RNA–Protein interactions for RNA: ENST00000478241.6

TMEM198B-202, Transcript of transmembrane protein 198B (pseudogene), humanhuman

TSL 2 BASIC

Gene TMEM198B, Length 2,924 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM198B-202ENST00000478241 NISCHQ9Y2I1 1504 aa25.66■■□□□ 1.7
TMEM198B-202ENST00000478241 CCDC180Q9P1Z9 1646 aa22.18■■□□□ 1.14
TMEM198B-202ENST00000478241 ZCCHC6Q5VYS8 1495 aaKnown RBP21.58■■□□□ 1.05
TMEM198B-202ENST00000478241 DCAF8L2P0C7V8 631 aa21.4■■□□□ 1.02
TMEM198B-202ENST00000478241 SHROOM4Q9ULL8 1493 aa21.35■■□□□ 1.01
TMEM198B-202ENST00000478241 DCAF1Q9Y4B6 1507 aa21.08■□□□□ 0.97
TMEM198B-202ENST00000478241 ABCC9O60706 1549 aa21.04■□□□□ 0.96
TMEM198B-202ENST00000478241 MYO15BQ96JP2 1530 aa20.73■□□□□ 0.91
TMEM198B-202ENST00000478241 NACADO15069 1562 aa20.64■□□□□ 0.89
TMEM198B-202ENST00000478241 SCRIBQ14160 1630 aa20.63■□□□□ 0.89
TMEM198B-202ENST00000478241 SUPT5HO00267 1087 aaKnown RBP20.61■□□□□ 0.89
TMEM198B-202ENST00000478241 RB1CC1Q8TDY2 1594 aa20.45■□□□□ 0.86
TMEM198B-202ENST00000478241 UNC13AQ9UPW8 1703 aa20.1■□□□□ 0.81
TMEM198B-202ENST00000478241 RSF1Q96T23 1441 aaPredicted RBP20.03■□□□□ 0.8
TMEM198B-202ENST00000478241 CECR2Q9BXF3 1484 aa20.03■□□□□ 0.8
TMEM198B-202ENST00000478241 PABPN1Q86U42 306 aaKnown RBP eCLIP19.95■□□□□ 0.78
TMEM198B-202ENST00000478241 MROH2BQ7Z745 1585 aa19.9■□□□□ 0.78
TMEM198B-202ENST00000478241 BICRAQ9NZM4 1560 aa19.88■□□□□ 0.77
TMEM198B-202ENST00000478241 BAZ1AQ9NRL2 1556 aaPredicted RBP19.77■□□□□ 0.76
TMEM198B-202ENST00000478241 WIZO95785 1651 aa19.77■□□□□ 0.76
TMEM198B-202ENST00000478241 CHIC1Q5VXU3 224 aa19.72■□□□□ 0.75
TMEM198B-202ENST00000478241 SMARCA4P51532 1647 aa19.69■□□□□ 0.74
TMEM198B-202ENST00000478241 HRCP23327 699 aa19.58■□□□□ 0.72
TMEM198B-202ENST00000478241 TOP2AP11388 1531 aaKnown RBP19.47■□□□□ 0.71
TMEM198B-202ENST00000478241 PEG3Q9GZU2 1588 aa19.35■□□□□ 0.69
TMEM198B-202ENST00000478241 PPARGC1BQ86YN6 1023 aaKnown RBP19.35■□□□□ 0.69
TMEM198B-202ENST00000478241 CCDC88BA6NC98 1476 aa19.34■□□□□ 0.69
TMEM198B-202ENST00000478241 SMARCA2P51531 1590 aa19.33■□□□□ 0.69
TMEM198B-202ENST00000478241 ATAD2BQ9ULI0 1458 aa19.33■□□□□ 0.68
TMEM198B-202ENST00000478241 TRIM41Q8WV44 630 aa19.27■□□□□ 0.68
TMEM198B-202ENST00000478241 EIF4G1Q04637 1599 aaKnown RBP19.27■□□□□ 0.68
TMEM198B-202ENST00000478241 PCGF6Q9BYE7 350 aa19.26■□□□□ 0.67
TMEM198B-202ENST00000478241 BAZ1BQ9UIG0 1483 aaKnown RBP19.25■□□□□ 0.67
TMEM198B-202ENST00000478241 PELP1Q8IZL8 1130 aaKnown RBP19.18■□□□□ 0.66
TMEM198B-202ENST00000478241 LOC105371045A0A1W2PR82 267 aa19.1■□□□□ 0.65
TMEM198B-202ENST00000478241 ABCC8Q09428 1581 aa19.08■□□□□ 0.64
TMEM198B-202ENST00000478241 NCAPD3P42695 1498 aa19.07■□□□□ 0.64
TMEM198B-202ENST00000478241 FAM9AQ8IZU1 332 aaPredicted RBP19.07■□□□□ 0.64
TMEM198B-202ENST00000478241 HMGXB3Q12766 1538 aa19.04■□□□□ 0.64
TMEM198B-202ENST00000478241 CC2D2AQ9P2K1 1620 aa18.96■□□□□ 0.63
TMEM198B-202ENST00000478241 EHMT2Q96KQ7 1210 aa18.91■□□□□ 0.62
TMEM198B-202ENST00000478241 WRNQ14191 1432 aaPredicted RBP eCLIP18.85■□□□□ 0.61
TMEM198B-202ENST00000478241 SYNJ1O43426 1573 aa18.79■□□□□ 0.6
TMEM198B-202ENST00000478241 MYT1Q01538 1121 aa18.76■□□□□ 0.59
TMEM198B-202ENST00000478241 SOGA1O94964 1423 aa18.76■□□□□ 0.59
TMEM198B-202ENST00000478241 CFTRP13569 1480 aa18.73■□□□□ 0.59
TMEM198B-202ENST00000478241 RUSC2Q8N2Y8 1516 aa18.69■□□□□ 0.58
TMEM198B-202ENST00000478241 CADPSQ9ULU8 1353 aa18.65■□□□□ 0.58
TMEM198B-202ENST00000478241 SCAF1Q9H7N4 1312 aaKnown RBP18.64■□□□□ 0.58
TMEM198B-202ENST00000478241 TOP2BQ02880 1626 aa18.62■□□□□ 0.57
TMEM198B-202ENST00000478241 DNAJC5BQ9UF47 199 aa18.6■□□□□ 0.57
TMEM198B-202ENST00000478241 PRDM2Q13029 1718 aa18.59■□□□□ 0.57
TMEM198B-202ENST00000478241 CUX1P39880 1505 aa18.58■□□□□ 0.57
TMEM198B-202ENST00000478241 CSRNP3Q8WYN3 585 aa18.58■□□□□ 0.57
TMEM198B-202ENST00000478241 EEA1Q15075 1411 aa18.58■□□□□ 0.56
TMEM198B-202ENST00000478241 BIVM-ERCC5R4GMW8 1640 aa18.57■□□□□ 0.56
TMEM198B-202ENST00000478241 NESP48681 1621 aa18.54■□□□□ 0.56
TMEM198B-202ENST00000478241 TRIM26Q12899 539 aaPredicted RBP18.49■□□□□ 0.55
TMEM198B-202ENST00000478241 FANCD2Q9BXW9 1451 aa18.48■□□□□ 0.55
TMEM198B-202ENST00000478241 UBTFP17480 764 aaKnown RBP18.45■□□□□ 0.54
TMEM198B-202ENST00000478241 GOLGA3Q08378 1498 aa18.42■□□□□ 0.54
TMEM198B-202ENST00000478241 LAMC3Q9Y6N6 1575 aa18.38■□□□□ 0.53
TMEM198B-202ENST00000478241 CEP164Q9UPV0 1460 aa18.38■□□□□ 0.53
TMEM198B-202ENST00000478241 TNIKQ9UKE5 1360 aa18.38■□□□□ 0.53
TMEM198B-202ENST00000478241 CEP162Q5TB80 1403 aa18.37■□□□□ 0.53
TMEM198B-202ENST00000478241 KIF21BO75037 1637 aa18.37■□□□□ 0.53
TMEM198B-202ENST00000478241 FGD5Q6ZNL6 1462 aa18.35■□□□□ 0.53
TMEM198B-202ENST00000478241 RAPGEF2Q9Y4G8 1499 aa18.34■□□□□ 0.53
TMEM198B-202ENST00000478241 KIF27Q86VH2 1401 aa18.33■□□□□ 0.52
TMEM198B-202ENST00000478241 CUX2O14529 1486 aa18.3■□□□□ 0.52
TMEM198B-202ENST00000478241 DNMBPQ6XZF7 1577 aa18.29■□□□□ 0.52
TMEM198B-202ENST00000478241 TOPBP1Q92547 1522 aa18.29■□□□□ 0.52
TMEM198B-202ENST00000478241 ZEB1P37275 1124 aaPredicted RBP18.29■□□□□ 0.52
TMEM198B-202ENST00000478241 PDS5BQ9NTI5 1447 aa18.28■□□□□ 0.52
TMEM198B-202ENST00000478241 RANGAP1P46060 587 aaPredicted RBP18.25■□□□□ 0.51
TMEM198B-202ENST00000478241 KIF21AQ7Z4S6 1674 aa18.25■□□□□ 0.51
TMEM198B-202ENST00000478241 PRXQ9BXM0 1461 aa18.24■□□□□ 0.51
TMEM198B-202ENST00000478241 URB2Q14146 1524 aaKnown RBP18.24■□□□□ 0.51
TMEM198B-202ENST00000478241 RAD54L2Q9Y4B4 1467 aa18.24■□□□□ 0.51
TMEM198B-202ENST00000478241 POLA1P09884 1462 aaPredicted RBP18.23■□□□□ 0.51
TMEM198B-202ENST00000478241 ERICH3Q5RHP9 1530 aa18.19■□□□□ 0.5
TMEM198B-202ENST00000478241 CLIP1P30622 1438 aa18.17■□□□□ 0.5
TMEM198B-202ENST00000478241 IGF1RP08069 1367 aa18.17■□□□□ 0.5
TMEM198B-202ENST00000478241 ABCA10Q8WWZ4 1543 aa18.13■□□□□ 0.49
TMEM198B-202ENST00000478241 TTBK1Q5TCY1 1321 aaPredicted RBP18.13■□□□□ 0.49
TMEM198B-202ENST00000478241 NEUROD1Q13562 356 aa18.12■□□□□ 0.49
TMEM198B-202ENST00000478241 ACIN1Q9UKV3 1341 aaKnown RBP18.1■□□□□ 0.49
TMEM198B-202ENST00000478241 CARMIL1Q5VZK9 1371 aa18.09■□□□□ 0.49
TMEM198B-202ENST00000478241 TDRD9Q8NDG6 1382 aaKnown RBP18.06■□□□□ 0.48
TMEM198B-202ENST00000478241 WDR97A6NE52 1622 aa18.04■□□□□ 0.48
TMEM198B-202ENST00000478241 MRC2Q9UBG0 1479 aa18.04■□□□□ 0.48
TMEM198B-202ENST00000478241 GTF3C3Q9Y5Q9 886 aa18.03■□□□□ 0.48
TMEM198B-202ENST00000478241 VPS8Q8N3P4 1428 aa18.01■□□□□ 0.47
TMEM198B-202ENST00000478241 ERCC6Q03468 1493 aa17.98■□□□□ 0.47
TMEM198B-202ENST00000478241 TARBP1Q13395 1621 aaKnown RBP17.97■□□□□ 0.47
TMEM198B-202ENST00000478241 ABCA5Q8WWZ7 1642 aa17.97■□□□□ 0.47
TMEM198B-202ENST00000478241 GAPVD1Q14C86 1478 aa17.97■□□□□ 0.47
TMEM198B-202ENST00000478241 ARAP1Q96P48 1450 aa17.97■□□□□ 0.47
TMEM198B-202ENST00000478241 CUL7Q14999 1698 aa17.94■□□□□ 0.46
TMEM198B-202ENST00000478241 ARHGAP35Q9NRY4 1499 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms