RNA–Protein interactions for RNA: ENST00000469309.1

REPIN1-206, Transcript of replication initiator 1, humanhuman

TSL 2

Gene REPIN1, Length 910 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REPIN1-206ENST00000469309 NISCHQ9Y2I1 1504 aa61.26■■■■■ 7.4
REPIN1-206ENST00000469309 CCDC180Q9P1Z9 1646 aa54.89■■■■■ 6.38
REPIN1-206ENST00000469309 ABCC9O60706 1549 aa54.64■■■■■ 6.34
REPIN1-206ENST00000469309 RB1CC1Q8TDY2 1594 aa52.15■■■■■ 5.94
REPIN1-206ENST00000469309 NACADO15069 1562 aa51.84■■■■■ 5.89
REPIN1-206ENST00000469309 DCAF8L2P0C7V8 631 aa51.72■■■■■ 5.87
REPIN1-206ENST00000469309 MYO15BQ96JP2 1530 aa51.17■■■■■ 5.78
REPIN1-206ENST00000469309 UNC13AQ9UPW8 1703 aa50.93■■■■■ 5.74
REPIN1-206ENST00000469309 PABPN1Q86U42 306 aaKnown RBP eCLIP50.91■■■■■ 5.74
REPIN1-206ENST00000469309 DNAJC5BQ9UF47 199 aa50.91■■■■■ 5.74
REPIN1-206ENST00000469309 ZCCHC6Q5VYS8 1495 aaKnown RBP50.82■■■■■ 5.73
REPIN1-206ENST00000469309 DCAF1Q9Y4B6 1507 aa50.62■■■■■ 5.69
REPIN1-206ENST00000469309 BICRAQ9NZM4 1560 aa50.51■■■■■ 5.68
REPIN1-206ENST00000469309 SCRIBQ14160 1630 aa50.05■■■■■ 5.6
REPIN1-206ENST00000469309 SHROOM4Q9ULL8 1493 aa49.95■■■■■ 5.59
REPIN1-206ENST00000469309 CC2D2AQ9P2K1 1620 aa49.36■■■■■ 5.49
REPIN1-206ENST00000469309 EIF4G1Q04637 1599 aaKnown RBP49.32■■■■■ 5.49
REPIN1-206ENST00000469309 CECR2Q9BXF3 1484 aa49.2■■■■■ 5.47
REPIN1-206ENST00000469309 NCAPD3P42695 1498 aa47.81■■■■■ 5.24
REPIN1-206ENST00000469309 SMARCA4P51532 1647 aa47.74■■■■■ 5.23
REPIN1-206ENST00000469309 ATAD2BQ9ULI0 1458 aa47.71■■■■■ 5.23
REPIN1-206ENST00000469309 SMARCA2P51531 1590 aa47.65■■■■■ 5.22
REPIN1-206ENST00000469309 BAZ1AQ9NRL2 1556 aaPredicted RBP47.58■■■■■ 5.21
REPIN1-206ENST00000469309 HMGXB3Q12766 1538 aa47.51■■■■■ 5.2
REPIN1-206ENST00000469309 BAZ1BQ9UIG0 1483 aaKnown RBP47.32■■■■■ 5.17
REPIN1-206ENST00000469309 PEG3Q9GZU2 1588 aa47.25■■■■■ 5.15
REPIN1-206ENST00000469309 ERCC6Q03468 1493 aa47.23■■■■■ 5.15
REPIN1-206ENST00000469309 MROH2BQ7Z745 1585 aa47.19■■■■■ 5.14
REPIN1-206ENST00000469309 CUX2O14529 1486 aa47■■■■■ 5.11
REPIN1-206ENST00000469309 NESP48681 1621 aa46.97■■■■■ 5.11
REPIN1-206ENST00000469309 LAMC3Q9Y6N6 1575 aa46.74■■■■■ 5.07
REPIN1-206ENST00000469309 WIZO95785 1651 aa46.66■■■■■ 5.06
REPIN1-206ENST00000469309 DNAJC5Q9H3Z4 198 aa46.64■■■■■ 5.06
REPIN1-206ENST00000469309 PDS5BQ9NTI5 1447 aa46.49■■■■■ 5.03
REPIN1-206ENST00000469309 THOC2Q8NI27 1593 aaKnown RBP46.45■■■■■ 5.03
REPIN1-206ENST00000469309 KIF21AQ7Z4S6 1674 aa46.42■■■■■ 5.02
REPIN1-206ENST00000469309 CADPSQ9ULU8 1353 aa46.4■■■■■ 5.02
REPIN1-206ENST00000469309 RSF1Q96T23 1441 aaPredicted RBP46.3■■■■■ 5
REPIN1-206ENST00000469309 TOP2AP11388 1531 aaKnown RBP46.11■■■■■ 4.97
REPIN1-206ENST00000469309 MRC2Q9UBG0 1479 aa46.04■■■■■ 4.96
REPIN1-206ENST00000469309 CEP164Q9UPV0 1460 aa45.93■■■■■ 4.94
REPIN1-206ENST00000469309 CFTRP13569 1480 aa45.91■■■■■ 4.94
REPIN1-206ENST00000469309 WDR62O43379 1518 aa45.9■■■■■ 4.94
REPIN1-206ENST00000469309 FANCD2Q9BXW9 1451 aa45.88■■■■■ 4.94
REPIN1-206ENST00000469309 CCDC88BA6NC98 1476 aa45.56■■■■■ 4.88
REPIN1-206ENST00000469309 PRDM2Q13029 1718 aa45.54■■■■■ 4.88
REPIN1-206ENST00000469309 URB2Q14146 1524 aaKnown RBP45.45■■■■■ 4.87
REPIN1-206ENST00000469309 TOPBP1Q92547 1522 aa45.03■■■■■ 4.8
REPIN1-206ENST00000469309 ABCC8Q09428 1581 aa45.01■■■■■ 4.8
REPIN1-206ENST00000469309 IFT140Q96RY7 1462 aa45■■■■■ 4.79
REPIN1-206ENST00000469309 OSCARQ8IYS5 282 aa44.93■■■■■ 4.78
REPIN1-206ENST00000469309 DNMBPQ6XZF7 1577 aa44.91■■■■■ 4.78
REPIN1-206ENST00000469309 ZNF608Q9ULD9 1512 aaPredicted RBP44.85■■■■■ 4.77
REPIN1-206ENST00000469309 TRIM41Q8WV44 630 aa44.79■■■■■ 4.76
REPIN1-206ENST00000469309 EIF4G3O43432 1585 aaKnown RBP44.65■■■■■ 4.74
REPIN1-206ENST00000469309 TARBP1Q13395 1621 aaKnown RBP44.58■■■■■ 4.73
REPIN1-206ENST00000469309 POLA1P09884 1462 aaPredicted RBP44.58■■■■■ 4.73
REPIN1-206ENST00000469309 SUPT5HO00267 1087 aaKnown RBP44.55■■■■■ 4.72
REPIN1-206ENST00000469309 AQRO60306 1485 aaKnown RBP eCLIP44.49■■■■■ 4.716e-14■■■■■ 61.6
REPIN1-206ENST00000469309 SOGA1O94964 1423 aa44.41■■■■■ 4.7
REPIN1-206ENST00000469309 RAD54L2Q9Y4B4 1467 aa44.41■■■■■ 4.7
REPIN1-206ENST00000469309 FGD5Q6ZNL6 1462 aa44.35■■■■■ 4.69
REPIN1-206ENST00000469309 CUX1P39880 1505 aa44.33■■■■■ 4.69
REPIN1-206ENST00000469309 CHD1O14646 1710 aa44.29■■■■■ 4.68
REPIN1-206ENST00000469309 TDRD9Q8NDG6 1382 aaKnown RBP44.28■■■■■ 4.68
REPIN1-206ENST00000469309 RIMBP3CA6NJZ7 1639 aa44.28■■■■■ 4.68
REPIN1-206ENST00000469309 RIMBP3BA6NNM3 1639 aa44.28■■■■■ 4.68
REPIN1-206ENST00000469309 RIMBP3Q9UFD9 1639 aa44.28■■■■■ 4.68
REPIN1-206ENST00000469309 FBLN2P98095 1184 aa44.25■■■■■ 4.67
REPIN1-206ENST00000469309 WDR97A6NE52 1622 aa44.21■■■■■ 4.67
REPIN1-206ENST00000469309 ARHGEF11O15085 1522 aa44.16■■■■■ 4.66
REPIN1-206ENST00000469309 SNAPC4Q5SXM2 1469 aa44.08■■■■■ 4.65
REPIN1-206ENST00000469309 GRIN2BQ13224 1484 aa44.01■■■■■ 4.64
REPIN1-206ENST00000469309 MAGI1Q96QZ7 1491 aaPredicted RBP43.98■■■■■ 4.63
REPIN1-206ENST00000469309 CHMP7Q8WUX9 453 aaPredicted RBP43.95■■■■■ 4.63
REPIN1-206ENST00000469309 GAPVD1Q14C86 1478 aa43.89■■■■■ 4.62
REPIN1-206ENST00000469309 CYB5RLQ6IPT4 315 aa43.86■■■■■ 4.61
REPIN1-206ENST00000469309 PBRM1Q86U86 1689 aa43.86■■■■■ 4.61
REPIN1-206ENST00000469309 ABCA10Q8WWZ4 1543 aa43.86■■■■■ 4.61
REPIN1-206ENST00000469309 SYNJ2O15056 1496 aa43.83■■■■■ 4.61
REPIN1-206ENST00000469309 SYNJ1O43426 1573 aa43.82■■■■■ 4.61
REPIN1-206ENST00000469309 WRNQ14191 1432 aaPredicted RBP eCLIP43.77■■■■■ 4.6
REPIN1-206ENST00000469309 ABCA5Q8WWZ7 1642 aa43.77■■■■■ 4.6
REPIN1-206ENST00000469309 CLASP1Q7Z460 1538 aa43.73■■■■■ 4.59
REPIN1-206ENST00000469309 TOP2BQ02880 1626 aa43.72■■■■■ 4.59
REPIN1-206ENST00000469309 ARAP1Q96P48 1450 aa43.71■■■■■ 4.59
REPIN1-206ENST00000469309 BIVM-ERCC5R4GMW8 1640 aa43.71■■■■■ 4.59
REPIN1-206ENST00000469309 ADAMTS12P58397 1594 aa43.43■■■■■ 4.54
REPIN1-206ENST00000469309 GRIN2AQ12879 1464 aa43.42■■■■■ 4.54
REPIN1-206ENST00000469309 TRHP20396 242 aaPredicted RBP43.35■■■■■ 4.53
REPIN1-206ENST00000469309 FHAD1B1AJZ9 1412 aa43.34■■■■■ 4.53
REPIN1-206ENST00000469309 ERICH3Q5RHP9 1530 aa43.33■■■■■ 4.53
REPIN1-206ENST00000469309 NUP160Q12769 1436 aa43.24■■■■■ 4.51
REPIN1-206ENST00000469309 CEP170Q5SW79 1584 aa43.23■■■■■ 4.51
REPIN1-206ENST00000469309 ERCC6L2Q5T890 1561 aa43.05■■■■■ 4.48
REPIN1-206ENST00000469309 SHROOM2Q13796 1616 aa43.02■■■■■ 4.48
REPIN1-206ENST00000469309 KIF27Q86VH2 1401 aa42.92■■■■■ 4.46
REPIN1-206ENST00000469309 PRG4Q92954 1404 aaPredicted RBP42.84■■■■■ 4.45
REPIN1-206ENST00000469309 JPH4Q96JJ6 628 aa42.84■■■■■ 4.45
REPIN1-206ENST00000469309 RUSC2Q8N2Y8 1516 aa42.81■■■■■ 4.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms