Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 SRP54-212ENST00000556992 529 ntTSL 25.1□□□□□ -1.593e-75■■■■■ 160.4
U2AF2P26368 NPEPPS-219ENST00000533538 1281 ntTSL 27.85□□□□□ -1.152e-32■■■■■ 141.5
U2AF2P26368 NPEPPS-203ENST00000525021 735 ntTSL 57.85□□□□□ -1.152e-32■■■■■ 141.5
U2AF2P26368 SRCAP-203ENST00000411466 836 ntTSL 325.05■■□□□ 1.67e-16■■■■■ 132.4
U2AF2P26368 TIA1-218ENST00000496096 511 ntTSL 37.94□□□□□ -1.142e-24■■■■■ 126.9
U2AF2P26368 TIA1-212ENST00000477415 510 ntTSL 23.22□□□□□ -1.892e-24■■■■■ 126.9
U2AF2P26368 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC27.09■■□□□ 1.933e-41■■■■■ 120
U2AF2P26368 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC27.09■■□□□ 1.933e-41■■■■■ 120
U2AF2P26368 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC27.09■■□□□ 1.933e-41■■■■■ 120
U2AF2P26368 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC23.92■■□□□ 1.423e-41■■■■■ 120
U2AF2P26368 MPC1-205ENST00000487218 918 ntTSL 56.51□□□□□ -1.373e-41■■■■■ 120
U2AF2P26368 MPC1-203ENST00000366868 572 ntTSL 36.01□□□□□ -1.453e-41■■■■■ 120
U2AF2P26368 MPC1-204ENST00000475708 651 ntTSL 52.62□□□□□ -1.993e-41■■■■■ 120
U2AF2P26368 HACD2-202ENST00000469317 590 ntTSL 316.26■□□□□ 0.194e-14■■■■■ 117
U2AF2P26368 AP002990.1-201ENST00000526409 1954 ntTSL 520.23■□□□□ 0.833e-40■■■■■ 114.3
U2AF2P26368 EEF1G-203ENST00000525340 2496 ntTSL 1 (best)18.88■□□□□ 0.613e-40■■■■■ 114.3
U2AF2P26368 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.193e-40■■■■■ 114.3
U2AF2P26368 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -03e-40■■■■■ 114.3
U2AF2P26368 EEF1G-202ENST00000524420 557 ntTSL 412.82□□□□□ -0.363e-40■■■■■ 114.3
U2AF2P26368 EEF1G-204ENST00000532986 578 ntTSL 412.69□□□□□ -0.383e-40■■■■■ 114.3
U2AF2P26368 ACBD6-203ENST00000440959 2547 ntTSL 210.71□□□□□ -0.696e-26■■■■■ 109.6
U2AF2P26368 ACBD6-205ENST00000496993 672 ntTSL 57□□□□□ -1.296e-26■■■■■ 109.6
U2AF2P26368 LYSMD3-202ENST00000453259 553 ntTSL 315.52■□□□□ 0.083e-31■■■■■ 109.2
U2AF2P26368 LYSMD3-204ENST00000509384 1538 ntTSL 1 (best) BASIC14.53□□□□□ -0.083e-31■■■■■ 109.2
U2AF2P26368 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC8.41□□□□□ -1.063e-31■■■■■ 109.2
U2AF2P26368 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.123e-31■■■■■ 109.2
U2AF2P26368 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC16.95■□□□□ 0.31e-7■■■■■ 102.2
U2AF2P26368 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.061e-7■■■■■ 102.2
U2AF2P26368 SRP54-213ENST00000556994 2327 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.251e-7■■■■■ 102.2
U2AF2P26368 SRP54-208ENST00000555557 1949 ntTSL 2 BASIC11.74□□□□□ -0.531e-7■■■■■ 102.2
U2AF2P26368 AC138393.1-205ENST00000572124 2669 ntTSL 23.46□□□□□ -1.867e-10■■■■■ 102
U2AF2P26368 AC138393.1-204ENST00000449219 758 ntTSL 23.25□□□□□ -1.897e-10■■■■■ 102
U2AF2P26368 TIA1-207ENST00000454815 911 ntTSL 53.15□□□□□ -1.911e-20■■■■■ 98.2
U2AF2P26368 PGK1-203ENST00000476531 960 ntTSL 211.88□□□□□ -0.515e-50■■■■■ 94.5
U2AF2P26368 PGK1-201ENST00000373316 4887 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.555e-50■■■■■ 94.5
U2AF2P26368 WNK1-211ENST00000540360 668 ntTSL 26.71□□□□□ -1.342e-41■■■■■ 90.1
U2AF2P26368 NPEPPS-208ENST00000527298 1569 ntTSL 1 (best)16.09■□□□□ 0.173e-13■■■■■ 90
U2AF2P26368 NPEPPS-225ENST00000602788 4698 ntTSL 58.01□□□□□ -1.133e-13■■■■■ 90
U2AF2P26368 NPEPPS-211ENST00000527964 554 ntTSL 47.56□□□□□ -1.23e-13■■■■■ 90
U2AF2P26368 NPEPPS-224ENST00000534814 512 ntTSL 57.56□□□□□ -1.23e-13■■■■■ 90
U2AF2P26368 NPEPPS-204ENST00000525037 1406 ntTSL 54.97□□□□□ -1.613e-13■■■■■ 90
U2AF2P26368 NPEPPS-209ENST00000527360 534 ntTSL 52.74□□□□□ -1.973e-13■■■■■ 90
U2AF2P26368 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.96□□□□□ -1.623e-19■■■■■ 86.6
U2AF2P26368 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.743e-19■■■■■ 86.6
U2AF2P26368 PPARGC1A-212ENST00000514479 324 ntTSL 21.11□□□□□ -2.231e-19■■■■■ 84.5
U2AF2P26368 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.21■□□□□ 0.511e-7■■■■■ 81.6
U2AF2P26368 C2orf42-212ENST00000470096 579 ntTSL 417.95■□□□□ 0.461e-7■■■■■ 81.6
U2AF2P26368 TIA1-210ENST00000474809 915 ntTSL 514.14□□□□□ -0.151e-7■■■■■ 81.6
U2AF2P26368 TIA1-203ENST00000415783 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.431e-7■■■■■ 81.6
U2AF2P26368 TIA1-205ENST00000433529 4647 ntTSL 2 BASIC12.29□□□□□ -0.441e-7■■■■■ 81.6
U2AF2P26368 TIA1-204ENST00000416149 821 ntTSL 1 (best) BASIC10.7□□□□□ -0.71e-7■■■■■ 81.6
U2AF2P26368 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC8.96□□□□□ -0.981e-7■■■■■ 81.6
U2AF2P26368 TIA1-211ENST00000477044 904 ntTSL 58.75□□□□□ -1.011e-7■■■■■ 81.6
U2AF2P26368 TIA1-202ENST00000361692 543 ntTSL 51.17□□□□□ -2.222e-20■■■■■ 81.6
U2AF2P26368 HACD2-204ENST00000480081 574 ntTSL 413.32□□□□□ -0.282e-6■■■■■ 81.2
U2AF2P26368 AC138393.1-202ENST00000618315 487 ntTSL 1 (best)16.35■□□□□ 0.219e-26■■■■■ 78
U2AF2P26368 AC138393.1-201ENST00000622033 624 ntTSL 5 BASIC14.08□□□□□ -0.169e-26■■■■■ 78
U2AF2P26368 AC138393.1-203ENST00000327086 343 ntBASIC1.84□□□□□ -2.119e-26■■■■■ 78
U2AF2P26368 NPEPPS-201ENST00000322157 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.241e-6■■■■■ 76.7
U2AF2P26368 NPEPPS-216ENST00000530514 2092 ntTSL 210.13□□□□□ -0.791e-6■■■■■ 76.7
U2AF2P26368 NPEPPS-215ENST00000530173 2864 ntTSL 2 BASIC9.25□□□□□ -0.931e-6■■■■■ 76.7
U2AF2P26368 MYO1B-212ENST00000490069 2111 ntTSL 56.56□□□□□ -1.366e-19■■■■■ 71.4
U2AF2P26368 MYO1B-207ENST00000427152 791 ntTSL 21.62□□□□□ -2.156e-19■■■■■ 71.4
U2AF2P26368 FNBP4-202ENST00000524696 481 ntTSL 314.75□□□□□ -0.053e-9■■■■■ 70.5
U2AF2P26368 FNBP4-207ENST00000528388 814 ntTSL 24.29□□□□□ -1.727e-9■■■■■ 70.5
U2AF2P26368 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.021e-7■■■■■ 70.1
U2AF2P26368 BAG6-258ENST00000464126 609 ntTSL 216.64■□□□□ 0.253e-30■■■■■ 70
U2AF2P26368 BAG6-249ENST00000441793 783 ntTSL 213.61□□□□□ -0.233e-30■■■■■ 70
U2AF2P26368 BAG6-238ENST00000422948 513 ntTSL 27.34□□□□□ -1.233e-30■■■■■ 70
U2AF2P26368 MIR15B-201ENST00000385045 98 ntBASIC0.5□□□□□ -2.332e-12■■■■■ 68.9
U2AF2P26368 BUB1B-203ENST00000557848 633 ntTSL 35.22□□□□□ -1.578e-14■■■■■ 68.5
U2AF2P26368 BUB1B-210ENST00000559772 560 ntTSL 42.37□□□□□ -2.038e-14■■■■■ 68.5
U2AF2P26368 BUB1B-209ENST00000559733 786 ntTSL 31.96□□□□□ -2.18e-14■■■■■ 68.5
U2AF2P26368 SNRNP40-204ENST00000474025 581 ntTSL 35.56□□□□□ -1.524e-23■■■■■ 68.3
U2AF2P26368 SATB2-207ENST00000463386 372 ntTSL 412.14□□□□□ -0.474e-11■■■■■ 67.9
U2AF2P26368 OCIAD1-214ENST00000508329 448 ntTSL 50.88□□□□□ -2.273e-19■■■■■ 67.2
U2AF2P26368 RBMX-204ENST00000464781 1852 ntTSL 216.08■□□□□ 0.162e-25■■■■■ 66.7
U2AF2P26368 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC14.62□□□□□ -0.072e-25■■■■■ 66.7
U2AF2P26368 RBMX-201ENST00000320676 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.092e-25■■■■■ 66.7
U2AF2P26368 RBMX-211ENST00000567262 477 ntTSL 513.72□□□□□ -0.212e-25■■■■■ 66.7
U2AF2P26368 RBMX-207ENST00000562646 2148 ntTSL 1 (best) BASIC10.83□□□□□ -0.682e-25■■■■■ 66.7
U2AF2P26368 G6PC-202ENST00000585489 1097 ntTSL 5 BASIC11.86□□□□□ -0.518e-30■■■■■ 66.3
U2AF2P26368 G6PC-204ENST00000592383 987 ntTSL 2 BASIC10.11□□□□□ -0.798e-30■■■■■ 66.3
U2AF2P26368 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.068e-30■■■■■ 66.3
U2AF2P26368 AFDN-215ENST00000497596 728 ntTSL 28.62□□□□□ -1.031e-20■■■■■ 65.8
U2AF2P26368 HNRNPU-225ENST00000640119 461 ntTSL 513.15□□□□□ -0.34e-15■■■■■ 64.4
U2AF2P26368 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.634e-12■■■■■ 63.2
U2AF2P26368 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.14e-12■■■■■ 63.2
U2AF2P26368 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC14.37□□□□□ -0.114e-12■■■■■ 63.2
U2AF2P26368 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.114e-12■■■■■ 63.2
U2AF2P26368 WNK1-204ENST00000530271 11804 ntTSL 1 (best) BASIC12.78□□□□□ -0.364e-12■■■■■ 63.2
U2AF2P26368 FGL1-208ENST00000519055 640 ntTSL 58.8□□□□□ -14e-11■■■■■ 63.1
U2AF2P26368 MUM1-203ENST00000586067 500 ntTSL 425.19■■□□□ 1.623e-14■■■■■ 62.9
U2AF2P26368 MUM1-212ENST00000591453 2453 ntTSL 1 (best)21.09■□□□□ 0.973e-14■■■■■ 62.9
U2AF2P26368 MUM1-207ENST00000588888 1264 ntTSL 320.97■□□□□ 0.953e-14■■■■■ 62.9
U2AF2P26368 MUM1-205ENST00000587460 2793 ntTSL 1 (best)18.03■□□□□ 0.483e-14■■■■■ 62.9
U2AF2P26368 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.443e-14■■■■■ 62.9
U2AF2P26368 MUM1-213ENST00000591627 1461 ntTSL 214.62□□□□□ -0.073e-14■■■■■ 62.9
U2AF2P26368 MUM1-214ENST00000591806 4067 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.263e-14■■■■■ 62.9
U2AF2P26368 MIR17HG-203ENST00000582141 2845 ntTSL 1 (best)21■□□□□ 0.956e-7■■■■■ 62.2
Retrieved 100 of 36,523 protein–RNA pairs in 101.3 ms