RNA–Protein interactions for RNA: ENST00000586118.5

MBD1-213, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 1,012 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-213ENST00000586118 NISCHQ9Y2I1 1504 aa42.68■■■■■ 4.42
MBD1-213ENST00000586118 CCDC180Q9P1Z9 1646 aa38.13■■■■□ 3.69
MBD1-213ENST00000586118 ABCC9O60706 1549 aa37.68■■■■□ 3.62
MBD1-213ENST00000586118 RB1CC1Q8TDY2 1594 aa36.1■■■■□ 3.37
MBD1-213ENST00000586118 NACADO15069 1562 aa35.94■■■■□ 3.34
MBD1-213ENST00000586118 DCAF8L2P0C7V8 631 aa35.87■■■■□ 3.33
MBD1-213ENST00000586118 MYO15BQ96JP2 1530 aa35.6■■■■□ 3.29
MBD1-213ENST00000586118 ZCCHC6Q5VYS8 1495 aaKnown RBP35.49■■■■□ 3.27
MBD1-213ENST00000586118 DCAF1Q9Y4B6 1507 aa35.31■■■■□ 3.24
MBD1-213ENST00000586118 UNC13AQ9UPW8 1703 aa35.16■■■■□ 3.22
MBD1-213ENST00000586118 PABPN1Q86U42 306 aaKnown RBP eCLIP35.13■■■■□ 3.21
MBD1-213ENST00000586118 BICRAQ9NZM4 1560 aa34.93■■■■□ 3.18
MBD1-213ENST00000586118 DNAJC5BQ9UF47 199 aa34.82■■■■□ 3.16
MBD1-213ENST00000586118 SCRIBQ14160 1630 aa34.78■■■■□ 3.16
MBD1-213ENST00000586118 SHROOM4Q9ULL8 1493 aa34.65■■■■□ 3.14
MBD1-213ENST00000586118 EIF4G1Q04637 1599 aaKnown RBP34.11■■■■□ 3.05
MBD1-213ENST00000586118 CC2D2AQ9P2K1 1620 aa34.04■■■■□ 3.04
MBD1-213ENST00000586118 CECR2Q9BXF3 1484 aa33.91■■■■□ 3.02
MBD1-213ENST00000586118 SMARCA4P51532 1647 aa33.21■■■□□ 2.91
MBD1-213ENST00000586118 NCAPD3P42695 1498 aa33.15■■■□□ 2.9
MBD1-213ENST00000586118 BAZ1AQ9NRL2 1556 aaPredicted RBP33.15■■■□□ 2.9
MBD1-213ENST00000586118 ATAD2BQ9ULI0 1458 aa33.12■■■□□ 2.89
MBD1-213ENST00000586118 SMARCA2P51531 1590 aa33.11■■■□□ 2.89
MBD1-213ENST00000586118 HMGXB3Q12766 1538 aa33■■■□□ 2.87
MBD1-213ENST00000586118 BAZ1BQ9UIG0 1483 aaKnown RBP32.88■■■□□ 2.85
MBD1-213ENST00000586118 MROH2BQ7Z745 1585 aa32.87■■■□□ 2.85
MBD1-213ENST00000586118 PEG3Q9GZU2 1588 aa32.87■■■□□ 2.85
MBD1-213ENST00000586118 ERCC6Q03468 1493 aa32.58■■■□□ 2.81
MBD1-213ENST00000586118 WIZO95785 1651 aa32.49■■■□□ 2.79
MBD1-213ENST00000586118 NESP48681 1621 aa32.46■■■□□ 2.79
MBD1-213ENST00000586118 LAMC3Q9Y6N6 1575 aa32.37■■■□□ 2.77
MBD1-213ENST00000586118 RSF1Q96T23 1441 aaPredicted RBP32.37■■■□□ 2.77
MBD1-213ENST00000586118 CUX2O14529 1486 aa32.34■■■□□ 2.77
MBD1-213ENST00000586118 PDS5BQ9NTI5 1447 aa32.2■■■□□ 2.75
MBD1-213ENST00000586118 CADPSQ9ULU8 1353 aa32.19■■■□□ 2.74
MBD1-213ENST00000586118 TOP2AP11388 1531 aaKnown RBP32.18■■■□□ 2.74
MBD1-213ENST00000586118 THOC2Q8NI27 1593 aaKnown RBP32.07■■■□□ 2.72
MBD1-213ENST00000586118 KIF21AQ7Z4S6 1674 aa32.06■■■□□ 2.72
MBD1-213ENST00000586118 CFTRP13569 1480 aa31.91■■■□□ 2.7
MBD1-213ENST00000586118 MRC2Q9UBG0 1479 aa31.88■■■□□ 2.69
MBD1-213ENST00000586118 CEP164Q9UPV0 1460 aa31.86■■■□□ 2.69
MBD1-213ENST00000586118 FANCD2Q9BXW9 1451 aa31.84■■■□□ 2.69
MBD1-213ENST00000586118 CCDC88BA6NC98 1476 aa31.77■■■□□ 2.68
MBD1-213ENST00000586118 WDR62O43379 1518 aa31.76■■■□□ 2.68
MBD1-213ENST00000586118 DNAJC5Q9H3Z4 198 aa31.71■■■□□ 2.67
MBD1-213ENST00000586118 PRDM2Q13029 1718 aa31.61■■■□□ 2.65
MBD1-213ENST00000586118 URB2Q14146 1524 aaKnown RBP31.5■■■□□ 2.63
MBD1-213ENST00000586118 SUPT5HO00267 1087 aaKnown RBP31.32■■■□□ 2.6
MBD1-213ENST00000586118 ABCC8Q09428 1581 aa31.27■■■□□ 2.6
MBD1-213ENST00000586118 TOPBP1Q92547 1522 aa31.27■■■□□ 2.6
MBD1-213ENST00000586118 DNMBPQ6XZF7 1577 aa31.22■■■□□ 2.59
MBD1-213ENST00000586118 IFT140Q96RY7 1462 aa31.2■■■□□ 2.58
MBD1-213ENST00000586118 ZNF608Q9ULD9 1512 aaPredicted RBP31.03■■■□□ 2.56
MBD1-213ENST00000586118 POLA1P09884 1462 aaPredicted RBP30.98■■■□□ 2.55
MBD1-213ENST00000586118 EIF4G3O43432 1585 aaKnown RBP30.93■■■□□ 2.54
MBD1-213ENST00000586118 TARBP1Q13395 1621 aaKnown RBP30.92■■■□□ 2.54
MBD1-213ENST00000586118 OSCARQ8IYS5 282 aa30.9■■■□□ 2.54
MBD1-213ENST00000586118 CUX1P39880 1505 aa30.88■■■□□ 2.53
MBD1-213ENST00000586118 FGD5Q6ZNL6 1462 aa30.86■■■□□ 2.53
MBD1-213ENST00000586118 SOGA1O94964 1423 aa30.85■■■□□ 2.53
MBD1-213ENST00000586118 AQRO60306 1485 aaKnown RBP eCLIP30.83■■■□□ 2.533e-7■■■□□ 17
MBD1-213ENST00000586118 RAD54L2Q9Y4B4 1467 aa30.83■■■□□ 2.53
MBD1-213ENST00000586118 WDR97A6NE52 1622 aa30.72■■■□□ 2.51
MBD1-213ENST00000586118 TDRD9Q8NDG6 1382 aaKnown RBP30.71■■■□□ 2.51
MBD1-213ENST00000586118 FBLN2P98095 1184 aa30.6■■■□□ 2.49
MBD1-213ENST00000586118 WRNQ14191 1432 aaPredicted RBP eCLIP30.59■■■□□ 2.49
MBD1-213ENST00000586118 TRIM41Q8WV44 630 aa30.59■■■□□ 2.49
MBD1-213ENST00000586118 CHD1O14646 1710 aa30.58■■■□□ 2.49
MBD1-213ENST00000586118 SNAPC4Q5SXM2 1469 aa30.57■■■□□ 2.48
MBD1-213ENST00000586118 GRIN2BQ13224 1484 aa30.56■■■□□ 2.48
MBD1-213ENST00000586118 ABCA10Q8WWZ4 1543 aa30.54■■■□□ 2.48
MBD1-213ENST00000586118 TOP2BQ02880 1626 aa30.53■■■□□ 2.48
MBD1-213ENST00000586118 MAGI1Q96QZ7 1491 aaPredicted RBP30.52■■■□□ 2.48
MBD1-213ENST00000586118 BIVM-ERCC5R4GMW8 1640 aa30.51■■■□□ 2.48
MBD1-213ENST00000586118 GAPVD1Q14C86 1478 aa30.5■■■□□ 2.47
MBD1-213ENST00000586118 SYNJ1O43426 1573 aa30.49■■■□□ 2.47
MBD1-213ENST00000586118 CHMP7Q8WUX9 453 aaPredicted RBP30.44■■■□□ 2.46
MBD1-213ENST00000586118 ABCA5Q8WWZ7 1642 aa30.44■■■□□ 2.46
MBD1-213ENST00000586118 PBRM1Q86U86 1689 aa30.43■■■□□ 2.46
MBD1-213ENST00000586118 RIMBP3CA6NJZ7 1639 aa30.43■■■□□ 2.46
MBD1-213ENST00000586118 RIMBP3BA6NNM3 1639 aa30.43■■■□□ 2.46
MBD1-213ENST00000586118 RIMBP3Q9UFD9 1639 aa30.43■■■□□ 2.46
MBD1-213ENST00000586118 ARHGEF11O15085 1522 aa30.41■■■□□ 2.46
MBD1-213ENST00000586118 SYNJ2O15056 1496 aa30.4■■■□□ 2.46
MBD1-213ENST00000586118 CLASP1Q7Z460 1538 aa30.26■■■□□ 2.43
MBD1-213ENST00000586118 ADAMTS12P58397 1594 aa30.21■■■□□ 2.43
MBD1-213ENST00000586118 ERICH3Q5RHP9 1530 aa30.18■■■□□ 2.42
MBD1-213ENST00000586118 GRIN2AQ12879 1464 aa30.16■■■□□ 2.42
MBD1-213ENST00000586118 FHAD1B1AJZ9 1412 aa30.14■■■□□ 2.42
MBD1-213ENST00000586118 CYB5RLQ6IPT4 315 aa30.14■■■□□ 2.42
MBD1-213ENST00000586118 ARAP1Q96P48 1450 aa30.12■■■□□ 2.41
MBD1-213ENST00000586118 NUP160Q12769 1436 aa30.02■■■□□ 2.4
MBD1-213ENST00000586118 CEP170Q5SW79 1584 aa29.99■■■□□ 2.39
MBD1-213ENST00000586118 KIF27Q86VH2 1401 aa29.99■■■□□ 2.39
MBD1-213ENST00000586118 IGF1RP08069 1367 aa29.85■■■□□ 2.37
MBD1-213ENST00000586118 CUL7Q14999 1698 aa29.85■■■□□ 2.37
MBD1-213ENST00000586118 SHROOM2Q13796 1616 aa29.81■■■□□ 2.36
MBD1-213ENST00000586118 ERCC6L2Q5T890 1561 aa29.77■■■□□ 2.36
MBD1-213ENST00000586118 RUSC2Q8N2Y8 1516 aa29.76■■■□□ 2.36
MBD1-213ENST00000586118 PRG4Q92954 1404 aaPredicted RBP29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms