RNA–Protein interactions for RNA: ENST00000466572.5

CCT6A-205, Transcript of chaperonin containing TCP1 subunit 6A, humanhuman

TSL 2

Gene CCT6A, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6A-205ENST00000466572 NISCHQ9Y2I1 1504 aa31.38■■■□□ 2.61
CCT6A-205ENST00000466572 ABCC9O60706 1549 aa28.64■■■□□ 2.17
CCT6A-205ENST00000466572 CCDC180Q9P1Z9 1646 aa28.34■■■□□ 2.13
CCT6A-205ENST00000466572 DNAJC5BQ9UF47 199 aa27.21■■□□□ 1.95
CCT6A-205ENST00000466572 RB1CC1Q8TDY2 1594 aa27.14■■□□□ 1.93
CCT6A-205ENST00000466572 NACADO15069 1562 aa26.88■■□□□ 1.89
CCT6A-205ENST00000466572 PABPN1Q86U42 306 aaKnown RBP eCLIP26.59■■□□□ 1.85
CCT6A-205ENST00000466572 DCAF8L2P0C7V8 631 aa26.56■■□□□ 1.84
CCT6A-205ENST00000466572 UNC13AQ9UPW8 1703 aa26.54■■□□□ 1.84
CCT6A-205ENST00000466572 MYO15BQ96JP2 1530 aa26.42■■□□□ 1.82
CCT6A-205ENST00000466572 BICRAQ9NZM4 1560 aa26.37■■□□□ 1.81
CCT6A-205ENST00000466572 SHROOM4Q9ULL8 1493 aa26.01■■□□□ 1.75
CCT6A-205ENST00000466572 DCAF1Q9Y4B6 1507 aa25.93■■□□□ 1.74
CCT6A-205ENST00000466572 ZCCHC6Q5VYS8 1495 aaKnown RBP25.92■■□□□ 1.74
CCT6A-205ENST00000466572 CC2D2AQ9P2K1 1620 aa25.88■■□□□ 1.73
CCT6A-205ENST00000466572 CECR2Q9BXF3 1484 aa25.85■■□□□ 1.73
CCT6A-205ENST00000466572 EIF4G1Q04637 1599 aaKnown RBP25.74■■□□□ 1.71
CCT6A-205ENST00000466572 SCRIBQ14160 1630 aa25.74■■□□□ 1.71
CCT6A-205ENST00000466572 DNAJC5Q9H3Z4 198 aa25.28■■□□□ 1.64
CCT6A-205ENST00000466572 CUX2O14529 1486 aa24.88■■□□□ 1.57
CCT6A-205ENST00000466572 NCAPD3P42695 1498 aa24.83■■□□□ 1.56
CCT6A-205ENST00000466572 ERCC6Q03468 1493 aa24.75■■□□□ 1.55
CCT6A-205ENST00000466572 ATAD2BQ9ULI0 1458 aa24.67■■□□□ 1.54
CCT6A-205ENST00000466572 HMGXB3Q12766 1538 aa24.6■■□□□ 1.53
CCT6A-205ENST00000466572 SMARCA2P51531 1590 aa24.59■■□□□ 1.53
CCT6A-205ENST00000466572 SMARCA4P51532 1647 aa24.55■■□□□ 1.52
CCT6A-205ENST00000466572 NESP48681 1621 aa24.5■■□□□ 1.51
CCT6A-205ENST00000466572 BAZ1BQ9UIG0 1483 aaKnown RBP24.39■■□□□ 1.5
CCT6A-205ENST00000466572 BAZ1AQ9NRL2 1556 aaPredicted RBP24.38■■□□□ 1.49
CCT6A-205ENST00000466572 THOC2Q8NI27 1593 aaKnown RBP24.35■■□□□ 1.49
CCT6A-205ENST00000466572 PEG3Q9GZU2 1588 aa24.35■■□□□ 1.49
CCT6A-205ENST00000466572 LAMC3Q9Y6N6 1575 aa24.32■■□□□ 1.48
CCT6A-205ENST00000466572 KIF21AQ7Z4S6 1674 aa24.2■■□□□ 1.46
CCT6A-205ENST00000466572 PDS5BQ9NTI5 1447 aa24.18■■□□□ 1.46
CCT6A-205ENST00000466572 MROH2BQ7Z745 1585 aa24.16■■□□□ 1.46
CCT6A-205ENST00000466572 CADPSQ9ULU8 1353 aa24.03■■□□□ 1.44
CCT6A-205ENST00000466572 MRC2Q9UBG0 1479 aa23.98■■□□□ 1.43
CCT6A-205ENST00000466572 TRIM41Q8WV44 630 aa23.95■■□□□ 1.42
CCT6A-205ENST00000466572 WDR62O43379 1518 aa23.94■■□□□ 1.42
CCT6A-205ENST00000466572 WIZO95785 1651 aa23.85■■□□□ 1.41
CCT6A-205ENST00000466572 CEP164Q9UPV0 1460 aa23.81■■□□□ 1.4
CCT6A-205ENST00000466572 FANCD2Q9BXW9 1451 aa23.75■■□□□ 1.39
CCT6A-205ENST00000466572 CFTRP13569 1480 aa23.68■■□□□ 1.38
CCT6A-205ENST00000466572 OSCARQ8IYS5 282 aa23.66■■□□□ 1.38
CCT6A-205ENST00000466572 URB2Q14146 1524 aaKnown RBP23.58■■□□□ 1.36
CCT6A-205ENST00000466572 RSF1Q96T23 1441 aaPredicted RBP23.53■■□□□ 1.36
CCT6A-205ENST00000466572 TOP2AP11388 1531 aaKnown RBP23.53■■□□□ 1.36
CCT6A-205ENST00000466572 PRDM2Q13029 1718 aa23.44■■□□□ 1.34
CCT6A-205ENST00000466572 RIMBP3CA6NJZ7 1639 aa23.4■■□□□ 1.34
CCT6A-205ENST00000466572 RIMBP3BA6NNM3 1639 aa23.4■■□□□ 1.34
CCT6A-205ENST00000466572 RIMBP3Q9UFD9 1639 aa23.4■■□□□ 1.34
CCT6A-205ENST00000466572 IFT140Q96RY7 1462 aa23.36■■□□□ 1.33
CCT6A-205ENST00000466572 ZNF608Q9ULD9 1512 aaPredicted RBP23.33■■□□□ 1.33
CCT6A-205ENST00000466572 ARHGEF11O15085 1522 aa23.28■■□□□ 1.32
CCT6A-205ENST00000466572 CCDC88BA6NC98 1476 aa23.26■■□□□ 1.31
CCT6A-205ENST00000466572 TOPBP1Q92547 1522 aa23.25■■□□□ 1.31
CCT6A-205ENST00000466572 ABCC8Q09428 1581 aa23.22■■□□□ 1.31
CCT6A-205ENST00000466572 EIF4G3O43432 1585 aaKnown RBP23.19■■□□□ 1.3
CCT6A-205ENST00000466572 DNMBPQ6XZF7 1577 aa23.15■■□□□ 1.3
CCT6A-205ENST00000466572 CYB5RLQ6IPT4 315 aa23.11■■□□□ 1.29
CCT6A-205ENST00000466572 TARBP1Q13395 1621 aaKnown RBP23.1■■□□□ 1.29
CCT6A-205ENST00000466572 CHD1O14646 1710 aa23.1■■□□□ 1.29
CCT6A-205ENST00000466572 AEBP2Q6ZN18 517 aaPredicted RBP23.09■■□□□ 1.29
CCT6A-205ENST00000466572 AQRO60306 1485 aaKnown RBP eCLIP23.07■■□□□ 1.287e-6■■□□□ 13.1
CCT6A-205ENST00000466572 ARAP1Q96P48 1450 aa23.03■■□□□ 1.28
CCT6A-205ENST00000466572 POLA1P09884 1462 aaPredicted RBP22.99■■□□□ 1.27
CCT6A-205ENST00000466572 FBLN2P98095 1184 aa22.96■■□□□ 1.27
CCT6A-205ENST00000466572 TRHP20396 242 aaPredicted RBP22.95■■□□□ 1.26
CCT6A-205ENST00000466572 RAD54L2Q9Y4B4 1467 aa22.9■■□□□ 1.26
CCT6A-205ENST00000466572 SOGA1O94964 1423 aa22.88■■□□□ 1.25
CCT6A-205ENST00000466572 TDRD9Q8NDG6 1382 aaKnown RBP22.87■■□□□ 1.25
CCT6A-205ENST00000466572 WDR97A6NE52 1622 aa22.86■■□□□ 1.25
CCT6A-205ENST00000466572 CLASP1Q7Z460 1538 aa22.84■■□□□ 1.25
CCT6A-205ENST00000466572 SNAPC4Q5SXM2 1469 aa22.83■■□□□ 1.25
CCT6A-205ENST00000466572 FGD5Q6ZNL6 1462 aa22.79■■□□□ 1.24
CCT6A-205ENST00000466572 SYNJ1O43426 1573 aa22.78■■□□□ 1.24
CCT6A-205ENST00000466572 MAGI1Q96QZ7 1491 aaPredicted RBP22.78■■□□□ 1.24
CCT6A-205ENST00000466572 CHMP7Q8WUX9 453 aaPredicted RBP22.76■■□□□ 1.23
CCT6A-205ENST00000466572 GRIN2BQ13224 1484 aa22.73■■□□□ 1.23
CCT6A-205ENST00000466572 CUX1P39880 1505 aa22.72■■□□□ 1.23
CCT6A-205ENST00000466572 SYNJ2O15056 1496 aa22.7■■□□□ 1.22
CCT6A-205ENST00000466572 PBRM1Q86U86 1689 aa22.62■■□□□ 1.21
CCT6A-205ENST00000466572 GAPVD1Q14C86 1478 aa22.6■■□□□ 1.21
CCT6A-205ENST00000466572 ABCA10Q8WWZ4 1543 aa22.53■■□□□ 1.2
CCT6A-205ENST00000466572 ABCA5Q8WWZ7 1642 aa22.53■■□□□ 1.2
CCT6A-205ENST00000466572 GRIN2AQ12879 1464 aa22.44■■□□□ 1.18
CCT6A-205ENST00000466572 ERCC6L2Q5T890 1561 aa22.42■■□□□ 1.18
CCT6A-205ENST00000466572 NUP160Q12769 1436 aa22.4■■□□□ 1.18
CCT6A-205ENST00000466572 CEP170Q5SW79 1584 aa22.38■■□□□ 1.17
CCT6A-205ENST00000466572 ADAMTS12P58397 1594 aa22.38■■□□□ 1.17
CCT6A-205ENST00000466572 WRNQ14191 1432 aaPredicted RBP eCLIP22.35■■□□□ 1.17
CCT6A-205ENST00000466572 SHROOM2Q13796 1616 aa22.35■■□□□ 1.17
CCT6A-205ENST00000466572 FHAD1B1AJZ9 1412 aa22.31■■□□□ 1.16
CCT6A-205ENST00000466572 BIVM-ERCC5R4GMW8 1640 aa22.28■■□□□ 1.16
CCT6A-205ENST00000466572 TOP2BQ02880 1626 aa22.27■■□□□ 1.16
CCT6A-205ENST00000466572 KIF13AQ9H1H9 1805 aa22.25■■□□□ 1.15
CCT6A-205ENST00000466572 ERICH3Q5RHP9 1530 aa22.25■■□□□ 1.15
CCT6A-205ENST00000466572 PRG4Q92954 1404 aaPredicted RBP22.18■■□□□ 1.14
CCT6A-205ENST00000466572 SUPT5HO00267 1087 aaKnown RBP22.14■■□□□ 1.13
CCT6A-205ENST00000466572 JPH4Q96JJ6 628 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms