RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 NISCHQ9Y2I1 1504 aa15.88■□□□□ 0.13
ATXN3-203ENST00000393287 DCAF8L2P0C7V8 631 aa14.78□□□□□ -0.04
ATXN3-203ENST00000393287 ABCC9O60706 1549 aa13.78□□□□□ -0.2
ATXN3-203ENST00000393287 SHROOM4Q9ULL8 1493 aa13.7□□□□□ -0.22
ATXN3-203ENST00000393287 SUPT5HO00267 1087 aaKnown RBP13.51□□□□□ -0.25
ATXN3-203ENST00000393287 CCDC180Q9P1Z9 1646 aa13.5□□□□□ -0.25
ATXN3-203ENST00000393287 PABPN1Q86U42 306 aaKnown RBP eCLIP13.27□□□□□ -0.29
ATXN3-203ENST00000393287 FAM9AQ8IZU1 332 aaPredicted RBP13.2□□□□□ -0.3
ATXN3-203ENST00000393287 ZCCHC6Q5VYS8 1495 aaKnown RBP13.17□□□□□ -0.3
ATXN3-203ENST00000393287 RB1CC1Q8TDY2 1594 aa13.11□□□□□ -0.31
ATXN3-203ENST00000393287 NACADO15069 1562 aa13.06□□□□□ -0.32
ATXN3-203ENST00000393287 DCAF1Q9Y4B6 1507 aa12.92□□□□□ -0.34
ATXN3-203ENST00000393287 SCRIBQ14160 1630 aa12.92□□□□□ -0.34
ATXN3-203ENST00000393287 APLP2Q06481 763 aa12.88□□□□□ -0.35
ATXN3-203ENST00000393287 MYO15BQ96JP2 1530 aa12.84□□□□□ -0.35
ATXN3-203ENST00000393287 TRIM41Q8WV44 630 aa12.74□□□□□ -0.37
ATXN3-203ENST00000393287 EHMT2Q96KQ7 1210 aa12.54□□□□□ -0.4
ATXN3-203ENST00000393287 UBTFP17480 764 aaKnown RBP12.47□□□□□ -0.41
ATXN3-203ENST00000393287 BAZ1AQ9NRL2 1556 aaPredicted RBP12.45□□□□□ -0.42
ATXN3-203ENST00000393287 BAZ1BQ9UIG0 1483 aaKnown RBP12.43□□□□□ -0.42
ATXN3-203ENST00000393287 RSF1Q96T23 1441 aaPredicted RBP12.41□□□□□ -0.42
ATXN3-203ENST00000393287 CECR2Q9BXF3 1484 aa12.36□□□□□ -0.43
ATXN3-203ENST00000393287 RANGAP1P46060 587 aaPredicted RBP12.34□□□□□ -0.43
ATXN3-203ENST00000393287 ATP1B4Q9UN42 357 aaPredicted RBP12.33□□□□□ -0.44
ATXN3-203ENST00000393287 CHIC1Q5VXU3 224 aa12.31□□□□□ -0.44
ATXN3-203ENST00000393287 SMARCA2P51531 1590 aa12.3□□□□□ -0.44
ATXN3-203ENST00000393287 FBLN2P98095 1184 aa12.27□□□□□ -0.44
ATXN3-203ENST00000393287 ERCC6Q03468 1493 aa12.24□□□□□ -0.45
ATXN3-203ENST00000393287 ATAD2BQ9ULI0 1458 aa12.2□□□□□ -0.46
ATXN3-203ENST00000393287 ZEB1P37275 1124 aaPredicted RBP12.2□□□□□ -0.46
ATXN3-203ENST00000393287 PDS5BQ9NTI5 1447 aa12.19□□□□□ -0.46
ATXN3-203ENST00000393287 MROH2BQ7Z745 1585 aa12.19□□□□□ -0.46
ATXN3-203ENST00000393287 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.16□□□□□ -0.46
