RNA–Protein interactions for RNA: ENST00000479668.5

REPIN1-209, Transcript of replication initiator 1, humanhuman

TSL 2 BASIC

Gene REPIN1, Length 3,182 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REPIN1-209ENST00000479668 NISCHQ9Y2I1 1504 aa30.34■■■□□ 2.45
REPIN1-209ENST00000479668 SHROOM4Q9ULL8 1493 aa27.11■■□□□ 1.93
REPIN1-209ENST00000479668 SUPT5HO00267 1087 aaKnown RBP26.83■■□□□ 1.89
REPIN1-209ENST00000479668 DCAF8L2P0C7V8 631 aa26.21■■□□□ 1.79
REPIN1-209ENST00000479668 CHIC1Q5VXU3 224 aa25.88■■□□□ 1.73
REPIN1-209ENST00000479668 PCGF6Q9BYE7 350 aa25.86■■□□□ 1.73
REPIN1-209ENST00000479668 MYO15BQ96JP2 1530 aa25.82■■□□□ 1.72
REPIN1-209ENST00000479668 HRCP23327 699 aa25.79■■□□□ 1.72
REPIN1-209ENST00000479668 PPARGC1BQ86YN6 1023 aaKnown RBP25.64■■□□□ 1.7
REPIN1-209ENST00000479668 ZCCHC6Q5VYS8 1495 aaKnown RBP25.64■■□□□ 1.69
REPIN1-209ENST00000479668 LOC105371045A0A1W2PR82 267 aa25.5■■□□□ 1.67
REPIN1-209ENST00000479668 CCDC180Q9P1Z9 1646 aa25.12■■□□□ 1.61
REPIN1-209ENST00000479668 EHMT2Q96KQ7 1210 aa25.04■■□□□ 1.6
REPIN1-209ENST00000479668 FAM9AQ8IZU1 332 aaPredicted RBP24.93■■□□□ 1.58
REPIN1-209ENST00000479668 TRIM26Q12899 539 aaPredicted RBP24.89■■□□□ 1.57
REPIN1-209ENST00000479668 DCAF1Q9Y4B6 1507 aa24.83■■□□□ 1.57
REPIN1-209ENST00000479668 TRIM41Q8WV44 630 aa24.69■■□□□ 1.54
REPIN1-209ENST00000479668 RSF1Q96T23 1441 aaPredicted RBP24.36■■□□□ 1.49
REPIN1-209ENST00000479668 ZEB1P37275 1124 aaPredicted RBP24.36■■□□□ 1.49
REPIN1-209ENST00000479668 SCRIBQ14160 1630 aa24.32■■□□□ 1.48
REPIN1-209ENST00000479668 TTBK1Q5TCY1 1321 aaPredicted RBP24.26■■□□□ 1.47
REPIN1-209ENST00000479668 ABCC9O60706 1549 aa24.21■■□□□ 1.47
REPIN1-209ENST00000479668 SCAF1Q9H7N4 1312 aaKnown RBP24.2■■□□□ 1.46
REPIN1-209ENST00000479668 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.18■■□□□ 1.46
REPIN1-209ENST00000479668 RB1CC1Q8TDY2 1594 aa24.16■■□□□ 1.46
REPIN1-209ENST00000479668 CCER1Q8TC90 406 aaPredicted RBP24.06■■□□□ 1.44
REPIN1-209ENST00000479668 CECR2Q9BXF3 1484 aa23.98■■□□□ 1.43
REPIN1-209ENST00000479668 NEUROD1Q13562 356 aa23.8■■□□□ 1.4
REPIN1-209ENST00000479668 MROH2BQ7Z745 1585 aa23.8■■□□□ 1.4
REPIN1-209ENST00000479668 PELP1Q8IZL8 1130 aaKnown RBP23.78■■□□□ 1.4
REPIN1-209ENST00000479668 DIEXFQ68CQ4 756 aaKnown RBP23.72■■□□□ 1.39
REPIN1-209ENST00000479668 ACIN1Q9UKV3 1341 aaKnown RBP23.71■■□□□ 1.39
REPIN1-209ENST00000479668 WIZO95785 1651 aa23.67■■□□□ 1.38
REPIN1-209ENST00000479668 GTF3C3Q9Y5Q9 886 aa23.64■■□□□ 1.38
REPIN1-209ENST00000479668 UBTFP17480 764 aaKnown RBP23.6■■□□□ 1.37
REPIN1-209ENST00000479668 YTHDC1Q96MU7 727 aaKnown RBP23.58■■□□□ 1.36
REPIN1-209ENST00000479668 CENPBP07199 599 aaPredicted RBP23.5■■□□□ 1.35
REPIN1-209ENST00000479668 ABCC8Q09428 1581 aa23.47■■□□□ 1.35
REPIN1-209ENST00000479668 RANGAP1P46060 587 aaPredicted RBP23.46■■□□□ 1.35
REPIN1-209ENST00000479668 CCDC88BA6NC98 1476 aa23.45■■□□□ 1.34
REPIN1-209ENST00000479668 HNRNPUL2Q1KMD3 747 aaKnown RBP23.44■■□□□ 1.34
REPIN1-209ENST00000479668 SOGA1O94964 1423 aa23.42■■□□□ 1.34
REPIN1-209ENST00000479668 CEP162Q5TB80 1403 aa23.39■■□□□ 1.33
REPIN1-209ENST00000479668 NACADO15069 1562 aa23.36■■□□□ 1.33
REPIN1-209ENST00000479668 CSRNP3Q8WYN3 585 aa23.34■■□□□ 1.33
REPIN1-209ENST00000479668 ZNF316A6NFI3 1004 aaPredicted RBP23.32■■□□□ 1.32
REPIN1-209ENST00000479668 RUSC2Q8N2Y8 1516 aa23.3■■□□□ 1.32
REPIN1-209ENST00000479668 BAZ1AQ9NRL2 1556 aaPredicted RBP23.25■■□□□ 1.31
REPIN1-209ENST00000479668 PABPN1Q86U42 306 aaKnown RBP eCLIP23.24■■□□□ 1.31
REPIN1-209ENST00000479668 MIER1Q8N108 512 aa23.22■■□□□ 1.31
REPIN1-209ENST00000479668 TNIKQ9UKE5 1360 aa23.18■■□□□ 1.3
REPIN1-209ENST00000479668 WRNQ14191 1432 aaPredicted RBP eCLIP23.15■■□□□ 1.37e-10■■■■■ 33.4
REPIN1-209ENST00000479668 EIF4G1Q04637 1599 aaKnown RBP23.12■■□□□ 1.29
REPIN1-209ENST00000479668 APLP2Q06481 763 aa23.07■■□□□ 1.28
REPIN1-209ENST00000479668 TOP2AP11388 1531 aaKnown RBP23.06■■□□□ 1.28
REPIN1-209ENST00000479668 SMARCA2P51531 1590 aa23.03■■□□□ 1.28
REPIN1-209ENST00000479668 SMARCA4P51532 1647 aa22.96■■□□□ 1.27
REPIN1-209ENST00000479668 GOLGA3Q08378 1498 aa22.96■■□□□ 1.27
REPIN1-209ENST00000479668 CLIP1P30622 1438 aa22.89■■□□□ 1.25
REPIN1-209ENST00000479668 EEA1Q15075 1411 aa22.87■■□□□ 1.25
REPIN1-209ENST00000479668 ITGAEP38570 1179 aa22.81■■□□□ 1.24
REPIN1-209ENST00000479668 CEP164Q9UPV0 1460 aa22.74■■□□□ 1.23
REPIN1-209ENST00000479668 RAPGEF2Q9Y4G8 1499 aa22.72■■□□□ 1.23
REPIN1-209ENST00000479668 VPS8Q8N3P4 1428 aa22.69■■□□□ 1.22
REPIN1-209ENST00000479668 SYNJ1O43426 1573 aa22.68■■□□□ 1.22
REPIN1-209ENST00000479668 KANK4Q5T7N3 995 aaPredicted RBP22.68■■□□□ 1.22
REPIN1-209ENST00000479668 UNC13AQ9UPW8 1703 aa22.59■■□□□ 1.21
REPIN1-209ENST00000479668 MYT1Q01538 1121 aa22.56■■□□□ 1.2
REPIN1-209ENST00000479668 DHX57Q6P158 1386 aaKnown RBP22.53■■□□□ 1.2
REPIN1-209ENST00000479668 KCNH8Q96L42 1107 aa22.53■■□□□ 1.2
REPIN1-209ENST00000479668 SUPT16HQ9Y5B9 1047 aaKnown RBP22.52■■□□□ 1.2
REPIN1-209ENST00000479668 KIF21BO75037 1637 aa22.52■■□□□ 1.2
REPIN1-209ENST00000479668 BCANQ96GW7 911 aa22.48■■□□□ 1.19
REPIN1-209ENST00000479668 BAZ1BQ9UIG0 1483 aaKnown RBP22.45■■□□□ 1.18
REPIN1-209ENST00000479668 ATAD2BQ9ULI0 1458 aa22.42■■□□□ 1.18
REPIN1-209ENST00000479668 ATP1B4Q9UN42 357 aaPredicted RBP22.41■■□□□ 1.18
REPIN1-209ENST00000479668 BICRAQ9NZM4 1560 aa22.4■■□□□ 1.18
REPIN1-209ENST00000479668 HIRIP3Q9BW71 556 aaPredicted RBP22.38■■□□□ 1.17
REPIN1-209ENST00000479668 DDX10Q13206 875 aaKnown RBP22.33■■□□□ 1.16
REPIN1-209ENST00000479668 ARAP1Q96P48 1450 aa22.31■■□□□ 1.16
REPIN1-209ENST00000479668 P3H3Q8IVL6 736 aa22.31■■□□□ 1.16
REPIN1-209ENST00000479668 SIN3AQ96ST3 1273 aa22.3■■□□□ 1.16
REPIN1-209ENST00000479668 CLSPNQ9HAW4 1339 aa22.3■■□□□ 1.16
REPIN1-209ENST00000479668 FAM50AQ14320 339 aaKnown RBP22.29■■□□□ 1.16
REPIN1-209ENST00000479668 TSHZ2Q9NRE2 1034 aa22.28■■□□□ 1.16
REPIN1-209ENST00000479668 CCNB3Q8WWL7 1395 aa22.25■■□□□ 1.15
REPIN1-209ENST00000479668 FKBP8Q14318 412 aa22.22■■□□□ 1.15
REPIN1-209ENST00000479668 PEG3Q9GZU2 1588 aa22.21■■□□□ 1.15
REPIN1-209ENST00000479668 PRXQ9BXM0 1461 aa22.2■■□□□ 1.14
REPIN1-209ENST00000479668 RAB3GAP2Q9H2M9 1393 aa22.19■■□□□ 1.14
REPIN1-209ENST00000479668 TOP2BQ02880 1626 aa22.17■■□□□ 1.14
REPIN1-209ENST00000479668 TRIM52Q96A61 297 aa22.17■■□□□ 1.14
REPIN1-209ENST00000479668 KIF27Q86VH2 1401 aa22.14■■□□□ 1.13
REPIN1-209ENST00000479668 RRBP1Q9P2E9 1410 aaKnown RBP22.13■■□□□ 1.13
REPIN1-209ENST00000479668 ARHGAP35Q9NRY4 1499 aa22.09■■□□□ 1.13
REPIN1-209ENST00000479668 CUX1P39880 1505 aa22.05■■□□□ 1.12
REPIN1-209ENST00000479668 ERICH3Q5RHP9 1530 aa22.04■■□□□ 1.12
REPIN1-209ENST00000479668 NEFLP07196 543 aa21.99■■□□□ 1.11
REPIN1-209ENST00000479668 SETD5Q9C0A6 1442 aa21.98■■□□□ 1.11
REPIN1-209ENST00000479668 ANP32EQ9BTT0 268 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms