RNA–Protein interactions for RNA: ENST00000430340.5

LPP-206, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 3

Gene LPP, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-206ENST00000430340 NISCHQ9Y2I1 1504 aa24.56■■□□□ 1.52
LPP-206ENST00000430340 CCDC180Q9P1Z9 1646 aa21.38■■□□□ 1.01
LPP-206ENST00000430340 ZCCHC6Q5VYS8 1495 aaKnown RBP20.66■□□□□ 0.9
LPP-206ENST00000430340 DCAF1Q9Y4B6 1507 aa20.34■□□□□ 0.85
LPP-206ENST00000430340 DCAF8L2P0C7V8 631 aa20.28■□□□□ 0.84
LPP-206ENST00000430340 SHROOM4Q9ULL8 1493 aa20.16■□□□□ 0.82
LPP-206ENST00000430340 MYO15BQ96JP2 1530 aa20.03■□□□□ 0.8
LPP-206ENST00000430340 ABCC9O60706 1549 aa20.02■□□□□ 0.79
LPP-206ENST00000430340 NACADO15069 1562 aa19.87■□□□□ 0.77
LPP-206ENST00000430340 RB1CC1Q8TDY2 1594 aa19.68■□□□□ 0.74
LPP-206ENST00000430340 SCRIBQ14160 1630 aa19.65■□□□□ 0.74
LPP-206ENST00000430340 SUPT5HO00267 1087 aaKnown RBP19.52■□□□□ 0.72
LPP-206ENST00000430340 UNC13AQ9UPW8 1703 aa19.2■□□□□ 0.66
LPP-206ENST00000430340 RSF1Q96T23 1441 aaPredicted RBP19.11■□□□□ 0.65
LPP-206ENST00000430340 CECR2Q9BXF3 1484 aa19.03■□□□□ 0.64
LPP-206ENST00000430340 BAZ1AQ9NRL2 1556 aaPredicted RBP18.99■□□□□ 0.63
LPP-206ENST00000430340 BICRAQ9NZM4 1560 aa18.98■□□□□ 0.63
LPP-206ENST00000430340 MROH2BQ7Z745 1585 aa18.96■□□□□ 0.63
LPP-206ENST00000430340 PABPN1Q86U42 306 aaKnown RBP eCLIP18.9■□□□□ 0.62
LPP-206ENST00000430340 SMARCA4P51532 1647 aa18.85■□□□□ 0.61
LPP-206ENST00000430340 WIZO95785 1651 aa18.82■□□□□ 0.6
LPP-206ENST00000430340 CHIC1Q5VXU3 224 aa18.76■□□□□ 0.59
LPP-206ENST00000430340 TOP2AP11388 1531 aaKnown RBP18.68■□□□□ 0.58
LPP-206ENST00000430340 PEG3Q9GZU2 1588 aa18.6■□□□□ 0.57
LPP-206ENST00000430340 SMARCA2P51531 1590 aa18.54■□□□□ 0.56
LPP-206ENST00000430340 ATAD2BQ9ULI0 1458 aa18.49■□□□□ 0.55
LPP-206ENST00000430340 CCDC88BA6NC98 1476 aa18.46■□□□□ 0.54
LPP-206ENST00000430340 EIF4G1Q04637 1599 aaKnown RBP18.44■□□□□ 0.54
LPP-206ENST00000430340 BAZ1BQ9UIG0 1483 aaKnown RBP18.44■□□□□ 0.54
LPP-206ENST00000430340 TRIM41Q8WV44 630 aa18.38■□□□□ 0.53
LPP-206ENST00000430340 HMGXB3Q12766 1538 aa18.32■□□□□ 0.52
LPP-206ENST00000430340 NCAPD3P42695 1498 aa18.31■□□□□ 0.52
LPP-206ENST00000430340 CC2D2AQ9P2K1 1620 aa18.12■□□□□ 0.49
LPP-206ENST00000430340 ABCC8Q09428 1581 aa18.11■□□□□ 0.49
LPP-206ENST00000430340 WRNQ14191 1432 aaPredicted RBP eCLIP18.03■□□□□ 0.48
LPP-206ENST00000430340 LOC105371045A0A1W2PR82 267 aa18.01■□□□□ 0.47
LPP-206ENST00000430340 FAM9AQ8IZU1 332 aaPredicted RBP18.01■□□□□ 0.47
LPP-206ENST00000430340 CFTRP13569 1480 aa17.95■□□□□ 0.46
LPP-206ENST00000430340 EEA1Q15075 1411 aa17.92■□□□□ 0.46
LPP-206ENST00000430340 PRDM2Q13029 1718 aa17.9■□□□□ 0.46
LPP-206ENST00000430340 SYNJ1O43426 1573 aa17.9■□□□□ 0.46
LPP-206ENST00000430340 CADPSQ9ULU8 1353 aa17.87■□□□□ 0.45
LPP-206ENST00000430340 TOP2BQ02880 1626 aa17.85■□□□□ 0.45
LPP-206ENST00000430340 BIVM-ERCC5R4GMW8 1640 aa17.83■□□□□ 0.44
LPP-206ENST00000430340 SOGA1O94964 1423 aa17.81■□□□□ 0.44
LPP-206ENST00000430340 CSRNP3Q8WYN3 585 aa17.77■□□□□ 0.44
LPP-206ENST00000430340 CUX1P39880 1505 aa17.72■□□□□ 0.43
LPP-206ENST00000430340 EHMT2Q96KQ7 1210 aa17.72■□□□□ 0.43
LPP-206ENST00000430340 RUSC2Q8N2Y8 1516 aa17.7■□□□□ 0.42
LPP-206ENST00000430340 LAMC3Q9Y6N6 1575 aa17.69■□□□□ 0.42
LPP-206ENST00000430340 FANCD2Q9BXW9 1451 aa17.68■□□□□ 0.42
LPP-206ENST00000430340 GOLGA3Q08378 1498 aa17.66■□□□□ 0.42
LPP-206ENST00000430340 CEP164Q9UPV0 1460 aa17.64■□□□□ 0.41
LPP-206ENST00000430340 KIF21BO75037 1637 aa17.63■□□□□ 0.41
LPP-206ENST00000430340 TNIKQ9UKE5 1360 aa17.62■□□□□ 0.41
LPP-206ENST00000430340 NESP48681 1621 aa17.59■□□□□ 0.41
LPP-206ENST00000430340 UBTFP17480 764 aaKnown RBP17.59■□□□□ 0.41
LPP-206ENST00000430340 KIF27Q86VH2 1401 aa17.58■□□□□ 0.41
LPP-206ENST00000430340 PDS5BQ9NTI5 1447 aa17.57■□□□□ 0.4
LPP-206ENST00000430340 DNMBPQ6XZF7 1577 aa17.57■□□□□ 0.4
LPP-206ENST00000430340 FGD5Q6ZNL6 1462 aa17.53■□□□□ 0.4
LPP-206ENST00000430340 CEP162Q5TB80 1403 aa17.52■□□□□ 0.4
LPP-206ENST00000430340 ERICH3Q5RHP9 1530 aa17.49■□□□□ 0.39
LPP-206ENST00000430340 TOPBP1Q92547 1522 aa17.49■□□□□ 0.39
LPP-206ENST00000430340 DNAJC5BQ9UF47 199 aa17.48■□□□□ 0.39
LPP-206ENST00000430340 CUX2O14529 1486 aa17.47■□□□□ 0.39
LPP-206ENST00000430340 PRXQ9BXM0 1461 aa17.45■□□□□ 0.38
LPP-206ENST00000430340 RAPGEF2Q9Y4G8 1499 aa17.44■□□□□ 0.38
LPP-206ENST00000430340 TRIM26Q12899 539 aaPredicted RBP17.44■□□□□ 0.38
LPP-206ENST00000430340 PCGF6Q9BYE7 350 aa17.43■□□□□ 0.38
LPP-206ENST00000430340 KIF21AQ7Z4S6 1674 aa17.42■□□□□ 0.38
LPP-206ENST00000430340 URB2Q14146 1524 aaKnown RBP17.41■□□□□ 0.38
LPP-206ENST00000430340 POLA1P09884 1462 aaPredicted RBP17.4■□□□□ 0.38
LPP-206ENST00000430340 ABCA10Q8WWZ4 1543 aa17.38■□□□□ 0.37
LPP-206ENST00000430340 CLIP1P30622 1438 aa17.37■□□□□ 0.37
LPP-206ENST00000430340 IGF1RP08069 1367 aa17.35■□□□□ 0.37
LPP-206ENST00000430340 RAD54L2Q9Y4B4 1467 aa17.34■□□□□ 0.37
LPP-206ENST00000430340 MRC2Q9UBG0 1479 aa17.31■□□□□ 0.36
LPP-206ENST00000430340 CARMIL1Q5VZK9 1371 aa17.3■□□□□ 0.36
LPP-206ENST00000430340 WDR97A6NE52 1622 aa17.29■□□□□ 0.36
LPP-206ENST00000430340 CUL7Q14999 1698 aa17.26■□□□□ 0.35
LPP-206ENST00000430340 VPS8Q8N3P4 1428 aa17.23■□□□□ 0.35
LPP-206ENST00000430340 ABCA5Q8WWZ7 1642 aa17.21■□□□□ 0.35
LPP-206ENST00000430340 ERCC6Q03468 1493 aa17.21■□□□□ 0.35
LPP-206ENST00000430340 GAPVD1Q14C86 1478 aa17.2■□□□□ 0.34
LPP-206ENST00000430340 RANGAP1P46060 587 aaPredicted RBP17.2■□□□□ 0.34
LPP-206ENST00000430340 TARBP1Q13395 1621 aaKnown RBP17.2■□□□□ 0.34
LPP-206ENST00000430340 WDR62O43379 1518 aa17.19■□□□□ 0.34
LPP-206ENST00000430340 APLP2Q06481 763 aa17.18■□□□□ 0.34
LPP-206ENST00000430340 TDRD9Q8NDG6 1382 aaKnown RBP17.17■□□□□ 0.34
LPP-206ENST00000430340 PPARGC1BQ86YN6 1023 aaKnown RBP17.17■□□□□ 0.34
LPP-206ENST00000430340 IFT140Q96RY7 1462 aa17.15■□□□□ 0.34
LPP-206ENST00000430340 ARAP1Q96P48 1450 aa17.12■□□□□ 0.33
LPP-206ENST00000430340 HRCP23327 699 aa17.09■□□□□ 0.33
LPP-206ENST00000430340 ARHGAP35Q9NRY4 1499 aa17.09■□□□□ 0.33
LPP-206ENST00000430340 PBRM1Q86U86 1689 aa17.09■□□□□ 0.33
LPP-206ENST00000430340 CTTNBP2Q8WZ74 1663 aa17.08■□□□□ 0.32
LPP-206ENST00000430340 THOC2Q8NI27 1593 aaKnown RBP17.07■□□□□ 0.32
LPP-206ENST00000430340 GRIN2BQ13224 1484 aa17.05■□□□□ 0.32
LPP-206ENST00000430340 EFCAB5A4FU69 1503 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms