RNA–Protein interactions for RNA: ENST00000482680.1

REPIN1-210, Transcript of replication initiator 1, humanhuman

TSL 2 BASIC

Gene REPIN1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REPIN1-210ENST00000482680 NISCHQ9Y2I1 1504 aa46.82■■■■■ 5.09
REPIN1-210ENST00000482680 ABCC9O60706 1549 aa42.66■■■■■ 4.42
REPIN1-210ENST00000482680 CCDC180Q9P1Z9 1646 aa42.24■■■■■ 4.35
REPIN1-210ENST00000482680 DNAJC5BQ9UF47 199 aa40.49■■■■■ 4.07
REPIN1-210ENST00000482680 RB1CC1Q8TDY2 1594 aa40.41■■■■■ 4.06
REPIN1-210ENST00000482680 NACADO15069 1562 aa40.03■■■■■ 4
REPIN1-210ENST00000482680 DCAF8L2P0C7V8 631 aa39.65■■■■□ 3.94
REPIN1-210ENST00000482680 PABPN1Q86U42 306 aaKnown RBP eCLIP39.63■■■■□ 3.93
REPIN1-210ENST00000482680 UNC13AQ9UPW8 1703 aa39.56■■■■□ 3.92
REPIN1-210ENST00000482680 MYO15BQ96JP2 1530 aa39.35■■■■□ 3.89
REPIN1-210ENST00000482680 BICRAQ9NZM4 1560 aa39.29■■■■□ 3.88
REPIN1-210ENST00000482680 ZCCHC6Q5VYS8 1495 aaKnown RBP38.7■■■■□ 3.79
REPIN1-210ENST00000482680 SHROOM4Q9ULL8 1493 aa38.69■■■■□ 3.78
REPIN1-210ENST00000482680 DCAF1Q9Y4B6 1507 aa38.66■■■■□ 3.78
REPIN1-210ENST00000482680 CC2D2AQ9P2K1 1620 aa38.54■■■■□ 3.76
REPIN1-210ENST00000482680 CECR2Q9BXF3 1484 aa38.48■■■■□ 3.75
REPIN1-210ENST00000482680 SCRIBQ14160 1630 aa38.41■■■■□ 3.74
REPIN1-210ENST00000482680 EIF4G1Q04637 1599 aaKnown RBP38.34■■■■□ 3.73
REPIN1-210ENST00000482680 DNAJC5Q9H3Z4 198 aa37.52■■■■□ 3.6
REPIN1-210ENST00000482680 CUX2O14529 1486 aa36.98■■■■□ 3.51
REPIN1-210ENST00000482680 NCAPD3P42695 1498 aa36.97■■■■□ 3.51
REPIN1-210ENST00000482680 ERCC6Q03468 1493 aa36.84■■■■□ 3.49
REPIN1-210ENST00000482680 ATAD2BQ9ULI0 1458 aa36.77■■■■□ 3.48
REPIN1-210ENST00000482680 HMGXB3Q12766 1538 aa36.64■■■■□ 3.46
REPIN1-210ENST00000482680 SMARCA2P51531 1590 aa36.64■■■■□ 3.46
REPIN1-210ENST00000482680 SMARCA4P51532 1647 aa36.63■■■■□ 3.45
REPIN1-210ENST00000482680 NESP48681 1621 aa36.53■■■■□ 3.44
REPIN1-210ENST00000482680 BAZ1BQ9UIG0 1483 aaKnown RBP36.37■■■■□ 3.41
REPIN1-210ENST00000482680 BAZ1AQ9NRL2 1556 aaPredicted RBP36.36■■■■□ 3.41
REPIN1-210ENST00000482680 PEG3Q9GZU2 1588 aa36.3■■■■□ 3.4
REPIN1-210ENST00000482680 THOC2Q8NI27 1593 aaKnown RBP36.27■■■■□ 3.4
REPIN1-210ENST00000482680 LAMC3Q9Y6N6 1575 aa36.2■■■■□ 3.39
REPIN1-210ENST00000482680 MROH2BQ7Z745 1585 aa36.07■■■■□ 3.37
REPIN1-210ENST00000482680 KIF21AQ7Z4S6 1674 aa36.06■■■■□ 3.36
REPIN1-210ENST00000482680 PDS5BQ9NTI5 1447 aa35.99■■■■□ 3.35
REPIN1-210ENST00000482680 CADPSQ9ULU8 1353 aa35.8■■■■□ 3.32
REPIN1-210ENST00000482680 MRC2Q9UBG0 1479 aa35.71■■■■□ 3.31
REPIN1-210ENST00000482680 WDR62O43379 1518 aa35.66■■■■□ 3.3
REPIN1-210ENST00000482680 WIZO95785 1651 aa35.62■■■■□ 3.29
REPIN1-210ENST00000482680 TRIM41Q8WV44 630 aa35.61■■■■□ 3.29
REPIN1-210ENST00000482680 CEP164Q9UPV0 1460 aa35.47■■■■□ 3.27
REPIN1-210ENST00000482680 FANCD2Q9BXW9 1451 aa35.39■■■■□ 3.26
REPIN1-210ENST00000482680 CFTRP13569 1480 aa35.31■■■■□ 3.24
REPIN1-210ENST00000482680 OSCARQ8IYS5 282 aa35.2■■■■□ 3.23
REPIN1-210ENST00000482680 URB2Q14146 1524 aaKnown RBP35.15■■■■□ 3.22
REPIN1-210ENST00000482680 RSF1Q96T23 1441 aaPredicted RBP35.15■■■■□ 3.22
REPIN1-210ENST00000482680 TOP2AP11388 1531 aaKnown RBP35.12■■■■□ 3.21
REPIN1-210ENST00000482680 PRDM2Q13029 1718 aa34.94■■■■□ 3.18
REPIN1-210ENST00000482680 RIMBP3CA6NJZ7 1639 aa34.82■■■■□ 3.16
REPIN1-210ENST00000482680 RIMBP3BA6NNM3 1639 aa34.82■■■■□ 3.16
REPIN1-210ENST00000482680 RIMBP3Q9UFD9 1639 aa34.82■■■■□ 3.16
REPIN1-210ENST00000482680 ZNF608Q9ULD9 1512 aaPredicted RBP34.79■■■■□ 3.16
REPIN1-210ENST00000482680 IFT140Q96RY7 1462 aa34.78■■■■□ 3.16
REPIN1-210ENST00000482680 CCDC88BA6NC98 1476 aa34.74■■■■□ 3.15
REPIN1-210ENST00000482680 TOPBP1Q92547 1522 aa34.68■■■■□ 3.14
REPIN1-210ENST00000482680 ARHGEF11O15085 1522 aa34.65■■■■□ 3.14
REPIN1-210ENST00000482680 EIF4G3O43432 1585 aaKnown RBP34.57■■■■□ 3.13
REPIN1-210ENST00000482680 ABCC8Q09428 1581 aa34.57■■■■□ 3.12
REPIN1-210ENST00000482680 DNMBPQ6XZF7 1577 aa34.51■■■■□ 3.12
REPIN1-210ENST00000482680 TARBP1Q13395 1621 aaKnown RBP34.44■■■■□ 3.1
REPIN1-210ENST00000482680 CHD1O14646 1710 aa34.42■■■■□ 3.1
REPIN1-210ENST00000482680 AQRO60306 1485 aaKnown RBP eCLIP34.41■■■■□ 3.12e-10■■■■■ 52.5
REPIN1-210ENST00000482680 CYB5RLQ6IPT4 315 aa34.4■■■■□ 3.1
REPIN1-210ENST00000482680 POLA1P09884 1462 aaPredicted RBP34.29■■■■□ 3.08
REPIN1-210ENST00000482680 ARAP1Q96P48 1450 aa34.27■■■■□ 3.08
REPIN1-210ENST00000482680 FBLN2P98095 1184 aa34.23■■■■□ 3.07
REPIN1-210ENST00000482680 RAD54L2Q9Y4B4 1467 aa34.17■■■■□ 3.06
REPIN1-210ENST00000482680 TRHP20396 242 aaPredicted RBP34.14■■■■□ 3.06
REPIN1-210ENST00000482680 SOGA1O94964 1423 aa34.12■■■■□ 3.05
REPIN1-210ENST00000482680 TDRD9Q8NDG6 1382 aaKnown RBP34.11■■■■□ 3.05
REPIN1-210ENST00000482680 WDR97A6NE52 1622 aa34.04■■■■□ 3.04
REPIN1-210ENST00000482680 SNAPC4Q5SXM2 1469 aa34.03■■■■□ 3.04
REPIN1-210ENST00000482680 CLASP1Q7Z460 1538 aa34.01■■■■□ 3.04
REPIN1-210ENST00000482680 FGD5Q6ZNL6 1462 aa34.01■■■■□ 3.03
REPIN1-210ENST00000482680 MAGI1Q96QZ7 1491 aaPredicted RBP33.94■■■■□ 3.02
REPIN1-210ENST00000482680 SYNJ1O43426 1573 aa33.93■■■■□ 3.02
REPIN1-210ENST00000482680 CHMP7Q8WUX9 453 aaPredicted RBP33.92■■■■□ 3.02
REPIN1-210ENST00000482680 CUX1P39880 1505 aa33.91■■■■□ 3.02
REPIN1-210ENST00000482680 GRIN2BQ13224 1484 aa33.88■■■■□ 3.01
REPIN1-210ENST00000482680 SYNJ2O15056 1496 aa33.82■■■■□ 3.01
REPIN1-210ENST00000482680 PBRM1Q86U86 1689 aa33.74■■■□□ 2.99
REPIN1-210ENST00000482680 GAPVD1Q14C86 1478 aa33.69■■■□□ 2.98
REPIN1-210ENST00000482680 ABCA5Q8WWZ7 1642 aa33.61■■■□□ 2.97
REPIN1-210ENST00000482680 ABCA10Q8WWZ4 1543 aa33.61■■■□□ 2.97
REPIN1-210ENST00000482680 AEBP2Q6ZN18 517 aaPredicted RBP33.48■■■□□ 2.95
REPIN1-210ENST00000482680 ERCC6L2Q5T890 1561 aa33.46■■■□□ 2.95
REPIN1-210ENST00000482680 GRIN2AQ12879 1464 aa33.45■■■□□ 2.95
REPIN1-210ENST00000482680 ADAMTS12P58397 1594 aa33.38■■■□□ 2.93
REPIN1-210ENST00000482680 CEP170Q5SW79 1584 aa33.37■■■□□ 2.93
REPIN1-210ENST00000482680 NUP160Q12769 1436 aa33.36■■■□□ 2.93
REPIN1-210ENST00000482680 WRNQ14191 1432 aaPredicted RBP eCLIP33.35■■■□□ 2.937e-10■■■■■ 33.4
REPIN1-210ENST00000482680 SHROOM2Q13796 1616 aa33.3■■■□□ 2.92
REPIN1-210ENST00000482680 BIVM-ERCC5R4GMW8 1640 aa33.26■■■□□ 2.91
REPIN1-210ENST00000482680 FHAD1B1AJZ9 1412 aa33.25■■■□□ 2.91
REPIN1-210ENST00000482680 TOP2BQ02880 1626 aa33.24■■■□□ 2.91
REPIN1-210ENST00000482680 SUPT5HO00267 1087 aaKnown RBP33.17■■■□□ 2.9
REPIN1-210ENST00000482680 ERICH3Q5RHP9 1530 aa33.17■■■□□ 2.9
REPIN1-210ENST00000482680 KIF13AQ9H1H9 1805 aa33.12■■■□□ 2.89
REPIN1-210ENST00000482680 PRG4Q92954 1404 aaPredicted RBP33.06■■■□□ 2.88
REPIN1-210ENST00000482680 JPH4Q96JJ6 628 aa33.01■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms