RNA–Protein interactions for RNA: ENST00000469336.1

UBE3C-204, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-204ENST00000469336 AEBP2Q6ZN18 517 aaPredicted RBP30.93■■■□□ 2.54
UBE3C-204ENST00000469336 CHIC1Q5VXU3 224 aa29.59■■■□□ 2.33
UBE3C-204ENST00000469336 SENP3Q9H4L4 574 aaPredicted RBP26.17■■□□□ 1.78
UBE3C-204ENST00000469336 PHF23Q9BUL5 403 aaPredicted RBP26.05■■□□□ 1.76
UBE3C-204ENST00000469336 FOXD1Q16676 465 aa24.47■■□□□ 1.51
UBE3C-204ENST00000469336 PLPPR3Q6T4P5 718 aa23.74■■□□□ 1.39
UBE3C-204ENST00000469336 PPP6R1Q9UPN7 881 aa23.2■■□□□ 1.3
UBE3C-204ENST00000469336 ADRA2BP18089 450 aa23.13■■□□□ 1.29
UBE3C-204ENST00000469336 PIAS4Q8N2W9 510 aaPredicted RBP22.92■■□□□ 1.26
UBE3C-204ENST00000469336 MSH5O43196 834 aa22.64■■□□□ 1.21
UBE3C-204ENST00000469336 POTEDQ86YR6 584 aa21.67■■□□□ 1.06
UBE3C-204ENST00000469336 MAPK8IP2Q13387 824 aaPredicted RBP21.18■□□□□ 0.98
UBE3C-204ENST00000469336 SCAF1Q9H7N4 1312 aaKnown RBP20.97■□□□□ 0.95
UBE3C-204ENST00000469336 PPP4R3CPQ6ZMV5 832 aa20.93■□□□□ 0.94
UBE3C-204ENST00000469336 DMRT2Q9Y5R5 561 aa20.84■□□□□ 0.93
UBE3C-204ENST00000469336 CNKSR2Q8WXI2 1034 aa20.39■□□□□ 0.85
UBE3C-204ENST00000469336 HOXD11P31277 338 aaPredicted RBP20.19■□□□□ 0.82
UBE3C-204ENST00000469336 RNF216Q9NWF9 866 aaPredicted RBP20.11■□□□□ 0.81
UBE3C-204ENST00000469336 NCBP3Q53F19 620 aaKnown RBP20.1■□□□□ 0.81
UBE3C-204ENST00000469336 DCAF8L1A6NGE4 600 aa20.06■□□□□ 0.8
UBE3C-204ENST00000469336 NPM3O75607 178 aaKnown RBP19.94■□□□□ 0.78
UBE3C-204ENST00000469336 KCNA4P22459 653 aa19.9■□□□□ 0.78
UBE3C-204ENST00000469336 RNF39Q9H2S5 420 aa19.41■□□□□ 0.7
UBE3C-204ENST00000469336 CACNB1Q02641 598 aaPredicted RBP19.31■□□□□ 0.68
UBE3C-204ENST00000469336 DNAJC5BQ9UF47 199 aa19.28■□□□□ 0.68
UBE3C-204ENST00000469336 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.27■□□□□ 0.684e-7■□□□□ 9.3
UBE3C-204ENST00000469336 C1QBPQ07021 282 aaKnown RBP19.08■□□□□ 0.64
UBE3C-204ENST00000469336 SLC4A2P04920 1241 aa18.99■□□□□ 0.63
UBE3C-204ENST00000469336 U3KPZ7 1027 aaPredicted RBP18.94■□□□□ 0.62
UBE3C-204ENST00000469336 SLC4A1APQ9BWU0 796 aaKnown RBP18.78■□□□□ 0.6
UBE3C-204ENST00000469336 SPINK5Q9NQ38 1064 aaPredicted RBP18.62■□□□□ 0.57
UBE3C-204ENST00000469336 CAPN15O75808 1086 aa18.51■□□□□ 0.55
UBE3C-204ENST00000469336 FOXD4L1Q9NU39 408 aa18.37■□□□□ 0.53
UBE3C-204ENST00000469336 MYCNP04198 464 aaPredicted RBP18.36■□□□□ 0.53
UBE3C-204ENST00000469336 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.34■□□□□ 0.53
UBE3C-204ENST00000469336 HNRNPUL2Q1KMD3 747 aaKnown RBP18.34■□□□□ 0.53
UBE3C-204ENST00000469336 ZBTB22O15209 634 aa18.33■□□□□ 0.52
UBE3C-204ENST00000469336 TRHP20396 242 aaPredicted RBP18.33■□□□□ 0.52
UBE3C-204ENST00000469336 DSG3P32926 999 aa18.32■□□□□ 0.52
UBE3C-204ENST00000469336 SAMD1Q6SPF0 538 aaPredicted RBP18.3■□□□□ 0.52
UBE3C-204ENST00000469336 APLP2Q06481 763 aa18.24■□□□□ 0.51
UBE3C-204ENST00000469336 ABCB7O75027 752 aa18.19■□□□□ 0.5
UBE3C-204ENST00000469336 ZNF219Q9P2Y4 722 aaPredicted RBP18.17■□□□□ 0.5
UBE3C-204ENST00000469336 ATF5Q9Y2D1 282 aaPredicted RBP18.07■□□□□ 0.48
UBE3C-204ENST00000469336 POLA2Q14181 598 aa17.89■□□□□ 0.45
UBE3C-204ENST00000469336 CSRNP3Q8WYN3 585 aa17.75■□□□□ 0.43
UBE3C-204ENST00000469336 EHMT2Q96KQ7 1210 aa17.74■□□□□ 0.43
UBE3C-204ENST00000469336 ATXN8OSP0DMR3 200 aa17.68■□□□□ 0.42
UBE3C-204ENST00000469336 ZBTB12Q9Y330 459 aaPredicted RBP17.39■□□□□ 0.37
UBE3C-204ENST00000469336 RBM42Q9BTD8 480 aaKnown RBP17.35■□□□□ 0.37
UBE3C-204ENST00000469336 OSCARQ8IYS5 282 aa17.32■□□□□ 0.36
UBE3C-204ENST00000469336 MKRN4PQ13434 485 aaPredicted RBP17.21■□□□□ 0.35
UBE3C-204ENST00000469336 FBLN2P98095 1184 aa17.17■□□□□ 0.34
UBE3C-204ENST00000469336 AKT1S1Q96B36 256 aa17.06■□□□□ 0.32
UBE3C-204ENST00000469336 POTEHQ6S545 545 aa17.02■□□□□ 0.32
UBE3C-204ENST00000469336 REM2Q8IYK8 340 aaPredicted RBP16.97■□□□□ 0.31
UBE3C-204ENST00000469336 SPDYE2BA6NHP3 402 aa16.94■□□□□ 0.3
UBE3C-204ENST00000469336 SPDYE6P0CI01 402 aa16.94■□□□□ 0.3
UBE3C-204ENST00000469336 SPDYE2Q495Y8 402 aa16.94■□□□□ 0.3
UBE3C-204ENST00000469336 CHRDL2Q6WN34 429 aa16.93■□□□□ 0.3
UBE3C-204ENST00000469336 ZNF692Q9BU19 519 aaPredicted RBP16.85■□□□□ 0.29
UBE3C-204ENST00000469336 PITPNM1O00562 1244 aa16.8■□□□□ 0.28
UBE3C-204ENST00000469336 SSUH2Q9Y2M2 353 aa16.79■□□□□ 0.28
UBE3C-204ENST00000469336 PABPN1Q86U42 306 aaKnown RBP eCLIP16.65■□□□□ 0.26
UBE3C-204ENST00000469336 CLEC11AQ9Y240 323 aa16.64■□□□□ 0.25
UBE3C-204ENST00000469336 PIP4P2Q8N4L2 257 aa16.63■□□□□ 0.25
UBE3C-204ENST00000469336 SPDYE1Q8NFV5 336 aaPredicted RBP16.57■□□□□ 0.24
UBE3C-204ENST00000469336 FXR2P51116 673 aaKnown RBP eCLIP16.55■□□□□ 0.24
UBE3C-204ENST00000469336 SPDYE4A6NLX3 237 aa16.51■□□□□ 0.23
UBE3C-204ENST00000469336 PRKAR2AP13861 404 aaKnown RBP16.37■□□□□ 0.21
UBE3C-204ENST00000469336 PRR29P0C7W0 189 aa16.35■□□□□ 0.21
UBE3C-204ENST00000469336 CHADLQ6NUI6 762 aa16.34■□□□□ 0.21
UBE3C-204ENST00000469336 HAX1O00165 279 aa16.24■□□□□ 0.19
UBE3C-204ENST00000469336 EVX2Q03828 476 aa16.17■□□□□ 0.18
UBE3C-204ENST00000469336 STAG3Q9UJ98 1225 aa16.12■□□□□ 0.17
UBE3C-204ENST00000469336 PROM2Q8N271 834 aa16.11■□□□□ 0.17
UBE3C-204ENST00000469336 SP7Q8TDD2 431 aaPredicted RBP16.09■□□□□ 0.17
UBE3C-204ENST00000469336 FKBP8Q14318 412 aa16.08■□□□□ 0.16
UBE3C-204ENST00000469336 CREBZFQ9NS37 354 aa16.05■□□□□ 0.16
UBE3C-204ENST00000469336 FARP1Q9Y4F1 1045 aaPredicted RBP16.03■□□□□ 0.16
UBE3C-204ENST00000469336 C19orf67A6NJJ6 358 aa16.01■□□□□ 0.15
UBE3C-204ENST00000469336 CD44P16070 742 aaKnown RBP15.86■□□□□ 0.13
UBE3C-204ENST00000469336 MNX1P50219 401 aaPredicted RBP15.82■□□□□ 0.12
UBE3C-204ENST00000469336 GABBR2O75899 941 aa15.73■□□□□ 0.11
UBE3C-204ENST00000469336 MIER1Q8N108 512 aa15.72■□□□□ 0.11
UBE3C-204ENST00000469336 ZRANB1Q9UGI0 708 aa15.7■□□□□ 0.1
UBE3C-204ENST00000469336 NPM1P06748 294 aaKnown RBP eCLIP15.67■□□□□ 0.1
UBE3C-204ENST00000469336 PLCD3Q8N3E9 789 aa15.62■□□□□ 0.09
UBE3C-204ENST00000469336 ZNF579Q8NAF0 562 aaKnown RBP15.58■□□□□ 0.08
UBE3C-204ENST00000469336 PLEKHG5O94827 1062 aa15.57■□□□□ 0.08
UBE3C-204ENST00000469336 PHF12Q96QT6 1004 aa15.56■□□□□ 0.08
UBE3C-204ENST00000469336 PAK3O75914 559 aaPredicted RBP15.55■□□□□ 0.08
UBE3C-204ENST00000469336 TSPYL2Q9H2G4 693 aaPredicted RBP15.54■□□□□ 0.08
UBE3C-204ENST00000469336 FBXO3Q9UK99 471 aa15.5■□□□□ 0.07
UBE3C-204ENST00000469336 GALR2O43603 387 aaPredicted RBP15.47■□□□□ 0.07
UBE3C-204ENST00000469336 RASEFQ8IZ41 740 aa15.47■□□□□ 0.07
UBE3C-204ENST00000469336 POTEIP0CG38 1075 aa15.45■□□□□ 0.06
UBE3C-204ENST00000469336 VASPP50552 380 aaPredicted RBP15.4■□□□□ 0.06
UBE3C-204ENST00000469336 CCDC61Q9Y6R9 512 aa15.39■□□□□ 0.05
UBE3C-204ENST00000469336 CLCN6P51797 869 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms