RNA–Protein interactions for RNA: ENST00000503767.5

ATXN3-207, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-207ENST00000503767 AEBP2Q6ZN18 517 aaPredicted RBP32.02■■■□□ 2.72
ATXN3-207ENST00000503767 CHIC1Q5VXU3 224 aa30.58■■■□□ 2.49
ATXN3-207ENST00000503767 SENP3Q9H4L4 574 aaPredicted RBP27.24■■□□□ 1.95
ATXN3-207ENST00000503767 PHF23Q9BUL5 403 aaPredicted RBP26.91■■□□□ 1.9
ATXN3-207ENST00000503767 FOXD1Q16676 465 aa25.37■■□□□ 1.65
ATXN3-207ENST00000503767 PLPPR3Q6T4P5 718 aa24.49■■□□□ 1.51
ATXN3-207ENST00000503767 PPP6R1Q9UPN7 881 aa23.89■■□□□ 1.42
ATXN3-207ENST00000503767 ADRA2BP18089 450 aa23.8■■□□□ 1.4
ATXN3-207ENST00000503767 PIAS4Q8N2W9 510 aaPredicted RBP23.72■■□□□ 1.39
ATXN3-207ENST00000503767 MSH5O43196 834 aa23.66■■□□□ 1.38
ATXN3-207ENST00000503767 POTEDQ86YR6 584 aa22.78■■□□□ 1.24
ATXN3-207ENST00000503767 MAPK8IP2Q13387 824 aaPredicted RBP21.8■■□□□ 1.08
ATXN3-207ENST00000503767 SCAF1Q9H7N4 1312 aaKnown RBP21.74■■□□□ 1.07
ATXN3-207ENST00000503767 DMRT2Q9Y5R5 561 aa21.66■■□□□ 1.06
ATXN3-207ENST00000503767 PPP4R3CPQ6ZMV5 832 aa21.5■■□□□ 1.03
ATXN3-207ENST00000503767 CNKSR2Q8WXI2 1034 aa21.04■□□□□ 0.96
ATXN3-207ENST00000503767 HOXD11P31277 338 aaPredicted RBP20.95■□□□□ 0.94
ATXN3-207ENST00000503767 RNF216Q9NWF9 866 aaPredicted RBP20.82■□□□□ 0.92
ATXN3-207ENST00000503767 NCBP3Q53F19 620 aaKnown RBP20.7■□□□□ 0.9
ATXN3-207ENST00000503767 DCAF8L1A6NGE4 600 aa20.64■□□□□ 0.89
ATXN3-207ENST00000503767 NPM3O75607 178 aaKnown RBP20.44■□□□□ 0.86
ATXN3-207ENST00000503767 RNF39Q9H2S5 420 aa20.24■□□□□ 0.83
ATXN3-207ENST00000503767 KCNA4P22459 653 aa20.22■□□□□ 0.83
ATXN3-207ENST00000503767 DNAJC5BQ9UF47 199 aa20.22■□□□□ 0.83
ATXN3-207ENST00000503767 CACNB1Q02641 598 aaPredicted RBP20.15■□□□□ 0.82
ATXN3-207ENST00000503767 C1QBPQ07021 282 aaKnown RBP19.94■□□□□ 0.78
ATXN3-207ENST00000503767 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.89■□□□□ 0.77
ATXN3-207ENST00000503767 U3KPZ7 1027 aaPredicted RBP19.54■□□□□ 0.72
ATXN3-207ENST00000503767 SLC4A2P04920 1241 aa19.5■□□□□ 0.71
ATXN3-207ENST00000503767 SPINK5Q9NQ38 1064 aaPredicted RBP19.19■□□□□ 0.66
ATXN3-207ENST00000503767 SLC4A1APQ9BWU0 796 aaKnown RBP19.1■□□□□ 0.65
ATXN3-207ENST00000503767 CAPN15O75808 1086 aa19.09■□□□□ 0.65
ATXN3-207ENST00000503767 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.01■□□□□ 0.63
ATXN3-207ENST00000503767 HNRNPUL2Q1KMD3 747 aaKnown RBP19.01■□□□□ 0.63
ATXN3-207ENST00000503767 DSG3P32926 999 aa19■□□□□ 0.63
ATXN3-207ENST00000503767 APLP2Q06481 763 aa18.97■□□□□ 0.63
ATXN3-207ENST00000503767 SAMD1Q6SPF0 538 aaPredicted RBP18.94■□□□□ 0.62
ATXN3-207ENST00000503767 MYCNP04198 464 aaPredicted RBP18.89■□□□□ 0.61
ATXN3-207ENST00000503767 ZNF219Q9P2Y4 722 aaPredicted RBP18.84■□□□□ 0.61
ATXN3-207ENST00000503767 TRHP20396 242 aaPredicted RBP18.83■□□□□ 0.61
ATXN3-207ENST00000503767 FOXD4L1Q9NU39 408 aa18.8■□□□□ 0.6
ATXN3-207ENST00000503767 ABCB7O75027 752 aa18.68■□□□□ 0.58
ATXN3-207ENST00000503767 ZBTB22O15209 634 aa18.62■□□□□ 0.57
ATXN3-207ENST00000503767 ATF5Q9Y2D1 282 aaPredicted RBP18.45■□□□□ 0.54
ATXN3-207ENST00000503767 POLA2Q14181 598 aa18.39■□□□□ 0.53
ATXN3-207ENST00000503767 ATXN8OSP0DMR3 200 aa18.23■□□□□ 0.51
ATXN3-207ENST00000503767 RBM42Q9BTD8 480 aaKnown RBP18.1■□□□□ 0.49
ATXN3-207ENST00000503767 ZBTB12Q9Y330 459 aaPredicted RBP18.05■□□□□ 0.48
ATXN3-207ENST00000503767 CSRNP3Q8WYN3 585 aa17.92■□□□□ 0.46
ATXN3-207ENST00000503767 POTEHQ6S545 545 aa17.88■□□□□ 0.45
ATXN3-207ENST00000503767 OSCARQ8IYS5 282 aa17.81■□□□□ 0.44
ATXN3-207ENST00000503767 AKT1S1Q96B36 256 aa17.74■□□□□ 0.43
ATXN3-207ENST00000503767 EHMT2Q96KQ7 1210 aa17.72■□□□□ 0.43
ATXN3-207ENST00000503767 FBLN2P98095 1184 aa17.67■□□□□ 0.42
ATXN3-207ENST00000503767 MKRN4PQ13434 485 aaPredicted RBP17.64■□□□□ 0.41
ATXN3-207ENST00000503767 CHRDL2Q6WN34 429 aa17.64■□□□□ 0.41
ATXN3-207ENST00000503767 REM2Q8IYK8 340 aaPredicted RBP17.57■□□□□ 0.4
ATXN3-207ENST00000503767 SPDYE2BA6NHP3 402 aa17.53■□□□□ 0.4
ATXN3-207ENST00000503767 SPDYE6P0CI01 402 aa17.53■□□□□ 0.4
ATXN3-207ENST00000503767 SPDYE2Q495Y8 402 aa17.53■□□□□ 0.4
ATXN3-207ENST00000503767 PITPNM1O00562 1244 aa17.38■□□□□ 0.37
ATXN3-207ENST00000503767 SSUH2Q9Y2M2 353 aa17.36■□□□□ 0.37
ATXN3-207ENST00000503767 ZNF692Q9BU19 519 aaPredicted RBP17.31■□□□□ 0.36
ATXN3-207ENST00000503767 PIP4P2Q8N4L2 257 aa17.27■□□□□ 0.36
ATXN3-207ENST00000503767 FXR2P51116 673 aaKnown RBP eCLIP17.21■□□□□ 0.35
ATXN3-207ENST00000503767 SPDYE1Q8NFV5 336 aaPredicted RBP17.16■□□□□ 0.34
ATXN3-207ENST00000503767 PABPN1Q86U42 306 aaKnown RBP eCLIP17.07■□□□□ 0.32
ATXN3-207ENST00000503767 CLEC11AQ9Y240 323 aa17.06■□□□□ 0.32
ATXN3-207ENST00000503767 PRKAR2AP13861 404 aaKnown RBP16.91■□□□□ 0.3
ATXN3-207ENST00000503767 SPDYE4A6NLX3 237 aa16.85■□□□□ 0.29
ATXN3-207ENST00000503767 HAX1O00165 279 aa16.85■□□□□ 0.29
ATXN3-207ENST00000503767 SP7Q8TDD2 431 aaPredicted RBP16.85■□□□□ 0.29
ATXN3-207ENST00000503767 PRR29P0C7W0 189 aa16.83■□□□□ 0.28
ATXN3-207ENST00000503767 CHADLQ6NUI6 762 aa16.75■□□□□ 0.27
ATXN3-207ENST00000503767 EVX2Q03828 476 aa16.71■□□□□ 0.27
ATXN3-207ENST00000503767 C19orf67A6NJJ6 358 aa16.66■□□□□ 0.26
ATXN3-207ENST00000503767 STAG3Q9UJ98 1225 aa16.65■□□□□ 0.26
ATXN3-207ENST00000503767 PROM2Q8N271 834 aa16.56■□□□□ 0.24
ATXN3-207ENST00000503767 FARP1Q9Y4F1 1045 aaPredicted RBP16.56■□□□□ 0.24
ATXN3-207ENST00000503767 CREBZFQ9NS37 354 aa16.52■□□□□ 0.24
ATXN3-207ENST00000503767 CD44P16070 742 aaKnown RBP16.39■□□□□ 0.21
ATXN3-207ENST00000503767 GABBR2O75899 941 aa16.34■□□□□ 0.21
ATXN3-207ENST00000503767 MNX1P50219 401 aaPredicted RBP16.29■□□□□ 0.2
ATXN3-207ENST00000503767 FKBP8Q14318 412 aa16.19■□□□□ 0.18
ATXN3-207ENST00000503767 ZNF579Q8NAF0 562 aaKnown RBP16.19■□□□□ 0.18
ATXN3-207ENST00000503767 ZRANB1Q9UGI0 708 aa16.18■□□□□ 0.18
ATXN3-207ENST00000503767 NPM1P06748 294 aaKnown RBP eCLIP16.17■□□□□ 0.18
ATXN3-207ENST00000503767 CLCN6P51797 869 aa16.16■□□□□ 0.18
ATXN3-207ENST00000503767 PAK3O75914 559 aaPredicted RBP16.05■□□□□ 0.16
ATXN3-207ENST00000503767 POTEIP0CG38 1075 aa16.03■□□□□ 0.16
ATXN3-207ENST00000503767 MIER1Q8N108 512 aa16.02■□□□□ 0.16
ATXN3-207ENST00000503767 PHF12Q96QT6 1004 aa15.99■□□□□ 0.15
ATXN3-207ENST00000503767 PLEKHG5O94827 1062 aa15.96■□□□□ 0.15
ATXN3-207ENST00000503767 GALR2O43603 387 aaPredicted RBP15.95■□□□□ 0.14
ATXN3-207ENST00000503767 PLCD3Q8N3E9 789 aa15.91■□□□□ 0.14
ATXN3-207ENST00000503767 DCBLD2Q96PD2 775 aa15.89■□□□□ 0.13
ATXN3-207ENST00000503767 TSPYL2Q9H2G4 693 aaPredicted RBP15.88■□□□□ 0.13
ATXN3-207ENST00000503767 CCDC61Q9Y6R9 512 aa15.85■□□□□ 0.13
ATXN3-207ENST00000503767 RASEFQ8IZ41 740 aa15.84■□□□□ 0.13
ATXN3-207ENST00000503767 ZBTB47Q9UFB7 747 aaPredicted RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms