Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.433e-7■■■■□ 25.2
NCBP2P52298 PCSK6-208ENST00000559417 1035 ntTSL 516.57■□□□□ 0.243e-7■■■■□ 25.2
NCBP2P52298 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.123e-7■■■■□ 25.2
NCBP2P52298 GTF2E2-205ENST00000523499 768 ntTSL 415.67■□□□□ 0.13e-7■■■■□ 25.2
NCBP2P52298 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.073e-7■■■■□ 25.2
NCBP2P52298 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.053e-7■■■■□ 25.2
NCBP2P52298 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.053e-7■■■■□ 25.2
NCBP2P52298 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.033e-7■■■■□ 25.2
NCBP2P52298 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.023e-7■■■■□ 25.2
NCBP2P52298 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.16■□□□□ 0.023e-7■■■■□ 25.2
NCBP2P52298 WASF1-208ENST00000419252 740 ntTSL 312.88□□□□□ -0.353e-7■■■■□ 25.2
NCBP2P52298 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.363e-7■■■■□ 25.2
NCBP2P52298 WASF1-203ENST00000368938 678 ntTSL 411.5□□□□□ -0.573e-7■■■■□ 25.2
NCBP2P52298 WAS-202ENST00000450772 933 ntTSL 311.25□□□□□ -0.613e-7■■■■□ 25.2
NCBP2P52298 L3MBTL4-201ENST00000317931 3560 ntTSL 5 BASIC11.2□□□□□ -0.623e-7■■■■□ 25.2
NCBP2P52298 TP53I3-206ENST00000470636 317 ntTSL 310.76□□□□□ -0.693e-7■■■■□ 25.2
NCBP2P52298 CCND1-201ENST00000227507 4307 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.73e-7■■■■□ 25.2
NCBP2P52298 PLEC-206ENST00000357649 14689 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.713e-7■■■■□ 25.2
NCBP2P52298 PCSK6-203ENST00000557794 1196 ntTSL 510.54□□□□□ -0.723e-7■■■■□ 25.2
NCBP2P52298 WASF1-204ENST00000392586 2815 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.753e-7■■■■□ 25.2
NCBP2P52298 L3MBTL4-206ENST00000581231 568 ntTSL 510.15□□□□□ -0.783e-7■■■■□ 25.2
NCBP2P52298 L3MBTL4-202ENST00000400104 4534 ntTSL 1 (best) BASIC9.5□□□□□ -0.893e-7■■■■□ 25.2
NCBP2P52298 PPP1R12B-211ENST00000476364 1681 ntTSL 221.86■■□□□ 1.095e-7■■■■□ 25.1
NCBP2P52298 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.84■■□□□ 1.095e-7■■■■□ 25.1
NCBP2P52298 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.84■■□□□ 1.095e-7■■■■□ 25.1
NCBP2P52298 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.73■□□□□ 0.915e-7■■■■□ 25.1
NCBP2P52298 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.97■□□□□ 0.795e-7■■■■□ 25.1
NCBP2P52298 C15orf41-215ENST00000570265 1265 ntTSL 218.25■□□□□ 0.515e-7■■■■□ 25.1
NCBP2P52298 C15orf41-213ENST00000567573 665 ntTSL 517.92■□□□□ 0.465e-7■■■■□ 25.1
NCBP2P52298 KCTD9-207ENST00000521458 541 ntTSL 217.54■□□□□ 0.41e-7■■■■□ 25.1
NCBP2P52298 KCTD9-205ENST00000519665 2128 ntTSL 517.33■□□□□ 0.371e-7■■■■□ 25.1
NCBP2P52298 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.3■□□□□ 0.365e-7■■■■□ 25.1
NCBP2P52298 KCTD9-204ENST00000518997 679 ntTSL 317.05■□□□□ 0.321e-7■■■■□ 25.1
NCBP2P52298 KCTD9-208ENST00000522493 530 ntTSL 417.05■□□□□ 0.321e-7■■■■□ 25.1
NCBP2P52298 KCTD9-203ENST00000518067 849 ntTSL 516.72■□□□□ 0.271e-7■■■■□ 25.1
NCBP2P52298 KCTD9-209ENST00000523140 840 ntTSL 315.73■□□□□ 0.111e-7■■■■□ 25.1
NCBP2P52298 C15orf41-206ENST00000564586 524 ntTSL 415.3■□□□□ 0.045e-7■■■■□ 25.1
NCBP2P52298 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.045e-7■■■■□ 25.1
NCBP2P52298 KCTD9-211ENST00000524217 400 ntTSL 213.7□□□□□ -0.221e-7■■■■□ 25.1
NCBP2P52298 TMA16-207ENST00000511562 554 ntTSL 213.34□□□□□ -0.275e-7■■■■□ 25.1
NCBP2P52298 TMA16-205ENST00000508652 1195 ntTSL 213.34□□□□□ -0.275e-7■■■■□ 25.1
NCBP2P52298 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.321e-7■■■■□ 25.1
NCBP2P52298 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.365e-7■■■■□ 25.1
NCBP2P52298 TMEM198B-202ENST00000478241 2924 ntTSL 2 BASIC10.97□□□□□ -0.655e-7■■■■□ 25.1
NCBP2P52298 RBM25-202ENST00000525161 541 ntTSL 410.75□□□□□ -0.692e-25■■■■□ 25.1
NCBP2P52298 TMA16-208ENST00000513134 747 ntTSL 3 BASIC10.66□□□□□ -0.75e-7■■■■□ 25.1
NCBP2P52298 TMA16-204ENST00000508268 608 ntTSL 2 BASIC10.52□□□□□ -0.735e-7■■■■□ 25.1
NCBP2P52298 ZCCHC8-210ENST00000633063 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.795e-7■■■■□ 25.1
NCBP2P52298 MAT2A-203ENST00000465151 583 ntTSL 29.45□□□□□ -0.95e-7■■■■□ 25.1
NCBP2P52298 MAT2A-201ENST00000306434 2819 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.975e-7■■■■□ 25.1
NCBP2P52298 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC8.9□□□□□ -0.985e-7■■■■□ 25.1
NCBP2P52298 ATXN3-205ENST00000454964 598 ntTSL 28.85□□□□□ -0.995e-7■■■■□ 25.1
NCBP2P52298 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC8.67□□□□□ -1.025e-7■■■■□ 25.1
NCBP2P52298 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC8.34□□□□□ -1.085e-7■■■■□ 25.1
NCBP2P52298 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC7.89□□□□□ -1.155e-7■■■■□ 25.1
NCBP2P52298 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.165e-7■■■■□ 25.1
NCBP2P52298 ATXN3-235ENST00000556082 660 ntTSL 1 (best)7.81□□□□□ -1.165e-7■■■■□ 25.1
NCBP2P52298 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.94□□□□□ -1.35e-7■■■■□ 25.1
NCBP2P52298 ATXN3-221ENST00000553498 911 ntTSL 1 (best)6.89□□□□□ -1.315e-7■■■■□ 25.1
NCBP2P52298 MAT2A-204ENST00000469221 691 ntTSL 26.49□□□□□ -1.378e-8■■■■□ 25.1
NCBP2P52298 ATXN3-219ENST00000553488 1065 ntTSL 1 (best)6.4□□□□□ -1.385e-7■■■■□ 25.1
NCBP2P52298 ATXN3-236ENST00000556220 692 ntTSL 1 (best)5.9□□□□□ -1.465e-7■■■■□ 25.1
NCBP2P52298 ATXN3-224ENST00000554040 592 ntTSL 1 (best)5.9□□□□□ -1.465e-7■■■■□ 25.1
NCBP2P52298 ATXN3-230ENST00000554673 981 ntTSL 55.41□□□□□ -1.545e-7■■■■□ 25.1
NCBP2P52298 TMA16-206ENST00000509657 933 ntTSL 55.07□□□□□ -1.65e-7■■■■□ 25.1
NCBP2P52298 ATXN3-244ENST00000556898 990 ntTSL 1 (best)4.94□□□□□ -1.625e-7■■■■□ 25.1
NCBP2P52298 ATXN3-210ENST00000507965 708 ntTSL 24.93□□□□□ -1.625e-7■■■■□ 25.1
NCBP2P52298 ATXN3-245ENST00000556958 769 ntTSL 1 (best)4.8□□□□□ -1.645e-7■■■■□ 25.1
NCBP2P52298 ATXN3-223ENST00000553686 869 ntTSL 1 (best)4.8□□□□□ -1.645e-7■■■■□ 25.1
NCBP2P52298 ATXN3-202ENST00000359366 2584 ntTSL 1 (best)4.8□□□□□ -1.645e-7■■■■□ 25.1
NCBP2P52298 ATXN3-226ENST00000554350 943 ntTSL 1 (best)4.79□□□□□ -1.645e-7■■■■□ 25.1
NCBP2P52298 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.61□□□□□ -1.675e-7■■■■□ 25.1
NCBP2P52298 ATXN3-212ENST00000515746 619 ntTSL 54.61□□□□□ -1.675e-7■■■■□ 25.1
NCBP2P52298 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.32□□□□□ -1.725e-7■■■■□ 25.1
NCBP2P52298 ATXN3-243ENST00000556671 921 ntTSL 1 (best)4.29□□□□□ -1.725e-7■■■■□ 25.1
NCBP2P52298 ATXN3-231ENST00000554994 922 ntTSL 1 (best)4.29□□□□□ -1.725e-7■■■■□ 25.1
NCBP2P52298 ATXN3-220ENST00000553491 857 ntTSL 1 (best)4.29□□□□□ -1.725e-7■■■■□ 25.1
NCBP2P52298 ATXN3-222ENST00000553570 757 ntTSL 1 (best)4.29□□□□□ -1.725e-7■■■■□ 25.1
NCBP2P52298 ATXN3-237ENST00000556274 913 ntTSL 1 (best)4.29□□□□□ -1.725e-7■■■■□ 25.1
NCBP2P52298 ATXN3-238ENST00000556288 901 ntTSL 1 (best)4.29□□□□□ -1.725e-7■■■■□ 25.1
NCBP2P52298 ATXN3-246ENST00000557030 807 ntTSL 1 (best)4.21□□□□□ -1.745e-7■■■■□ 25.1
NCBP2P52298 ATXN3-209ENST00000506466 637 ntTSL 34.21□□□□□ -1.745e-7■■■■□ 25.1
NCBP2P52298 ATXN3-228ENST00000554592 1010 ntTSL 1 (best)4.18□□□□□ -1.745e-7■■■■□ 25.1
NCBP2P52298 ATXN3-232ENST00000555381 803 ntTSL 1 (best)4.18□□□□□ -1.745e-7■■■■□ 25.1
NCBP2P52298 ATXN3-229ENST00000554672 759 ntTSL 1 (best)4.18□□□□□ -1.745e-7■■■■□ 25.1
NCBP2P52298 ATXN3-233ENST00000555816 760 ntTSL 1 (best)4.18□□□□□ -1.745e-7■■■■□ 25.1
NCBP2P52298 ATXN3-247ENST00000557311 562 ntTSL 1 (best)4.18□□□□□ -1.745e-7■■■■□ 25.1
NCBP2P52298 ATXN3-239ENST00000556315 924 ntTSL 1 (best)4.18□□□□□ -1.745e-7■■■■□ 25.1
NCBP2P52298 ATXN3-241ENST00000556374 1083 ntTSL 1 (best)4.08□□□□□ -1.765e-7■■■■□ 25.1
NCBP2P52298 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.96□□□□□ -1.775e-7■■■■□ 25.1
NCBP2P52298 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.93□□□□□ -1.785e-7■■■■□ 25.1
NCBP2P52298 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.845e-7■■■■□ 25.1
NCBP2P52298 ATXN3-240ENST00000556339 525 ntTSL 1 (best)3.48□□□□□ -1.855e-7■■■■□ 25.1
NCBP2P52298 ATXN3-227ENST00000554491 1064 ntTSL 1 (best)3.44□□□□□ -1.865e-7■■■■□ 25.1
NCBP2P52298 ATXN3-242ENST00000556644 372 ntTSL 1 (best)3.44□□□□□ -1.865e-7■■■■□ 25.1
NCBP2P52298 ATXN3-218ENST00000553309 1022 ntTSL 1 (best)3.44□□□□□ -1.865e-7■■■■□ 25.1
NCBP2P52298 ATXN3-225ENST00000554214 771 ntTSL 1 (best)3.09□□□□□ -1.915e-7■■■■□ 25.1
NCBP2P52298 ATXN3-234ENST00000555958 857 ntTSL 1 (best)3□□□□□ -1.935e-7■■■■□ 25.1
NCBP2P52298 ATXN3-217ENST00000553287 726 ntTSL 1 (best)3□□□□□ -1.935e-7■■■■□ 25.1
NCBP2P52298 ATXN3-211ENST00000511362 591 ntTSL 32.09□□□□□ -2.075e-7■■■■□ 25.1
Retrieved 100 of 18,329 protein–RNA pairs in 418.4 ms