RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 AEBP2Q6ZN18 517 aaPredicted RBP21.16■□□□□ 0.98
ATXN3-229ENST00000554672 CHIC1Q5VXU3 224 aa20.18■□□□□ 0.82
ATXN3-229ENST00000554672 SENP3Q9H4L4 574 aaPredicted RBP17.9■□□□□ 0.46
ATXN3-229ENST00000554672 PHF23Q9BUL5 403 aaPredicted RBP17.76■□□□□ 0.43
ATXN3-229ENST00000554672 FOXD1Q16676 465 aa16.75■□□□□ 0.27
ATXN3-229ENST00000554672 PLPPR3Q6T4P5 718 aa16.14■□□□□ 0.17
ATXN3-229ENST00000554672 PPP6R1Q9UPN7 881 aa15.83■□□□□ 0.12
ATXN3-229ENST00000554672 ADRA2BP18089 450 aa15.75■□□□□ 0.11
ATXN3-229ENST00000554672 PIAS4Q8N2W9 510 aaPredicted RBP15.62■□□□□ 0.09
ATXN3-229ENST00000554672 MSH5O43196 834 aa15.51■□□□□ 0.07
ATXN3-229ENST00000554672 POTEDQ86YR6 584 aa15.15■□□□□ 0.02
ATXN3-229ENST00000554672 MAPK8IP2Q13387 824 aaPredicted RBP14.45□□□□□ -0.1
ATXN3-229ENST00000554672 SCAF1Q9H7N4 1312 aaKnown RBP14.3□□□□□ -0.12
ATXN3-229ENST00000554672 DMRT2Q9Y5R5 561 aa14.26□□□□□ -0.13
ATXN3-229ENST00000554672 PPP4R3CPQ6ZMV5 832 aa14.21□□□□□ -0.13
ATXN3-229ENST00000554672 CNKSR2Q8WXI2 1034 aa13.88□□□□□ -0.19
ATXN3-229ENST00000554672 HOXD11P31277 338 aaPredicted RBP13.81□□□□□ -0.2
ATXN3-229ENST00000554672 RNF216Q9NWF9 866 aaPredicted RBP13.72□□□□□ -0.21
ATXN3-229ENST00000554672 NCBP3Q53F19 620 aaKnown RBP13.64□□□□□ -0.23
ATXN3-229ENST00000554672 DCAF8L1A6NGE4 600 aa13.61□□□□□ -0.23
ATXN3-229ENST00000554672 NPM3O75607 178 aaKnown RBP13.52□□□□□ -0.25
ATXN3-229ENST00000554672 KCNA4P22459 653 aa13.43□□□□□ -0.26
ATXN3-229ENST00000554672 RNF39Q9H2S5 420 aa13.32□□□□□ -0.28
ATXN3-229ENST00000554672 DNAJC5BQ9UF47 199 aa13.26□□□□□ -0.29
ATXN3-229ENST00000554672 CACNB1Q02641 598 aaPredicted RBP13.24□□□□□ -0.29
ATXN3-229ENST00000554672 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.1□□□□□ -0.31
ATXN3-229ENST00000554672 C1QBPQ07021 282 aaKnown RBP13.09□□□□□ -0.31
ATXN3-229ENST00000554672 SLC4A2P04920 1241 aa12.92□□□□□ -0.34
ATXN3-229ENST00000554672 U3KPZ7 1027 aaPredicted RBP12.9□□□□□ -0.34
ATXN3-229ENST00000554672 SPINK5Q9NQ38 1064 aaPredicted RBP12.69□□□□□ -0.38
ATXN3-229ENST00000554672 SLC4A1APQ9BWU0 796 aaKnown RBP12.65□□□□□ -0.38
ATXN3-229ENST00000554672 CAPN15O75808 1086 aa12.58□□□□□ -0.4
ATXN3-229ENST00000554672 DSG3P32926 999 aa12.53□□□□□ -0.4
ATXN3-229ENST00000554672 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.48□□□□□ -0.41
ATXN3-229ENST00000554672 HNRNPUL2Q1KMD3 747 aaKnown RBP12.48□□□□□ -0.41
ATXN3-229ENST00000554672 MYCNP04198 464 aaPredicted RBP12.45□□□□□ -0.42
ATXN3-229ENST00000554672 SAMD1Q6SPF0 538 aaPredicted RBP12.44□□□□□ -0.42
ATXN3-229ENST00000554672 TRHP20396 242 aaPredicted RBP12.43□□□□□ -0.42
ATXN3-229ENST00000554672 APLP2Q06481 763 aa12.42□□□□□ -0.42
ATXN3-229ENST00000554672 FOXD4L1Q9NU39 408 aa12.41□□□□□ -0.42
ATXN3-229ENST00000554672 ZBTB22O15209 634 aa12.39□□□□□ -0.43
ATXN3-229ENST00000554672 ZNF219Q9P2Y4 722 aaPredicted RBP12.37□□□□□ -0.43
ATXN3-229ENST00000554672 ABCB7O75027 752 aa12.34□□□□□ -0.43
ATXN3-229ENST00000554672 ATF5Q9Y2D1 282 aaPredicted RBP12.26□□□□□ -0.45
ATXN3-229ENST00000554672 NISCHQ9Y2I1 1504 aa12.16□□□□□ -0.46
ATXN3-229ENST00000554672 POLA2Q14181 598 aa12.16□□□□□ -0.46
ATXN3-229ENST00000554672 ATXN8OSP0DMR3 200 aa12.01□□□□□ -0.49
ATXN3-229ENST00000554672 CSRNP3Q8WYN3 585 aa11.94□□□□□ -0.5
ATXN3-229ENST00000554672 RBM42Q9BTD8 480 aaKnown RBP11.86□□□□□ -0.51
ATXN3-229ENST00000554672 POTEHQ6S545 545 aa11.83□□□□□ -0.52
ATXN3-229ENST00000554672 ZBTB12Q9Y330 459 aaPredicted RBP11.83□□□□□ -0.52
ATXN3-229ENST00000554672 EHMT2Q96KQ7 1210 aa11.8□□□□□ -0.52
ATXN3-229ENST00000554672 OSCARQ8IYS5 282 aa11.76□□□□□ -0.53
ATXN3-229ENST00000554672 MKRN4PQ13434 485 aaPredicted RBP11.69□□□□□ -0.54
ATXN3-229ENST00000554672 AKT1S1Q96B36 256 aa11.66□□□□□ -0.54
ATXN3-229ENST00000554672 FBLN2P98095 1184 aa11.63□□□□□ -0.55
ATXN3-229ENST00000554672 CHRDL2Q6WN34 429 aa11.6□□□□□ -0.55
ATXN3-229ENST00000554672 REM2Q8IYK8 340 aaPredicted RBP11.59□□□□□ -0.55
ATXN3-229ENST00000554672 SPDYE2BA6NHP3 402 aa11.53□□□□□ -0.56
ATXN3-229ENST00000554672 SPDYE6P0CI01 402 aa11.53□□□□□ -0.56
ATXN3-229ENST00000554672 SPDYE2Q495Y8 402 aa11.53□□□□□ -0.56
ATXN3-229ENST00000554672 PITPNM1O00562 1244 aa11.46□□□□□ -0.57
ATXN3-229ENST00000554672 SSUH2Q9Y2M2 353 aa11.44□□□□□ -0.58
ATXN3-229ENST00000554672 ZNF692Q9BU19 519 aaPredicted RBP11.43□□□□□ -0.58
ATXN3-229ENST00000554672 PIP4P2Q8N4L2 257 aa11.38□□□□□ -0.59
ATXN3-229ENST00000554672 FXR2P51116 673 aaKnown RBP eCLIP11.34□□□□□ -0.59
ATXN3-229ENST00000554672 PABPN1Q86U42 306 aaKnown RBP eCLIP11.29□□□□□ -0.6
ATXN3-229ENST00000554672 ABCC9O60706 1549 aa11.29□□□□□ -0.6
ATXN3-229ENST00000554672 SPDYE1Q8NFV5 336 aaPredicted RBP11.27□□□□□ -0.61
ATXN3-229ENST00000554672 CLEC11AQ9Y240 323 aa11.27□□□□□ -0.61
ATXN3-229ENST00000554672 PRKAR2AP13861 404 aaKnown RBP11.15□□□□□ -0.62
ATXN3-229ENST00000554672 SPDYE4A6NLX3 237 aa11.14□□□□□ -0.63
ATXN3-229ENST00000554672 PRR29P0C7W0 189 aa11.1□□□□□ -0.63
ATXN3-229ENST00000554672 HAX1O00165 279 aa11.09□□□□□ -0.63
ATXN3-229ENST00000554672 CHADLQ6NUI6 762 aa11.09□□□□□ -0.63
ATXN3-229ENST00000554672 EVX2Q03828 476 aa11.08□□□□□ -0.64
ATXN3-229ENST00000554672 SP7Q8TDD2 431 aaPredicted RBP11.05□□□□□ -0.64
ATXN3-229ENST00000554672 C19orf67A6NJJ6 358 aa10.96□□□□□ -0.65
ATXN3-229ENST00000554672 PROM2Q8N271 834 aa10.96□□□□□ -0.65
ATXN3-229ENST00000554672 STAG3Q9UJ98 1225 aa10.95□□□□□ -0.66
ATXN3-229ENST00000554672 CREBZFQ9NS37 354 aa10.92□□□□□ -0.66
ATXN3-229ENST00000554672 FARP1Q9Y4F1 1045 aaPredicted RBP10.92□□□□□ -0.66
ATXN3-229ENST00000554672 CCDC180Q9P1Z9 1646 aa10.9□□□□□ -0.66
ATXN3-229ENST00000554672 CD44P16070 742 aaKnown RBP10.79□□□□□ -0.68
ATXN3-229ENST00000554672 MNX1P50219 401 aaPredicted RBP10.78□□□□□ -0.68
ATXN3-229ENST00000554672 GABBR2O75899 941 aa10.77□□□□□ -0.69
ATXN3-229ENST00000554672 FKBP8Q14318 412 aa10.76□□□□□ -0.69
ATXN3-229ENST00000554672 ZRANB1Q9UGI0 708 aa10.67□□□□□ -0.7
ATXN3-229ENST00000554672 ZNF579Q8NAF0 562 aaKnown RBP10.65□□□□□ -0.7
ATXN3-229ENST00000554672 NPM1P06748 294 aaKnown RBP eCLIP10.63□□□□□ -0.71
ATXN3-229ENST00000554672 POTEIP0CG38 1075 aa10.6□□□□□ -0.71
ATXN3-229ENST00000554672 MIER1Q8N108 512 aa10.6□□□□□ -0.71
ATXN3-229ENST00000554672 RB1CC1Q8TDY2 1594 aa10.59□□□□□ -0.71
ATXN3-229ENST00000554672 PHF12Q96QT6 1004 aa10.57□□□□□ -0.72
ATXN3-229ENST00000554672 CLCN6P51797 869 aa10.56□□□□□ -0.72
ATXN3-229ENST00000554672 GALR2O43603 387 aaPredicted RBP10.53□□□□□ -0.72
ATXN3-229ENST00000554672 PAK3O75914 559 aaPredicted RBP10.53□□□□□ -0.72
ATXN3-229ENST00000554672 DCAF8L2P0C7V8 631 aa10.53□□□□□ -0.72
ATXN3-229ENST00000554672 PLCD3Q8N3E9 789 aa10.51□□□□□ -0.73
ATXN3-229ENST00000554672 TSPYL2Q9H2G4 693 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 256.1 ms