ATXN3-203ENST00000393287 HNRNPUL2Q1KMD3 747 aaKnown RBP12.16□□□□□ -0.46
ATXN3-203ENST00000393287 TTBK1Q5TCY1 1321 aaPredicted RBP12.15□□□□□ -0.46
ATXN3-203ENST00000393287 NCAPD3P42695 1498 aa12.14□□□□□ -0.47
ATXN3-203ENST00000393287 CADPSQ9ULU8 1353 aa12.13□□□□□ -0.47
ATXN3-203ENST00000393287 CSRNP3Q8WYN3 585 aa12.11□□□□□ -0.47
ATXN3-203ENST00000393287 EIF4G1Q04637 1599 aaKnown RBP12.1□□□□□ -0.47
ATXN3-203ENST00000393287 CHMP7Q8WUX9 453 aaPredicted RBP12.07□□□□□ -0.48
ATXN3-203ENST00000393287 SMARCA4P51532 1647 aa12.06□□□□□ -0.48
ATXN3-203ENST00000393287 WRNQ14191 1432 aaPredicted RBP eCLIP12.05□□□□□ -0.48
ATXN3-203ENST00000393287 MYT1LQ9UL68 1186 aa12.03□□□□□ -0.48
ATXN3-203ENST00000393287 TOP2AP11388 1531 aaKnown RBP12.02□□□□□ -0.49
ATXN3-203ENST00000393287 CCDC88BA6NC98 1476 aa12□□□□□ -0.49
ATXN3-203ENST00000393287 BICRAQ9NZM4 1560 aa12□□□□□ -0.49
ATXN3-203ENST00000393287 DNAJC5BQ9UF47 199 aa11.99□□□□□ -0.49
ATXN3-203ENST00000393287 NPM1P06748 294 aaKnown RBP eCLIP11.97□□□□□ -0.49
ATXN3-203ENST00000393287 EEA1Q15075 1411 aa11.96□□□□□ -0.49
ATXN3-203ENST00000393287 PELP1Q8IZL8 1130 aaKnown RBP11.96□□□□□ -0.49
ATXN3-203ENST00000393287 CCER1Q8TC90 406 aaPredicted RBP11.96□□□□□ -0.5
ATXN3-203ENST00000393287 CDK11AQ9UQ88 783 aaPredicted RBP11.94□□□□□ -0.5
ATXN3-203ENST00000393287 TRIM26Q12899 539 aaPredicted RBP11.94□□□□□ -0.5
ATXN3-203ENST00000393287 KIF27Q86VH2 1401 aa11.93□□□□□ -0.5
ATXN3-203ENST00000393287 CC2D2AQ9P2K1 1620 aa11.91□□□□□ -0.5
ATXN3-203ENST00000393287 PCGF6Q9BYE7 350 aa11.91□□□□□ -0.5
ATXN3-203ENST00000393287 LOC105371045A0A1W2PR82 267 aa11.91□□□□□ -0.5
ATXN3-203ENST00000393287 CEP164Q9UPV0 1460 aa11.91□□□□□ -0.5
ATXN3-203ENST00000393287 HMGXB3Q12766 1538 aa11.9□□□□□ -0.5
ATXN3-203ENST00000393287 ABCC8Q09428 1581 aa11.87□□□□□ -0.51
ATXN3-203ENST00000393287 FANCD2Q9BXW9 1451 aa11.87□□□□□ -0.51
ATXN3-203ENST00000393287 WIZO95785 1651 aa11.86□□□□□ -0.51
ATXN3-203ENST00000393287 SOGA1O94964 1423 aa11.85□□□□□ -0.51
ATXN3-203ENST00000393287 P3H3Q8IVL6 736 aa11.84□□□□□ -0.51
ATXN3-203ENST00000393287 CUX2O14529 1486 aa11.81□□□□□ -0.52
ATXN3-203ENST00000393287 TDRD9Q8NDG6 1382 aaKnown RBP11.8□□□□□ -0.52
ATXN3-203ENST00000393287 CFTRP13569 1480 aa11.78□□□□□ -0.52
ATXN3-203ENST00000393287 ACIN1Q9UKV3 1341 aaKnown RBP11.76□□□□□ -0.53
ATXN3-203ENST00000393287 CARMIL1Q5VZK9 1371 aa11.75□□□□□ -0.53
ATXN3-203ENST00000393287 FAM50AQ14320 339 aaKnown RBP11.74□□□□□ -0.53
ATXN3-203ENST00000393287 ARID3CA6NKF2 412 aa11.73□□□□□ -0.53
ATXN3-203ENST00000393287 GOLGA3Q08378 1498 aa11.73□□□□□ -0.53
ATXN3-203ENST00000393287 ITGAEP38570 1179 aa11.72□□□□□ -0.53
ATXN3-203ENST00000393287 OSCARQ8IYS5 282 aa11.71□□□□□ -0.53
ATXN3-203ENST00000393287 MRC2Q9UBG0 1479 aa11.7□□□□□ -0.54
ATXN3-203ENST00000393287 PPARGC1BQ86YN6 1023 aaKnown RBP11.69□□□□□ -0.54
ATXN3-203ENST00000393287 NESP48681 1621 aa11.68□□□□□ -0.54
ATXN3-203ENST00000393287 PEG3Q9GZU2 1588 aa11.67□□□□□ -0.54
ATXN3-203ENST00000393287 PLEKHD1A6NEE1 506 aa11.66□□□□□ -0.54
ATXN3-203ENST00000393287 CARMIL2Q6F5E8 1435 aa11.65□□□□□ -0.54
ATXN3-203ENST00000393287 TRIM52Q96A61 297 aa11.65□□□□□ -0.55
ATXN3-203ENST00000393287 CLIP1P30622 1438 aa11.64□□□□□ -0.55
ATXN3-203ENST00000393287 CENPBP07199 599 aaPredicted RBP11.63□□□□□ -0.55
ATXN3-203ENST00000393287 LAMC3Q9Y6N6 1575 aa11.63□□□□□ -0.55
ATXN3-203ENST00000393287 ESF1Q9H501 851 aaKnown RBP11.62□□□□□ -0.55
ATXN3-203ENST00000393287 ZNF777Q9ULD5 760 aaPredicted RBP11.61□□□□□ -0.55
ATXN3-203ENST00000393287 IFT140Q96RY7 1462 aa11.61□□□□□ -0.55
ATXN3-203ENST00000393287 FGD5Q6ZNL6 1462 aa11.61□□□□□ -0.55
ATXN3-203ENST00000393287 TNIKQ9UKE5 1360 aa11.59□□□□□ -0.55
ATXN3-203ENST00000393287 MTUS2Q5JR59 1369 aa11.57□□□□□ -0.56
ATXN3-203ENST00000393287 GAPVD1Q14C86 1478 aa11.57□□□□□ -0.56
ATXN3-203ENST00000393287 JPH4Q96JJ6 628 aa11.56□□□□□ -0.56
ATXN3-203ENST00000393287 KCNH8Q96L42 1107 aa11.56□□□□□ -0.56
ATXN3-203ENST00000393287 UNC13AQ9UPW8 1703 aa11.56□□□□□ -0.56
ATXN3-203ENST00000393287 RAPGEF2Q9Y4G8 1499 aa11.55□□□□□ -0.56
ATXN3-203ENST00000393287 RAD54L2Q9Y4B4 1467 aa11.54□□□□□ -0.56
ATXN3-203ENST00000393287 FHAD1B1AJZ9 1412 aa11.54□□□□□ -0.56
ATXN3-203ENST00000393287 TRHP20396 242 aaPredicted RBP11.54□□□□□ -0.56
ATXN3-203ENST00000393287 GRIN2BQ13224 1484 aa11.54□□□□□ -0.56
ATXN3-203ENST00000393287 TOPBP1Q92547 1522 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms