RNA–Protein interactions for RNA: ENST00000475514.5

REPIN1-208, Transcript of replication initiator 1, humanhuman

TSL 5

Gene REPIN1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REPIN1-208ENST00000475514 NISCHQ9Y2I1 1504 aa51.16■■■■■ 5.78
REPIN1-208ENST00000475514 ABCC9O60706 1549 aa46.62■■■■■ 5.05
REPIN1-208ENST00000475514 CCDC180Q9P1Z9 1646 aa46.13■■■■■ 4.97
REPIN1-208ENST00000475514 RB1CC1Q8TDY2 1594 aa44.14■■■■■ 4.66
REPIN1-208ENST00000475514 DNAJC5BQ9UF47 199 aa44.1■■■■■ 4.65
REPIN1-208ENST00000475514 NACADO15069 1562 aa43.69■■■■■ 4.58
REPIN1-208ENST00000475514 DCAF8L2P0C7V8 631 aa43.48■■■■■ 4.55
REPIN1-208ENST00000475514 PABPN1Q86U42 306 aaKnown RBP eCLIP43.33■■■■■ 4.53
REPIN1-208ENST00000475514 UNC13AQ9UPW8 1703 aa43.22■■■■■ 4.51
REPIN1-208ENST00000475514 BICRAQ9NZM4 1560 aa42.87■■■■■ 4.45
REPIN1-208ENST00000475514 MYO15BQ96JP2 1530 aa42.87■■■■■ 4.45
REPIN1-208ENST00000475514 ZCCHC6Q5VYS8 1495 aaKnown RBP42.3■■■■■ 4.36
REPIN1-208ENST00000475514 DCAF1Q9Y4B6 1507 aa42.17■■■■■ 4.34
REPIN1-208ENST00000475514 SHROOM4Q9ULL8 1493 aa42.15■■■■■ 4.34
REPIN1-208ENST00000475514 CC2D2AQ9P2K1 1620 aa42.08■■■■■ 4.33
REPIN1-208ENST00000475514 SCRIBQ14160 1630 aa42.07■■■■■ 4.33
REPIN1-208ENST00000475514 CECR2Q9BXF3 1484 aa42.01■■■■■ 4.32
REPIN1-208ENST00000475514 EIF4G1Q04637 1599 aaKnown RBP41.86■■■■■ 4.29
REPIN1-208ENST00000475514 DNAJC5Q9H3Z4 198 aa40.79■■■■■ 4.12
REPIN1-208ENST00000475514 NCAPD3P42695 1498 aa40.31■■■■■ 4.04
REPIN1-208ENST00000475514 CUX2O14529 1486 aa40.3■■■■■ 4.04
REPIN1-208ENST00000475514 ERCC6Q03468 1493 aa40.28■■■■■ 4.04
REPIN1-208ENST00000475514 ATAD2BQ9ULI0 1458 aa40.16■■■■■ 4.02
REPIN1-208ENST00000475514 SMARCA4P51532 1647 aa40.05■■■■■ 4
REPIN1-208ENST00000475514 SMARCA2P51531 1590 aa40.03■■■■■ 4
REPIN1-208ENST00000475514 HMGXB3Q12766 1538 aa40■■■■□ 3.99
REPIN1-208ENST00000475514 NESP48681 1621 aa39.92■■■■□ 3.98
REPIN1-208ENST00000475514 BAZ1BQ9UIG0 1483 aaKnown RBP39.78■■■■□ 3.96
REPIN1-208ENST00000475514 BAZ1AQ9NRL2 1556 aaPredicted RBP39.75■■■■□ 3.95
REPIN1-208ENST00000475514 THOC2Q8NI27 1593 aaKnown RBP39.59■■■■□ 3.93
REPIN1-208ENST00000475514 PEG3Q9GZU2 1588 aa39.59■■■■□ 3.93
REPIN1-208ENST00000475514 LAMC3Q9Y6N6 1575 aa39.52■■■■□ 3.92
REPIN1-208ENST00000475514 MROH2BQ7Z745 1585 aa39.45■■■■□ 3.91
REPIN1-208ENST00000475514 KIF21AQ7Z4S6 1674 aa39.43■■■■□ 3.9
REPIN1-208ENST00000475514 PDS5BQ9NTI5 1447 aa39.29■■■■□ 3.88
REPIN1-208ENST00000475514 CADPSQ9ULU8 1353 aa39.08■■■■□ 3.85
REPIN1-208ENST00000475514 MRC2Q9UBG0 1479 aa39■■■■□ 3.83
REPIN1-208ENST00000475514 WIZO95785 1651 aa39■■■■□ 3.83
REPIN1-208ENST00000475514 TRIM41Q8WV44 630 aa38.93■■■■□ 3.82
REPIN1-208ENST00000475514 WDR62O43379 1518 aa38.92■■■■□ 3.82
REPIN1-208ENST00000475514 CEP164Q9UPV0 1460 aa38.77■■■■□ 3.8
REPIN1-208ENST00000475514 FANCD2Q9BXW9 1451 aa38.68■■■■□ 3.78
REPIN1-208ENST00000475514 CFTRP13569 1480 aa38.54■■■■□ 3.76
REPIN1-208ENST00000475514 RSF1Q96T23 1441 aaPredicted RBP38.43■■■■□ 3.74
REPIN1-208ENST00000475514 TOP2AP11388 1531 aaKnown RBP38.42■■■■□ 3.74
REPIN1-208ENST00000475514 URB2Q14146 1524 aaKnown RBP38.4■■■■□ 3.74
REPIN1-208ENST00000475514 OSCARQ8IYS5 282 aa38.39■■■■□ 3.74
REPIN1-208ENST00000475514 PRDM2Q13029 1718 aa38.23■■■■□ 3.71
REPIN1-208ENST00000475514 ZNF608Q9ULD9 1512 aaPredicted RBP38.02■■■■□ 3.68
REPIN1-208ENST00000475514 RIMBP3CA6NJZ7 1639 aa38.01■■■■□ 3.67
REPIN1-208ENST00000475514 RIMBP3BA6NNM3 1639 aa38.01■■■■□ 3.67
REPIN1-208ENST00000475514 RIMBP3Q9UFD9 1639 aa38.01■■■■□ 3.67
REPIN1-208ENST00000475514 CCDC88BA6NC98 1476 aa37.99■■■■□ 3.67
REPIN1-208ENST00000475514 IFT140Q96RY7 1462 aa37.98■■■■□ 3.67
REPIN1-208ENST00000475514 TOPBP1Q92547 1522 aa37.9■■■■□ 3.66
REPIN1-208ENST00000475514 ARHGEF11O15085 1522 aa37.82■■■■□ 3.64
REPIN1-208ENST00000475514 EIF4G3O43432 1585 aaKnown RBP37.8■■■■□ 3.64
REPIN1-208ENST00000475514 ABCC8Q09428 1581 aa37.74■■■■□ 3.63
REPIN1-208ENST00000475514 DNMBPQ6XZF7 1577 aa37.72■■■■□ 3.63
REPIN1-208ENST00000475514 CHD1O14646 1710 aa37.65■■■■□ 3.62
REPIN1-208ENST00000475514 AQRO60306 1485 aaKnown RBP eCLIP37.61■■■■□ 3.612e-10■■■■■ 52.5
REPIN1-208ENST00000475514 TARBP1Q13395 1621 aaKnown RBP37.61■■■■□ 3.61
REPIN1-208ENST00000475514 CYB5RLQ6IPT4 315 aa37.57■■■■□ 3.6
REPIN1-208ENST00000475514 FBLN2P98095 1184 aa37.49■■■■□ 3.59
REPIN1-208ENST00000475514 POLA1P09884 1462 aaPredicted RBP37.48■■■■□ 3.59
REPIN1-208ENST00000475514 ARAP1Q96P48 1450 aa37.4■■■■□ 3.58
REPIN1-208ENST00000475514 RAD54L2Q9Y4B4 1467 aa37.39■■■■□ 3.58
REPIN1-208ENST00000475514 TRHP20396 242 aaPredicted RBP37.33■■■■□ 3.57
REPIN1-208ENST00000475514 TDRD9Q8NDG6 1382 aaKnown RBP37.3■■■■□ 3.56
REPIN1-208ENST00000475514 SOGA1O94964 1423 aa37.29■■■■□ 3.56
REPIN1-208ENST00000475514 SNAPC4Q5SXM2 1469 aa37.21■■■■□ 3.55
REPIN1-208ENST00000475514 FGD5Q6ZNL6 1462 aa37.2■■■■□ 3.54
REPIN1-208ENST00000475514 WDR97A6NE52 1622 aa37.14■■■■□ 3.54
REPIN1-208ENST00000475514 CLASP1Q7Z460 1538 aa37.12■■■■□ 3.53
REPIN1-208ENST00000475514 CUX1P39880 1505 aa37.1■■■■□ 3.53
REPIN1-208ENST00000475514 CHMP7Q8WUX9 453 aaPredicted RBP37.09■■■■□ 3.53
REPIN1-208ENST00000475514 SYNJ1O43426 1573 aa37.08■■■■□ 3.53
REPIN1-208ENST00000475514 MAGI1Q96QZ7 1491 aaPredicted RBP37.06■■■■□ 3.52
REPIN1-208ENST00000475514 GRIN2BQ13224 1484 aa37.02■■■■□ 3.52
REPIN1-208ENST00000475514 SYNJ2O15056 1496 aa36.94■■■■□ 3.5
REPIN1-208ENST00000475514 PBRM1Q86U86 1689 aa36.93■■■■□ 3.5
REPIN1-208ENST00000475514 GAPVD1Q14C86 1478 aa36.84■■■■□ 3.49
REPIN1-208ENST00000475514 ABCA5Q8WWZ7 1642 aa36.74■■■■□ 3.47
REPIN1-208ENST00000475514 ABCA10Q8WWZ4 1543 aa36.71■■■■□ 3.47
REPIN1-208ENST00000475514 AEBP2Q6ZN18 517 aaPredicted RBP36.58■■■■□ 3.45
REPIN1-208ENST00000475514 ERCC6L2Q5T890 1561 aa36.56■■■■□ 3.44
REPIN1-208ENST00000475514 GRIN2AQ12879 1464 aa36.56■■■■□ 3.44
REPIN1-208ENST00000475514 ADAMTS12P58397 1594 aa36.5■■■■□ 3.43
REPIN1-208ENST00000475514 SUPT5HO00267 1087 aaKnown RBP36.48■■■■□ 3.43
REPIN1-208ENST00000475514 WRNQ14191 1432 aaPredicted RBP eCLIP36.48■■■■□ 3.437e-10■■■■■ 33.4
REPIN1-208ENST00000475514 CEP170Q5SW79 1584 aa36.47■■■■□ 3.43
REPIN1-208ENST00000475514 NUP160Q12769 1436 aa36.42■■■■□ 3.42
REPIN1-208ENST00000475514 BIVM-ERCC5R4GMW8 1640 aa36.38■■■■□ 3.41
REPIN1-208ENST00000475514 TOP2BQ02880 1626 aa36.37■■■■□ 3.41
REPIN1-208ENST00000475514 SHROOM2Q13796 1616 aa36.34■■■■□ 3.41
REPIN1-208ENST00000475514 FHAD1B1AJZ9 1412 aa36.34■■■■□ 3.41
REPIN1-208ENST00000475514 ERICH3Q5RHP9 1530 aa36.24■■■■□ 3.39
REPIN1-208ENST00000475514 KIF13AQ9H1H9 1805 aa36.18■■■■□ 3.38
REPIN1-208ENST00000475514 PRG4Q92954 1404 aaPredicted RBP36.15■■■■□ 3.38
REPIN1-208ENST00000475514 JPH4Q96JJ6 628 aa36.06■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms