RNA–Protein interactions for RNA: ENST00000585595.5

MBD1-211, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MBD1, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-211ENST00000585595 NISCHQ9Y2I1 1504 aa33.51■■■□□ 2.96
MBD1-211ENST00000585595 CCDC180Q9P1Z9 1646 aa28.93■■■□□ 2.22
MBD1-211ENST00000585595 ZCCHC6Q5VYS8 1495 aaKnown RBP28.23■■■□□ 2.11
MBD1-211ENST00000585595 SHROOM4Q9ULL8 1493 aa27.86■■■□□ 2.05
MBD1-211ENST00000585595 DCAF8L2P0C7V8 631 aa27.71■■■□□ 2.03
MBD1-211ENST00000585595 DCAF1Q9Y4B6 1507 aa27.62■■■□□ 2.01
MBD1-211ENST00000585595 MYO15BQ96JP2 1530 aa27.08■■□□□ 1.93
MBD1-211ENST00000585595 ABCC9O60706 1549 aa27.06■■□□□ 1.92
MBD1-211ENST00000585595 SUPT5HO00267 1087 aaKnown RBP27.05■■□□□ 1.92
MBD1-211ENST00000585595 NACADO15069 1562 aa26.84■■□□□ 1.89
MBD1-211ENST00000585595 SCRIBQ14160 1630 aa26.81■■□□□ 1.88
MBD1-211ENST00000585595 RB1CC1Q8TDY2 1594 aa26.51■■□□□ 1.83
MBD1-211ENST00000585595 RSF1Q96T23 1441 aaPredicted RBP26.22■■□□□ 1.79
MBD1-211ENST00000585595 CHIC1Q5VXU3 224 aa26.1■■□□□ 1.77
MBD1-211ENST00000585595 UNC13AQ9UPW8 1703 aa26.09■■□□□ 1.77
MBD1-211ENST00000585595 CECR2Q9BXF3 1484 aa26.08■■□□□ 1.76
MBD1-211ENST00000585595 MROH2BQ7Z745 1585 aa25.96■■□□□ 1.75
MBD1-211ENST00000585595 BAZ1AQ9NRL2 1556 aaPredicted RBP25.82■■□□□ 1.72
MBD1-211ENST00000585595 WIZO95785 1651 aa25.8■■□□□ 1.72
MBD1-211ENST00000585595 BICRAQ9NZM4 1560 aa25.75■■□□□ 1.71
MBD1-211ENST00000585595 PABPN1Q86U42 306 aaKnown RBP eCLIP25.68■■□□□ 1.7
MBD1-211ENST00000585595 SMARCA4P51532 1647 aa25.67■■□□□ 1.7
MBD1-211ENST00000585595 TOP2AP11388 1531 aaKnown RBP25.46■■□□□ 1.67
MBD1-211ENST00000585595 TRIM41Q8WV44 630 aa25.34■■□□□ 1.65
MBD1-211ENST00000585595 SMARCA2P51531 1590 aa25.27■■□□□ 1.64
MBD1-211ENST00000585595 PEG3Q9GZU2 1588 aa25.27■■□□□ 1.64
MBD1-211ENST00000585595 CCDC88BA6NC98 1476 aa25.27■■□□□ 1.64
MBD1-211ENST00000585595 EIF4G1Q04637 1599 aaKnown RBP25.24■■□□□ 1.63
MBD1-211ENST00000585595 LOC105371045A0A1W2PR82 267 aa25.2■■□□□ 1.62
MBD1-211ENST00000585595 ATAD2BQ9ULI0 1458 aa25.12■■□□□ 1.61
MBD1-211ENST00000585595 BAZ1BQ9UIG0 1483 aaKnown RBP25.02■■□□□ 1.6
MBD1-211ENST00000585595 FAM9AQ8IZU1 332 aaPredicted RBP24.98■■□□□ 1.59
MBD1-211ENST00000585595 ABCC8Q09428 1581 aa24.95■■□□□ 1.58
MBD1-211ENST00000585595 NCAPD3P42695 1498 aa24.79■■□□□ 1.56
MBD1-211ENST00000585595 HMGXB3Q12766 1538 aa24.77■■□□□ 1.56
MBD1-211ENST00000585595 EHMT2Q96KQ7 1210 aa24.68■■□□□ 1.54
MBD1-211ENST00000585595 WRNQ14191 1432 aaPredicted RBP eCLIP24.66■■□□□ 1.54
MBD1-211ENST00000585595 SOGA1O94964 1423 aa24.57■■□□□ 1.52
MBD1-211ENST00000585595 SYNJ1O43426 1573 aa24.56■■□□□ 1.52
MBD1-211ENST00000585595 PCGF6Q9BYE7 350 aa24.56■■□□□ 1.52
MBD1-211ENST00000585595 EEA1Q15075 1411 aa24.5■■□□□ 1.51
MBD1-211ENST00000585595 RUSC2Q8N2Y8 1516 aa24.48■■□□□ 1.51
MBD1-211ENST00000585595 CC2D2AQ9P2K1 1620 aa24.46■■□□□ 1.51
MBD1-211ENST00000585595 CSRNP3Q8WYN3 585 aa24.42■■□□□ 1.5
MBD1-211ENST00000585595 CFTRP13569 1480 aa24.39■■□□□ 1.5
MBD1-211ENST00000585595 TOP2BQ02880 1626 aa24.38■■□□□ 1.49
MBD1-211ENST00000585595 TRIM26Q12899 539 aaPredicted RBP24.36■■□□□ 1.49
MBD1-211ENST00000585595 BIVM-ERCC5R4GMW8 1640 aa24.34■■□□□ 1.49
MBD1-211ENST00000585595 PRDM2Q13029 1718 aa24.3■■□□□ 1.48
MBD1-211ENST00000585595 TNIKQ9UKE5 1360 aa24.27■■□□□ 1.47
MBD1-211ENST00000585595 GOLGA3Q08378 1498 aa24.24■■□□□ 1.47
MBD1-211ENST00000585595 CUX1P39880 1505 aa24.23■■□□□ 1.47
MBD1-211ENST00000585595 CADPSQ9ULU8 1353 aa24.22■■□□□ 1.47
MBD1-211ENST00000585595 UBTFP17480 764 aaKnown RBP24.2■■□□□ 1.47
MBD1-211ENST00000585595 CEP162Q5TB80 1403 aa24.2■■□□□ 1.46
MBD1-211ENST00000585595 HRCP23327 699 aa24.2■■□□□ 1.46
MBD1-211ENST00000585595 KIF21BO75037 1637 aa24.19■■□□□ 1.46
MBD1-211ENST00000585595 CEP164Q9UPV0 1460 aa24.18■■□□□ 1.46
MBD1-211ENST00000585595 DNAJC5BQ9UF47 199 aa24.1■■□□□ 1.45
MBD1-211ENST00000585595 RAPGEF2Q9Y4G8 1499 aa24.03■■□□□ 1.44
MBD1-211ENST00000585595 PPARGC1BQ86YN6 1023 aaKnown RBP24.03■■□□□ 1.44
MBD1-211ENST00000585595 KIF27Q86VH2 1401 aa23.98■■□□□ 1.43
MBD1-211ENST00000585595 FANCD2Q9BXW9 1451 aa23.97■■□□□ 1.43
MBD1-211ENST00000585595 PRXQ9BXM0 1461 aa23.94■■□□□ 1.42
MBD1-211ENST00000585595 NESP48681 1621 aa23.93■■□□□ 1.42
MBD1-211ENST00000585595 ERICH3Q5RHP9 1530 aa23.92■■□□□ 1.42
MBD1-211ENST00000585595 CLIP1P30622 1438 aa23.9■■□□□ 1.42
MBD1-211ENST00000585595 FGD5Q6ZNL6 1462 aa23.89■■□□□ 1.41
MBD1-211ENST00000585595 LAMC3Q9Y6N6 1575 aa23.86■■□□□ 1.41
MBD1-211ENST00000585595 CUX2O14529 1486 aa23.84■■□□□ 1.41
MBD1-211ENST00000585595 DNMBPQ6XZF7 1577 aa23.82■■□□□ 1.4
MBD1-211ENST00000585595 TOPBP1Q92547 1522 aa23.77■■□□□ 1.39
MBD1-211ENST00000585595 RANGAP1P46060 587 aaPredicted RBP23.75■■□□□ 1.39
MBD1-211ENST00000585595 IGF1RP08069 1367 aa23.74■■□□□ 1.39
MBD1-211ENST00000585595 TTBK1Q5TCY1 1321 aaPredicted RBP23.74■■□□□ 1.39
MBD1-211ENST00000585595 VPS8Q8N3P4 1428 aa23.73■■□□□ 1.39
MBD1-211ENST00000585595 POLA1P09884 1462 aaPredicted RBP23.69■■□□□ 1.38
MBD1-211ENST00000585595 PDS5BQ9NTI5 1447 aa23.68■■□□□ 1.38
MBD1-211ENST00000585595 RAD54L2Q9Y4B4 1467 aa23.67■■□□□ 1.38
MBD1-211ENST00000585595 URB2Q14146 1524 aaKnown RBP23.65■■□□□ 1.38
MBD1-211ENST00000585595 ABCA10Q8WWZ4 1543 aa23.65■■□□□ 1.38
MBD1-211ENST00000585595 CARMIL1Q5VZK9 1371 aa23.63■■□□□ 1.37
MBD1-211ENST00000585595 KIF21AQ7Z4S6 1674 aa23.62■■□□□ 1.37
MBD1-211ENST00000585595 ZEB1P37275 1124 aaPredicted RBP23.6■■□□□ 1.37
MBD1-211ENST00000585595 ARAP1Q96P48 1450 aa23.6■■□□□ 1.37
MBD1-211ENST00000585595 APLP2Q06481 763 aa23.57■■□□□ 1.36
MBD1-211ENST00000585595 WDR97A6NE52 1622 aa23.54■■□□□ 1.36
MBD1-211ENST00000585595 ARHGAP35Q9NRY4 1499 aa23.51■■□□□ 1.35
MBD1-211ENST00000585595 CUL7Q14999 1698 aa23.46■■□□□ 1.35
MBD1-211ENST00000585595 ABCA5Q8WWZ7 1642 aa23.42■■□□□ 1.34
MBD1-211ENST00000585595 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.41■■□□□ 1.34
MBD1-211ENST00000585595 TDRD9Q8NDG6 1382 aaKnown RBP23.4■■□□□ 1.34
MBD1-211ENST00000585595 GAPVD1Q14C86 1478 aa23.37■■□□□ 1.33
MBD1-211ENST00000585595 TARBP1Q13395 1621 aaKnown RBP23.36■■□□□ 1.33
MBD1-211ENST00000585595 CCER1Q8TC90 406 aaPredicted RBP23.35■■□□□ 1.33
MBD1-211ENST00000585595 MRC2Q9UBG0 1479 aa23.35■■□□□ 1.33
MBD1-211ENST00000585595 CTTNBP2Q8WZ74 1663 aa23.32■■□□□ 1.32
MBD1-211ENST00000585595 KANK4Q5T7N3 995 aaPredicted RBP23.31■■□□□ 1.32
MBD1-211ENST00000585595 HNRNPUL2Q1KMD3 747 aaKnown RBP23.24■■□□□ 1.31
MBD1-211ENST00000585595 EFCAB5A4FU69 1503 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms