RNA–Protein interactions for RNA: ENST00000518462.1

REPIN1-216, Transcript of replication initiator 1, humanhuman

TSL 4

Gene REPIN1, Length 621 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REPIN1-216ENST00000518462 NISCHQ9Y2I1 1504 aa43.69■■■■■ 4.59
REPIN1-216ENST00000518462 CCDC180Q9P1Z9 1646 aa38.84■■■■□ 3.81
REPIN1-216ENST00000518462 ABCC9O60706 1549 aa37.7■■■■□ 3.63
REPIN1-216ENST00000518462 NACADO15069 1562 aa36.48■■■■□ 3.43
REPIN1-216ENST00000518462 ZCCHC6Q5VYS8 1495 aaKnown RBP36.47■■■■□ 3.43
REPIN1-216ENST00000518462 RB1CC1Q8TDY2 1594 aa36.44■■■■□ 3.42
REPIN1-216ENST00000518462 MYO15BQ96JP2 1530 aa36.42■■■■□ 3.42
REPIN1-216ENST00000518462 DCAF1Q9Y4B6 1507 aa36.28■■■■□ 3.4
REPIN1-216ENST00000518462 DCAF8L2P0C7V8 631 aa36.18■■■■□ 3.38
REPIN1-216ENST00000518462 UNC13AQ9UPW8 1703 aa35.53■■■■□ 3.28
REPIN1-216ENST00000518462 BICRAQ9NZM4 1560 aa35.32■■■■□ 3.24
REPIN1-216ENST00000518462 SCRIBQ14160 1630 aa35.31■■■■□ 3.24
REPIN1-216ENST00000518462 PABPN1Q86U42 306 aaKnown RBP eCLIP35.19■■■■□ 3.22
REPIN1-216ENST00000518462 SHROOM4Q9ULL8 1493 aa35.15■■■■□ 3.22
REPIN1-216ENST00000518462 DNAJC5BQ9UF47 199 aa34.44■■■■□ 3.1
REPIN1-216ENST00000518462 EIF4G1Q04637 1599 aaKnown RBP34.38■■■■□ 3.09
REPIN1-216ENST00000518462 CC2D2AQ9P2K1 1620 aa34.16■■■■□ 3.06
REPIN1-216ENST00000518462 CECR2Q9BXF3 1484 aa33.95■■■■□ 3.02
REPIN1-216ENST00000518462 BAZ1AQ9NRL2 1556 aaPredicted RBP33.88■■■■□ 3.01
REPIN1-216ENST00000518462 SMARCA4P51532 1647 aa33.86■■■■□ 3.01
REPIN1-216ENST00000518462 NCAPD3P42695 1498 aa33.66■■■□□ 2.98
REPIN1-216ENST00000518462 SMARCA2P51531 1590 aa33.65■■■□□ 2.98
REPIN1-216ENST00000518462 ATAD2BQ9ULI0 1458 aa33.65■■■□□ 2.98
REPIN1-216ENST00000518462 PEG3Q9GZU2 1588 aa33.63■■■□□ 2.97
REPIN1-216ENST00000518462 MROH2BQ7Z745 1585 aa33.62■■■□□ 2.97
REPIN1-216ENST00000518462 HMGXB3Q12766 1538 aa33.53■■■□□ 2.96
REPIN1-216ENST00000518462 BAZ1BQ9UIG0 1483 aaKnown RBP33.36■■■□□ 2.93
REPIN1-216ENST00000518462 RSF1Q96T23 1441 aaPredicted RBP33.31■■■□□ 2.92
REPIN1-216ENST00000518462 WIZO95785 1651 aa33.22■■■□□ 2.91
REPIN1-216ENST00000518462 TOP2AP11388 1531 aaKnown RBP32.99■■■□□ 2.87
REPIN1-216ENST00000518462 LAMC3Q9Y6N6 1575 aa32.74■■■□□ 2.83
REPIN1-216ENST00000518462 NESP48681 1621 aa32.66■■■□□ 2.82
REPIN1-216ENST00000518462 CADPSQ9ULU8 1353 aa32.64■■■□□ 2.82
REPIN1-216ENST00000518462 CCDC88BA6NC98 1476 aa32.54■■■□□ 2.8
REPIN1-216ENST00000518462 ERCC6Q03468 1493 aa32.52■■■□□ 2.8
REPIN1-216ENST00000518462 CFTRP13569 1480 aa32.5■■■□□ 2.79
REPIN1-216ENST00000518462 PDS5BQ9NTI5 1447 aa32.49■■■□□ 2.79
REPIN1-216ENST00000518462 SUPT5HO00267 1087 aaKnown RBP32.37■■■□□ 2.77
REPIN1-216ENST00000518462 KIF21AQ7Z4S6 1674 aa32.3■■■□□ 2.76
REPIN1-216ENST00000518462 THOC2Q8NI27 1593 aaKnown RBP32.24■■■□□ 2.75
REPIN1-216ENST00000518462 CUX2O14529 1486 aa32.24■■■□□ 2.75
REPIN1-216ENST00000518462 FANCD2Q9BXW9 1451 aa32.24■■■□□ 2.75
REPIN1-216ENST00000518462 PRDM2Q13029 1718 aa32.23■■■□□ 2.75
REPIN1-216ENST00000518462 CEP164Q9UPV0 1460 aa32.21■■■□□ 2.75
REPIN1-216ENST00000518462 MRC2Q9UBG0 1479 aa32.15■■■□□ 2.74
REPIN1-216ENST00000518462 WDR62O43379 1518 aa32.06■■■□□ 2.72
REPIN1-216ENST00000518462 URB2Q14146 1524 aaKnown RBP31.9■■■□□ 2.7
REPIN1-216ENST00000518462 ABCC8Q09428 1581 aa31.82■■■□□ 2.68
REPIN1-216ENST00000518462 DNMBPQ6XZF7 1577 aa31.75■■■□□ 2.67
REPIN1-216ENST00000518462 TOPBP1Q92547 1522 aa31.75■■■□□ 2.67
REPIN1-216ENST00000518462 IFT140Q96RY7 1462 aa31.55■■■□□ 2.64
REPIN1-216ENST00000518462 CUX1P39880 1505 aa31.54■■■□□ 2.64
REPIN1-216ENST00000518462 POLA1P09884 1462 aaPredicted RBP31.5■■■□□ 2.63
REPIN1-216ENST00000518462 FGD5Q6ZNL6 1462 aa31.41■■■□□ 2.62
REPIN1-216ENST00000518462 WRNQ14191 1432 aaPredicted RBP eCLIP31.41■■■□□ 2.62
REPIN1-216ENST00000518462 TARBP1Q13395 1621 aaKnown RBP31.4■■■□□ 2.62
REPIN1-216ENST00000518462 TOP2BQ02880 1626 aa31.35■■■□□ 2.61
REPIN1-216ENST00000518462 BIVM-ERCC5R4GMW8 1640 aa31.35■■■□□ 2.61
REPIN1-216ENST00000518462 SOGA1O94964 1423 aa31.33■■■□□ 2.61
REPIN1-216ENST00000518462 ZNF608Q9ULD9 1512 aaPredicted RBP31.31■■■□□ 2.6
REPIN1-216ENST00000518462 SYNJ1O43426 1573 aa31.3■■■□□ 2.6
REPIN1-216ENST00000518462 WDR97A6NE52 1622 aa31.29■■■□□ 2.6
REPIN1-216ENST00000518462 RAD54L2Q9Y4B4 1467 aa31.28■■■□□ 2.6
REPIN1-216ENST00000518462 EIF4G3O43432 1585 aaKnown RBP31.24■■■□□ 2.59
REPIN1-216ENST00000518462 ABCA10Q8WWZ4 1543 aa31.18■■■□□ 2.58
REPIN1-216ENST00000518462 AQRO60306 1485 aaKnown RBP eCLIP31.14■■■□□ 2.573e-10■■■■■ 51.1
REPIN1-216ENST00000518462 TDRD9Q8NDG6 1382 aaKnown RBP31.09■■■□□ 2.57
REPIN1-216ENST00000518462 ABCA5Q8WWZ7 1642 aa31.03■■■□□ 2.56
REPIN1-216ENST00000518462 GRIN2BQ13224 1484 aa31■■■□□ 2.55
REPIN1-216ENST00000518462 DNAJC5Q9H3Z4 198 aa30.99■■■□□ 2.55
REPIN1-216ENST00000518462 GAPVD1Q14C86 1478 aa30.99■■■□□ 2.55
REPIN1-216ENST00000518462 MAGI1Q96QZ7 1491 aaPredicted RBP30.94■■■□□ 2.54
REPIN1-216ENST00000518462 SNAPC4Q5SXM2 1469 aa30.9■■■□□ 2.54
REPIN1-216ENST00000518462 PBRM1Q86U86 1689 aa30.89■■■□□ 2.54
REPIN1-216ENST00000518462 ERICH3Q5RHP9 1530 aa30.83■■■□□ 2.53
REPIN1-216ENST00000518462 OSCARQ8IYS5 282 aa30.82■■■□□ 2.52
REPIN1-216ENST00000518462 SYNJ2O15056 1496 aa30.79■■■□□ 2.52
REPIN1-216ENST00000518462 CHD1O14646 1710 aa30.76■■■□□ 2.51
REPIN1-216ENST00000518462 KIF27Q86VH2 1401 aa30.75■■■□□ 2.51
REPIN1-216ENST00000518462 ADAMTS12P58397 1594 aa30.72■■■□□ 2.51
REPIN1-216ENST00000518462 FHAD1B1AJZ9 1412 aa30.68■■■□□ 2.5
REPIN1-216ENST00000518462 CHMP7Q8WUX9 453 aaPredicted RBP30.66■■■□□ 2.5
REPIN1-216ENST00000518462 TRIM41Q8WV44 630 aa30.65■■■□□ 2.5
REPIN1-216ENST00000518462 FBLN2P98095 1184 aa30.63■■■□□ 2.49
REPIN1-216ENST00000518462 GRIN2AQ12879 1464 aa30.6■■■□□ 2.49
REPIN1-216ENST00000518462 IGF1RP08069 1367 aa30.59■■■□□ 2.49
REPIN1-216ENST00000518462 CUL7Q14999 1698 aa30.55■■■□□ 2.48
REPIN1-216ENST00000518462 CLASP1Q7Z460 1538 aa30.53■■■□□ 2.48
REPIN1-216ENST00000518462 NUP160Q12769 1436 aa30.5■■■□□ 2.47
REPIN1-216ENST00000518462 CEP170Q5SW79 1584 aa30.41■■■□□ 2.46
REPIN1-216ENST00000518462 RUSC2Q8N2Y8 1516 aa30.4■■■□□ 2.46
REPIN1-216ENST00000518462 CARMIL1Q5VZK9 1371 aa30.4■■■□□ 2.46
REPIN1-216ENST00000518462 CHIC1Q5VXU3 224 aa30.38■■■□□ 2.45
REPIN1-216ENST00000518462 ARHGEF11O15085 1522 aa30.36■■■□□ 2.45
REPIN1-216ENST00000518462 EEA1Q15075 1411 aa30.32■■■□□ 2.44
REPIN1-216ENST00000518462 RIMBP3CA6NJZ7 1639 aa30.32■■■□□ 2.44
REPIN1-216ENST00000518462 RIMBP3BA6NNM3 1639 aa30.32■■■□□ 2.44
REPIN1-216ENST00000518462 RIMBP3Q9UFD9 1639 aa30.32■■■□□ 2.44
REPIN1-216ENST00000518462 RAPGEF2Q9Y4G8 1499 aa30.26■■■□□ 2.44
REPIN1-216ENST00000518462 SHROOM2Q13796 1616 aa30.24■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms