000463621 CADPSQ9ULU8 1353 aa10.71□□□□□ -0.69
CLASP1-209ENST00000463621 MROH2BQ7Z745 1585 aa10.7□□□□□ -0.7
CLASP1-209ENST00000463621 RIMBP3CA6NJZ7 1639 aa10.62□□□□□ -0.71
CLASP1-209ENST00000463621 RIMBP3BA6NNM3 1639 aa10.62□□□□□ -0.71
CLASP1-209ENST00000463621 RIMBP3Q9UFD9 1639 aa10.62□□□□□ -0.71
CLASP1-209ENST00000463621 CEP164Q9UPV0 1460 aa10.62□□□□□ -0.71
CLASP1-209ENST00000463621 FANCD2Q9BXW9 1451 aa10.61□□□□□ -0.71
CLASP1-209ENST00000463621 WIZO95785 1651 aa10.56□□□□□ -0.72
CLASP1-209ENST00000463621 ARHGEF11O15085 1522 aa10.55□□□□□ -0.72
CLASP1-209ENST00000463621 URB2Q14146 1524 aaKnown RBP10.55□□□□□ -0.72
CLASP1-209ENST00000463621 CHIC1Q5VXU3 224 aa10.55□□□□□ -0.72
CLASP1-209ENST00000463621 CYB5RLQ6IPT4 315 aa10.55□□□□□ -0.72
CLASP1-209ENST00000463621 TRHP20396 242 aaPredicted RBP10.54□□□□□ -0.72
CLASP1-209ENST00000463621 CFTRP13569 1480 aa10.51□□□□□ -0.73
CLASP1-209ENST00000463621 ZNF608Q9ULD9 1512 aaPredicted RBP10.5□□□□□ -0.73
CLASP1-209ENST00000463621 AEBP2Q6ZN18 517 aaPredicted RBP10.47□□□□□ -0.73
CLASP1-209ENST00000463621 ARAP1Q96P48 1450 aa10.42□□□□□ -0.74
CLASP1-209ENST00000463621 IFT140Q96RY7 1462 aa10.41□□□□□ -0.74
CLASP1-209ENST00000463621 FBLN2P98095 1184 aa10.39□□□□□ -0.75
CLASP1-209ENST00000463621 EIF4G3O43432 1585 aaKnown RBP10.38□□□□□ -0.75
CLASP1-209ENST00000463621 CHD1O14646 1710 aa10.38□□□□□ -0.75
CLASP1-209ENST00000463621 AQRO60306 1485 aaKnown RBP eCLIP10.37□□□□□ -0.751e-8■■■□□ 18.9
CLASP1-209ENST00000463621 TOPBP1Q92547 1522 aa10.36□□□□□ -0.75
CLASP1-209ENST00000463621 TOP2AP11388 1531 aaKnown RBP10.35□□□□□ -0.75
CLASP1-209ENST00000463621 RSF1Q96T23 1441 aaPredicted RBP10.34□□□□□ -0.75
CLASP1-209ENST00000463621 PRDM2Q13029 1718 aa10.33□□□□□ -0.76
CLASP1-209ENST00000463621 TARBP1Q13395 1621 aaKnown RBP10.29□□□□□ -0.76
CLASP1-209ENST00000463621 CCDC88BA6NC98 1476 aa10.29□□□□□ -0.76
CLASP1-209ENST00000463621 DNMBPQ6XZF7 1577 aa10.26□□□□□ -0.77
CLASP1-209ENST00000463621 ABCC8Q09428 1581 aa10.25□□□□□ -0.77
CLASP1-209ENST00000463621 TDRD9Q8NDG6 1382 aaKnown RBP10.25□□□□□ -0.77
CLASP1-209ENST00000463621 RAD54L2Q9Y4B4 1467 aa10.24□□□□□ -0.77
CLASP1-209ENST00000463621 POLA1P09884 1462 aaPredicted RBP10.23□□□□□ -0.77
CLASP1-209ENST00000463621 CLASP1Q7Z460 1538 aa10.23□□□□□ -0.77
CLASP1-209ENST00000463621 CHMP7Q8WUX9 453 aaPredicted RBP10.21□□□□□ -0.77
CLASP1-209ENST00000463621 SNAPC4Q5SXM2 1469 aa10.21□□□□□ -0.78
CLASP1-209ENST00000463621 SOGA1O94964 1423 aa10.19□□□□□ -0.78
CLASP1-209ENST00000463621 SYNJ1O43426 1573 aa10.17□□□□□ -0.78
CLASP1-209ENST00000463621 GAPVD1Q14C86 1478 aa10.17□□□□□ -0.78
CLASP1-209ENST00000463621 MAGI1Q96QZ7 1491 aaPredicted RBP10.13□□□□□ -0.79
CLASP1-209ENST00000463621 FGD5Q6ZNL6 1462 aa10.12□□□□□ -0.79
CLASP1-209ENST00000463621 SYNJ2O15056 1496 aa10.11□□□□□ -0.79
CLASP1-209ENST00000463621 GRIN2BQ13224 1484 aa10.11□□□□□ -0.79
CLASP1-209ENST00000463621 ERCC6L2Q5T890 1561 aa10.11□□□□□ -0.79
CLASP1-209ENST00000463621 ILDR1Q86SU0 546 aaPredicted RBP10.09□□□□□ -0.79
CLASP1-209ENST00000463621 CUX1P39880 1505 aa10.07□□□□□ -0.8
CLASP1-209ENST00000463621 WDR97A6NE52 1622 aa10.07□□□□□ -0.8
CLASP1-209ENST00000463621 PBRM1Q86U86 1689 aa10.05□□□□□ -0.8
CLASP1-209ENST00000463621 EHMT2Q96KQ7 1210 aa10.04□□□□□ -0.8
CLASP1-209ENST00000463621 KIF13AQ9H1H9 1805 aa10.04□□□□□ -0.8
CLASP1-209ENST00000463621 KDM4FA0A1W2PPD8 638 aa10.02□□□□□ -0.81
CLASP1-209ENST00000463621 CEP170Q5SW79 1584 aa10.01□□□□□ -0.81
CLASP1-209ENST00000463621 GRIN2AQ12879 1464 aa9.99□□□□□ -0.81
CLASP1-209ENST00000463621 ABCA5Q8WWZ7 1642 aa9.98□□□□□ -0.81
CLASP1-209ENST00000463621 FAM69CQ0P6D2 419 aa9.98□□□□□ -0.81
CLASP1-209ENST00000463621 NUP160Q12769 1436 aa9.96□□□□□ -0.82
CLASP1-209ENST00000463621 ABCA10Q8WWZ4 1543 aa9.96□□□□□ -0.82
CLASP1-209ENST00000463621 SHROOM2Q13796 1616 aa9.95□□□□□ -0.82
CLASP1-209ENST00000463621 ABCC10Q5T3U5 1492 aa9.93□□□□□ -0.82
CLASP1-209ENST00000463621 PRG4Q92954 1404 aaPredicted RBP9.93□□□□□ -0.82
CLASP1-209ENST00000463621 ADAMTS12P58397 1594 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms