RNA–Protein interactions for RNA: ENST00000502250.5

ATXN3-206, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-206ENST00000502250 AEBP2Q6ZN18 517 aaPredicted RBP30.65■■■□□ 2.5
ATXN3-206ENST00000502250 CHIC1Q5VXU3 224 aa30.17■■■□□ 2.42
ATXN3-206ENST00000502250 PHF23Q9BUL5 403 aaPredicted RBP26.5■■□□□ 1.83
ATXN3-206ENST00000502250 SENP3Q9H4L4 574 aaPredicted RBP26.06■■□□□ 1.76
ATXN3-206ENST00000502250 PLPPR3Q6T4P5 718 aa24.59■■□□□ 1.53
ATXN3-206ENST00000502250 FOXD1Q16676 465 aa24.09■■□□□ 1.45
ATXN3-206ENST00000502250 PPP6R1Q9UPN7 881 aa23.29■■□□□ 1.32
ATXN3-206ENST00000502250 ADRA2BP18089 450 aa23.27■■□□□ 1.32
ATXN3-206ENST00000502250 PIAS4Q8N2W9 510 aaPredicted RBP22.76■■□□□ 1.23
ATXN3-206ENST00000502250 MSH5O43196 834 aa22.23■■□□□ 1.15
ATXN3-206ENST00000502250 PPP4R3CPQ6ZMV5 832 aa21.64■■□□□ 1.05
ATXN3-206ENST00000502250 SCAF1Q9H7N4 1312 aaKnown RBP21.4■■□□□ 1.02
ATXN3-206ENST00000502250 KCNA4P22459 653 aa21.31■■□□□ 1
ATXN3-206ENST00000502250 NCBP3Q53F19 620 aaKnown RBP21.18■□□□□ 0.98
ATXN3-206ENST00000502250 MAPK8IP2Q13387 824 aaPredicted RBP21.04■□□□□ 0.96
ATXN3-206ENST00000502250 CNKSR2Q8WXI2 1034 aa21.04■□□□□ 0.96
ATXN3-206ENST00000502250 NPM3O75607 178 aaKnown RBP20.82■□□□□ 0.92
ATXN3-206ENST00000502250 DMRT2Q9Y5R5 561 aa20.82■□□□□ 0.92
ATXN3-206ENST00000502250 RNF216Q9NWF9 866 aaPredicted RBP20.6■□□□□ 0.89
ATXN3-206ENST00000502250 HOXD11P31277 338 aaPredicted RBP20.48■□□□□ 0.87
ATXN3-206ENST00000502250 DNAJC5BQ9UF47 199 aa20.36■□□□□ 0.85
ATXN3-206ENST00000502250 SLC4A1APQ9BWU0 796 aaKnown RBP20.35■□□□□ 0.85
ATXN3-206ENST00000502250 EHMT2Q96KQ7 1210 aa19.9■□□□□ 0.78
ATXN3-206ENST00000502250 POTEDQ86YR6 584 aa19.85■□□□□ 0.77
ATXN3-206ENST00000502250 DCAF8L1A6NGE4 600 aa19.79■□□□□ 0.76
ATXN3-206ENST00000502250 CSRNP3Q8WYN3 585 aa19.66■□□□□ 0.74
ATXN3-206ENST00000502250 FOXD4L1Q9NU39 408 aa19.63■□□□□ 0.73
ATXN3-206ENST00000502250 SLC4A2P04920 1241 aa19.62■□□□□ 0.73
ATXN3-206ENST00000502250 ZBTB22O15209 634 aa19.61■□□□□ 0.73
ATXN3-206ENST00000502250 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.44■□□□□ 0.7
ATXN3-206ENST00000502250 MYCNP04198 464 aaPredicted RBP19.27■□□□□ 0.68
ATXN3-206ENST00000502250 U3KPZ7 1027 aaPredicted RBP19.17■□□□□ 0.66
ATXN3-206ENST00000502250 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.07■□□□□ 0.64
ATXN3-206ENST00000502250 HNRNPUL2Q1KMD3 747 aaKnown RBP19.07■□□□□ 0.64
ATXN3-206ENST00000502250 RNF39Q9H2S5 420 aa19.04■□□□□ 0.64
ATXN3-206ENST00000502250 ATXN8OSP0DMR3 200 aa18.99■□□□□ 0.63
ATXN3-206ENST00000502250 SAMD1Q6SPF0 538 aaPredicted RBP18.99■□□□□ 0.63
ATXN3-206ENST00000502250 C1QBPQ07021 282 aaKnown RBP18.85■□□□□ 0.61
ATXN3-206ENST00000502250 APLP2Q06481 763 aa18.84■□□□□ 0.61
ATXN3-206ENST00000502250 ATF5Q9Y2D1 282 aaPredicted RBP18.65■□□□□ 0.58
ATXN3-206ENST00000502250 SPINK5Q9NQ38 1064 aaPredicted RBP18.53■□□□□ 0.56
ATXN3-206ENST00000502250 ZNF219Q9P2Y4 722 aaPredicted RBP18.51■□□□□ 0.55
ATXN3-206ENST00000502250 CAPN15O75808 1086 aa18.46■□□□□ 0.55
ATXN3-206ENST00000502250 TRHP20396 242 aaPredicted RBP18.39■□□□□ 0.53
ATXN3-206ENST00000502250 CACNB1Q02641 598 aaPredicted RBP18.36■□□□□ 0.53
ATXN3-206ENST00000502250 DSG3P32926 999 aa18.16■□□□□ 0.5
ATXN3-206ENST00000502250 POLA2Q14181 598 aa18.16■□□□□ 0.5
ATXN3-206ENST00000502250 ABCB7O75027 752 aa18.08■□□□□ 0.48
ATXN3-206ENST00000502250 ZBTB12Q9Y330 459 aaPredicted RBP18■□□□□ 0.47
ATXN3-206ENST00000502250 FBLN2P98095 1184 aa17.94■□□□□ 0.46
ATXN3-206ENST00000502250 MKRN4PQ13434 485 aaPredicted RBP17.89■□□□□ 0.45
ATXN3-206ENST00000502250 FKBP8Q14318 412 aa17.74■□□□□ 0.43
ATXN3-206ENST00000502250 SPDYE4A6NLX3 237 aa17.59■□□□□ 0.41
ATXN3-206ENST00000502250 OSCARQ8IYS5 282 aa17.55■□□□□ 0.4
ATXN3-206ENST00000502250 SPDYE2BA6NHP3 402 aa17.5■□□□□ 0.39
ATXN3-206ENST00000502250 SPDYE6P0CI01 402 aa17.5■□□□□ 0.39
ATXN3-206ENST00000502250 SPDYE2Q495Y8 402 aa17.5■□□□□ 0.39
ATXN3-206ENST00000502250 PROM2Q8N271 834 aa17.41■□□□□ 0.38
ATXN3-206ENST00000502250 ZNF692Q9BU19 519 aaPredicted RBP17.38■□□□□ 0.37
ATXN3-206ENST00000502250 SSUH2Q9Y2M2 353 aa17.38■□□□□ 0.37
ATXN3-206ENST00000502250 RBM42Q9BTD8 480 aaKnown RBP17.35■□□□□ 0.37
ATXN3-206ENST00000502250 PABPN1Q86U42 306 aaKnown RBP eCLIP17.16■□□□□ 0.34
ATXN3-206ENST00000502250 AKT1S1Q96B36 256 aa17.16■□□□□ 0.34
ATXN3-206ENST00000502250 FBXO3Q9UK99 471 aa17.15■□□□□ 0.34
ATXN3-206ENST00000502250 STAG3Q9UJ98 1225 aa16.99■□□□□ 0.31
ATXN3-206ENST00000502250 REM2Q8IYK8 340 aaPredicted RBP16.95■□□□□ 0.3
ATXN3-206ENST00000502250 SPDYE1Q8NFV5 336 aaPredicted RBP16.92■□□□□ 0.3
ATXN3-206ENST00000502250 VASPP50552 380 aaPredicted RBP16.88■□□□□ 0.29
ATXN3-206ENST00000502250 PITPNM1O00562 1244 aa16.75■□□□□ 0.27
ATXN3-206ENST00000502250 CLEC11AQ9Y240 323 aa16.73■□□□□ 0.27
ATXN3-206ENST00000502250 PRR29P0C7W0 189 aa16.66■□□□□ 0.26
ATXN3-206ENST00000502250 PLCD3Q8N3E9 789 aa16.63■□□□□ 0.25
ATXN3-206ENST00000502250 IFNLR1Q8IU57 520 aaPredicted RBP16.62■□□□□ 0.25
ATXN3-206ENST00000502250 MIER1Q8N108 512 aa16.62■□□□□ 0.25
ATXN3-206ENST00000502250 PLEKHG5O94827 1062 aa16.59■□□□□ 0.25
ATXN3-206ENST00000502250 AMER1Q5JTC6 1135 aaPredicted RBP16.55■□□□□ 0.24
ATXN3-206ENST00000502250 ZBTB47Q9UFB7 747 aaPredicted RBP16.53■□□□□ 0.24
ATXN3-206ENST00000502250 CHRDL2Q6WN34 429 aa16.51■□□□□ 0.23
ATXN3-206ENST00000502250 CREBZFQ9NS37 354 aa16.5■□□□□ 0.23
ATXN3-206ENST00000502250 KLHL34Q8N239 644 aa16.48■□□□□ 0.23
ATXN3-206ENST00000502250 FXR2P51116 673 aaKnown RBP eCLIP16.43■□□□□ 0.22
ATXN3-206ENST00000502250 SPOCK2Q92563 424 aa16.43■□□□□ 0.22
ATXN3-206ENST00000502250 RTN4Q9NQC3 1192 aaKnown RBP16.42■□□□□ 0.22
ATXN3-206ENST00000502250 MNX1P50219 401 aaPredicted RBP16.37■□□□□ 0.21
ATXN3-206ENST00000502250 PIP4P2Q8N4L2 257 aa16.33■□□□□ 0.2
ATXN3-206ENST00000502250 PRKAR2AP13861 404 aaKnown RBP16.31■□□□□ 0.2
ATXN3-206ENST00000502250 CHADLQ6NUI6 762 aa16.3■□□□□ 0.2
ATXN3-206ENST00000502250 NPM1P06748 294 aaKnown RBP eCLIP16.27■□□□□ 0.2
ATXN3-206ENST00000502250 FARP1Q9Y4F1 1045 aaPredicted RBP16.25■□□□□ 0.19
ATXN3-206ENST00000502250 NUBP1P53384 320 aa16.23■□□□□ 0.19
ATXN3-206ENST00000502250 PKD2Q13563 968 aa16.15■□□□□ 0.18
ATXN3-206ENST00000502250 GSE1Q14687 1217 aa16.12■□□□□ 0.17
ATXN3-206ENST00000502250 FAM212AQ96EL1 285 aa16.11■□□□□ 0.17
ATXN3-206ENST00000502250 RASEFQ8IZ41 740 aa16.09■□□□□ 0.17
ATXN3-206ENST00000502250 CIZ1Q9ULV3 898 aaPredicted RBP16.08■□□□□ 0.16
ATXN3-206ENST00000502250 TRIM41Q8WV44 630 aa16.07■□□□□ 0.16
ATXN3-206ENST00000502250 DCAF8Q5TAQ9 597 aa16.03■□□□□ 0.16
ATXN3-206ENST00000502250 ECM2O94769 699 aaPredicted RBP15.99■□□□□ 0.15
ATXN3-206ENST00000502250 PAK3O75914 559 aaPredicted RBP15.93■□□□□ 0.14
ATXN3-206ENST00000502250 CHRM1P11229 460 aaPredicted RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms