RNA–Protein interactions for RNA: ENST00000382948.9

MBD1-206, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MBD1, Length 2,434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-206ENST00000382948 NISCHQ9Y2I1 1504 aa38.75■■■■□ 3.79
MBD1-206ENST00000382948 CCDC180Q9P1Z9 1646 aa33.25■■■□□ 2.91
MBD1-206ENST00000382948 ZCCHC6Q5VYS8 1495 aaKnown RBP32.75■■■□□ 2.83
MBD1-206ENST00000382948 SHROOM4Q9ULL8 1493 aa32.61■■■□□ 2.81
MBD1-206ENST00000382948 DCAF8L2P0C7V8 631 aa31.95■■■□□ 2.7
MBD1-206ENST00000382948 DCAF1Q9Y4B6 1507 aa31.9■■■□□ 2.7
MBD1-206ENST00000382948 SUPT5HO00267 1087 aaKnown RBP31.85■■■□□ 2.69
MBD1-206ENST00000382948 MYO15BQ96JP2 1530 aa31.1■■■□□ 2.57
MBD1-206ENST00000382948 ABCC9O60706 1549 aa31.02■■■□□ 2.56
MBD1-206ENST00000382948 SCRIBQ14160 1630 aa30.94■■■□□ 2.54
MBD1-206ENST00000382948 CHIC1Q5VXU3 224 aa30.9■■■□□ 2.54
MBD1-206ENST00000382948 NACADO15069 1562 aa30.72■■■□□ 2.51
MBD1-206ENST00000382948 RSF1Q96T23 1441 aaPredicted RBP30.5■■■□□ 2.47
MBD1-206ENST00000382948 RB1CC1Q8TDY2 1594 aa30.27■■■□□ 2.44
MBD1-206ENST00000382948 CECR2Q9BXF3 1484 aa30.15■■■□□ 2.42
MBD1-206ENST00000382948 MROH2BQ7Z745 1585 aa30.07■■■□□ 2.4
MBD1-206ENST00000382948 WIZO95785 1651 aa29.93■■■□□ 2.38
MBD1-206ENST00000382948 LOC105371045A0A1W2PR82 267 aa29.88■■■□□ 2.37
MBD1-206ENST00000382948 UNC13AQ9UPW8 1703 aa29.87■■■□□ 2.37
MBD1-206ENST00000382948 BAZ1AQ9NRL2 1556 aaPredicted RBP29.83■■■□□ 2.37
MBD1-206ENST00000382948 TRIM41Q8WV44 630 aa29.77■■■□□ 2.36
MBD1-206ENST00000382948 SMARCA4P51532 1647 aa29.62■■■□□ 2.33
MBD1-206ENST00000382948 PCGF6Q9BYE7 350 aa29.61■■■□□ 2.33
MBD1-206ENST00000382948 TOP2AP11388 1531 aaKnown RBP29.51■■■□□ 2.31
MBD1-206ENST00000382948 HRCP23327 699 aa29.49■■■□□ 2.31
MBD1-206ENST00000382948 EIF4G1Q04637 1599 aaKnown RBP29.47■■■□□ 2.31
MBD1-206ENST00000382948 FAM9AQ8IZU1 332 aaPredicted RBP29.41■■■□□ 2.3
MBD1-206ENST00000382948 BICRAQ9NZM4 1560 aa29.41■■■□□ 2.3
MBD1-206ENST00000382948 SMARCA2P51531 1590 aa29.32■■■□□ 2.28
MBD1-206ENST00000382948 CCDC88BA6NC98 1476 aa29.28■■■□□ 2.28
MBD1-206ENST00000382948 PABPN1Q86U42 306 aaKnown RBP eCLIP29.26■■■□□ 2.27
MBD1-206ENST00000382948 TRIM26Q12899 539 aaPredicted RBP29.21■■■□□ 2.27
MBD1-206ENST00000382948 ABCC8Q09428 1581 aa29.11■■■□□ 2.25
MBD1-206ENST00000382948 PEG3Q9GZU2 1588 aa29.1■■■□□ 2.25
MBD1-206ENST00000382948 EHMT2Q96KQ7 1210 aa29.08■■■□□ 2.25
MBD1-206ENST00000382948 ATAD2BQ9ULI0 1458 aa28.85■■■□□ 2.21
MBD1-206ENST00000382948 PPARGC1BQ86YN6 1023 aaKnown RBP28.81■■■□□ 2.2
MBD1-206ENST00000382948 BAZ1BQ9UIG0 1483 aaKnown RBP28.78■■■□□ 2.2
MBD1-206ENST00000382948 SOGA1O94964 1423 aa28.73■■■□□ 2.19
MBD1-206ENST00000382948 EEA1Q15075 1411 aa28.7■■■□□ 2.18
MBD1-206ENST00000382948 WRNQ14191 1432 aaPredicted RBP eCLIP28.68■■■□□ 2.18
MBD1-206ENST00000382948 RUSC2Q8N2Y8 1516 aa28.6■■■□□ 2.17
MBD1-206ENST00000382948 SYNJ1O43426 1573 aa28.58■■■□□ 2.17
MBD1-206ENST00000382948 CSRNP3Q8WYN3 585 aa28.55■■■□□ 2.16
MBD1-206ENST00000382948 CEP162Q5TB80 1403 aa28.53■■■□□ 2.16
MBD1-206ENST00000382948 TNIKQ9UKE5 1360 aa28.52■■■□□ 2.16
MBD1-206ENST00000382948 ZEB1P37275 1124 aaPredicted RBP28.5■■■□□ 2.15
MBD1-206ENST00000382948 GOLGA3Q08378 1498 aa28.45■■■□□ 2.14
MBD1-206ENST00000382948 HMGXB3Q12766 1538 aa28.41■■■□□ 2.14
MBD1-206ENST00000382948 UBTFP17480 764 aaKnown RBP28.38■■■□□ 2.13
MBD1-206ENST00000382948 NCAPD3P42695 1498 aa28.36■■■□□ 2.13
MBD1-206ENST00000382948 KIF21BO75037 1637 aa28.34■■■□□ 2.13
MBD1-206ENST00000382948 CEP164Q9UPV0 1460 aa28.32■■■□□ 2.12
MBD1-206ENST00000382948 TOP2BQ02880 1626 aa28.31■■■□□ 2.12
MBD1-206ENST00000382948 BIVM-ERCC5R4GMW8 1640 aa28.25■■■□□ 2.11
MBD1-206ENST00000382948 TTBK1Q5TCY1 1321 aaPredicted RBP28.1■■■□□ 2.09
MBD1-206ENST00000382948 RAPGEF2Q9Y4G8 1499 aa28.09■■■□□ 2.09
MBD1-206ENST00000382948 CLIP1P30622 1438 aa28.06■■■□□ 2.08
MBD1-206ENST00000382948 CFTRP13569 1480 aa28.06■■■□□ 2.08
MBD1-206ENST00000382948 CUX1P39880 1505 aa28.03■■■□□ 2.08
MBD1-206ENST00000382948 PRDM2Q13029 1718 aa28.02■■■□□ 2.08
MBD1-206ENST00000382948 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.02■■■□□ 2.08
MBD1-206ENST00000382948 CC2D2AQ9P2K1 1620 aa28■■■□□ 2.07
MBD1-206ENST00000382948 CCER1Q8TC90 406 aaPredicted RBP27.97■■■□□ 2.07
MBD1-206ENST00000382948 ERICH3Q5RHP9 1530 aa27.94■■■□□ 2.06
MBD1-206ENST00000382948 VPS8Q8N3P4 1428 aa27.93■■■□□ 2.06
MBD1-206ENST00000382948 PRXQ9BXM0 1461 aa27.89■■■□□ 2.06
MBD1-206ENST00000382948 KIF27Q86VH2 1401 aa27.84■■■□□ 2.05
MBD1-206ENST00000382948 DNAJC5BQ9UF47 199 aa27.8■■■□□ 2.04
MBD1-206ENST00000382948 RANGAP1P46060 587 aaPredicted RBP27.78■■■□□ 2.04
MBD1-206ENST00000382948 CADPSQ9ULU8 1353 aa27.76■■■□□ 2.03
MBD1-206ENST00000382948 APLP2Q06481 763 aa27.73■■■□□ 2.03
MBD1-206ENST00000382948 ARAP1Q96P48 1450 aa27.66■■■□□ 2.02
MBD1-206ENST00000382948 CUX2O14529 1486 aa27.6■■■□□ 2.01
MBD1-206ENST00000382948 FGD5Q6ZNL6 1462 aa27.57■■■□□ 2
MBD1-206ENST00000382948 HNRNPUL2Q1KMD3 747 aaKnown RBP27.54■■■□□ 2
MBD1-206ENST00000382948 FANCD2Q9BXW9 1451 aa27.51■■□□□ 1.99
MBD1-206ENST00000382948 IGF1RP08069 1367 aa27.49■■□□□ 1.99
MBD1-206ENST00000382948 ARHGAP35Q9NRY4 1499 aa27.46■■□□□ 1.99
MBD1-206ENST00000382948 DNMBPQ6XZF7 1577 aa27.41■■□□□ 1.98
MBD1-206ENST00000382948 CARMIL1Q5VZK9 1371 aa27.39■■□□□ 1.98
MBD1-206ENST00000382948 KANK4Q5T7N3 995 aaPredicted RBP27.36■■□□□ 1.97
MBD1-206ENST00000382948 NESP48681 1621 aa27.34■■□□□ 1.97
MBD1-206ENST00000382948 TOPBP1Q92547 1522 aa27.32■■□□□ 1.96
MBD1-206ENST00000382948 POLA1P09884 1462 aaPredicted RBP27.28■■□□□ 1.96
MBD1-206ENST00000382948 ABCA10Q8WWZ4 1543 aa27.28■■□□□ 1.96
MBD1-206ENST00000382948 DIEXFQ68CQ4 756 aaKnown RBP27.26■■□□□ 1.95
MBD1-206ENST00000382948 RAD54L2Q9Y4B4 1467 aa27.26■■□□□ 1.95
MBD1-206ENST00000382948 LAMC3Q9Y6N6 1575 aa27.26■■□□□ 1.95
MBD1-206ENST00000382948 RRBP1Q9P2E9 1410 aaKnown RBP27.25■■□□□ 1.95
MBD1-206ENST00000382948 TIAM1Q13009 1591 aa27.18■■□□□ 1.94
MBD1-206ENST00000382948 CUL7Q14999 1698 aa27.17■■□□□ 1.94
MBD1-206ENST00000382948 MAP3K1Q13233 1512 aa27.17■■□□□ 1.94
MBD1-206ENST00000382948 ZNF316A6NFI3 1004 aaPredicted RBP27.16■■□□□ 1.94
MBD1-206ENST00000382948 WDR97A6NE52 1622 aa27.14■■□□□ 1.93
MBD1-206ENST00000382948 URB2Q14146 1524 aaKnown RBP27.12■■□□□ 1.93
MBD1-206ENST00000382948 CCNB3Q8WWL7 1395 aa27.12■■□□□ 1.93
MBD1-206ENST00000382948 CTTNBP2Q8WZ74 1663 aa27.1■■□□□ 1.93
MBD1-206ENST00000382948 FHAD1B1AJZ9 1412 aa27.09■■□□□ 1.93
MBD1-206ENST00000382948 DHX57Q6P158 1386 aaKnown RBP27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms