RNA–Protein interactions for RNA: ENST00000304611.12

PEX6-202, Transcript of peroxisomal biogenesis factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PEX6, Length 3,478 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX6-202ENST00000304611 NISCHQ9Y2I1 1504 aa31.34■■■□□ 2.61
PEX6-202ENST00000304611 SHROOM4Q9ULL8 1493 aa28.72■■■□□ 2.19
PEX6-202ENST00000304611 SUPT5HO00267 1087 aaKnown RBP28.35■■■□□ 2.13
PEX6-202ENST00000304611 DCAF8L2P0C7V8 631 aa28.3■■■□□ 2.12
PEX6-202ENST00000304611 PPARGC1BQ86YN6 1023 aaKnown RBP27.68■■■□□ 2.02
PEX6-202ENST00000304611 PCGF6Q9BYE7 350 aa27.62■■■□□ 2.01
PEX6-202ENST00000304611 HRCP23327 699 aa27.58■■■□□ 2.01
PEX6-202ENST00000304611 EHMT2Q96KQ7 1210 aa26.93■■□□□ 1.9
PEX6-202ENST00000304611 PELP1Q8IZL8 1130 aaKnown RBP26.8■■□□□ 1.88
PEX6-202ENST00000304611 CHIC1Q5VXU3 224 aa26.8■■□□□ 1.88
PEX6-202ENST00000304611 LOC105371045A0A1W2PR82 267 aa26.71■■□□□ 1.87
PEX6-202ENST00000304611 MYO15BQ96JP2 1530 aa26.58■■□□□ 1.85
PEX6-202ENST00000304611 FAM9AQ8IZU1 332 aaPredicted RBP26.49■■□□□ 1.83
PEX6-202ENST00000304611 SCAF1Q9H7N4 1312 aaKnown RBP26.41■■□□□ 1.82
PEX6-202ENST00000304611 ZCCHC6Q5VYS8 1495 aaKnown RBP26.35■■□□□ 1.81
PEX6-202ENST00000304611 TRIM26Q12899 539 aaPredicted RBP26.05■■□□□ 1.76
PEX6-202ENST00000304611 TTBK1Q5TCY1 1321 aaPredicted RBP25.96■■□□□ 1.75
PEX6-202ENST00000304611 CCDC180Q9P1Z9 1646 aa25.95■■□□□ 1.75
PEX6-202ENST00000304611 TRIM41Q8WV44 630 aa25.89■■□□□ 1.73
PEX6-202ENST00000304611 ABCC9O60706 1549 aa25.89■■□□□ 1.73
PEX6-202ENST00000304611 GTF3C3Q9Y5Q9 886 aa25.82■■□□□ 1.72
PEX6-202ENST00000304611 ZEB1P37275 1124 aaPredicted RBP25.78■■□□□ 1.72
PEX6-202ENST00000304611 NEUROD1Q13562 356 aa25.75■■□□□ 1.71
PEX6-202ENST00000304611 MYT1Q01538 1121 aa25.71■■□□□ 1.71
PEX6-202ENST00000304611 YTHDC1Q96MU7 727 aaKnown RBP25.71■■□□□ 1.71
PEX6-202ENST00000304611 ACIN1Q9UKV3 1341 aaKnown RBP25.65■■□□□ 1.7
PEX6-202ENST00000304611 CENPBP07199 599 aaPredicted RBP25.57■■□□□ 1.68
PEX6-202ENST00000304611 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.51■■□□□ 1.68
PEX6-202ENST00000304611 CCER1Q8TC90 406 aaPredicted RBP25.51■■□□□ 1.67
PEX6-202ENST00000304611 SCRIBQ14160 1630 aa25.5■■□□□ 1.67
PEX6-202ENST00000304611 DCAF1Q9Y4B6 1507 aa25.38■■□□□ 1.65
PEX6-202ENST00000304611 DIEXFQ68CQ4 756 aaKnown RBP25.34■■□□□ 1.65
PEX6-202ENST00000304611 PABPN1Q86U42 306 aaKnown RBP eCLIP25.25■■□□□ 1.639e-7■■■■□ 23.9
PEX6-202ENST00000304611 RANGAP1P46060 587 aaPredicted RBP25.24■■□□□ 1.63
PEX6-202ENST00000304611 RSF1Q96T23 1441 aaPredicted RBP25.22■■□□□ 1.63
PEX6-202ENST00000304611 CECR2Q9BXF3 1484 aa25.05■■□□□ 1.6
PEX6-202ENST00000304611 RB1CC1Q8TDY2 1594 aa25.01■■□□□ 1.59
PEX6-202ENST00000304611 UBTFP17480 764 aaKnown RBP24.92■■□□□ 1.58
PEX6-202ENST00000304611 MROH2BQ7Z745 1585 aa24.72■■□□□ 1.55
PEX6-202ENST00000304611 HNRNPUL2Q1KMD3 747 aaKnown RBP24.69■■□□□ 1.54
PEX6-202ENST00000304611 MIER1Q8N108 512 aa24.65■■□□□ 1.54
PEX6-202ENST00000304611 ZNF316A6NFI3 1004 aaPredicted RBP24.58■■□□□ 1.52
PEX6-202ENST00000304611 BCL11AQ9H165 835 aa24.58■■□□□ 1.52
PEX6-202ENST00000304611 WIZO95785 1651 aa24.57■■□□□ 1.52
PEX6-202ENST00000304611 BCANQ96GW7 911 aa24.54■■□□□ 1.52
PEX6-202ENST00000304611 ABCC8Q09428 1581 aa24.47■■□□□ 1.51
PEX6-202ENST00000304611 NACADO15069 1562 aa24.46■■□□□ 1.51
PEX6-202ENST00000304611 SOGA1O94964 1423 aa24.39■■□□□ 1.49
PEX6-202ENST00000304611 CCDC88BA6NC98 1476 aa24.36■■□□□ 1.49
PEX6-202ENST00000304611 CSRNP3Q8WYN3 585 aa24.33■■□□□ 1.49
PEX6-202ENST00000304611 ANP32EQ9BTT0 268 aa24.3■■□□□ 1.48
PEX6-202ENST00000304611 APLP2Q06481 763 aa24.29■■□□□ 1.48
PEX6-202ENST00000304611 RUSC2Q8N2Y8 1516 aa24.28■■□□□ 1.48
PEX6-202ENST00000304611 ITGAEP38570 1179 aa24.27■■□□□ 1.48
PEX6-202ENST00000304611 SUPT16HQ9Y5B9 1047 aaKnown RBP24.19■■□□□ 1.46
PEX6-202ENST00000304611 CEP162Q5TB80 1403 aa24.18■■□□□ 1.46
PEX6-202ENST00000304611 TSHZ2Q9NRE2 1034 aa24.12■■□□□ 1.45
PEX6-202ENST00000304611 ATP1B4Q9UN42 357 aaPredicted RBP24.04■■□□□ 1.44
PEX6-202ENST00000304611 BAZ1AQ9NRL2 1556 aaPredicted RBP24.02■■□□□ 1.44
PEX6-202ENST00000304611 ERICH6Q7L0X2 663 aa24■■□□□ 1.43
PEX6-202ENST00000304611 FKBP8Q14318 412 aa23.94■■□□□ 1.42
PEX6-202ENST00000304611 NEFLP07196 543 aa23.83■■□□□ 1.41
PEX6-202ENST00000304611 TNIKQ9UKE5 1360 aa23.83■■□□□ 1.41
PEX6-202ENST00000304611 WRNQ14191 1432 aaPredicted RBP eCLIP23.82■■□□□ 1.4
PEX6-202ENST00000304611 P3H3Q8IVL6 736 aa23.79■■□□□ 1.4
PEX6-202ENST00000304611 SMARCA4P51532 1647 aa23.79■■□□□ 1.4
PEX6-202ENST00000304611 KCNH8Q96L42 1107 aa23.77■■□□□ 1.4
PEX6-202ENST00000304611 CLIP1P30622 1438 aa23.76■■□□□ 1.39
PEX6-202ENST00000304611 SMARCA2P51531 1590 aa23.75■■□□□ 1.39
PEX6-202ENST00000304611 TOP2AP11388 1531 aaKnown RBP23.74■■□□□ 1.39
PEX6-202ENST00000304611 KANK4Q5T7N3 995 aaPredicted RBP23.7■■□□□ 1.38
PEX6-202ENST00000304611 GOLGA3Q08378 1498 aa23.68■■□□□ 1.38
PEX6-202ENST00000304611 RBM19Q9Y4C8 960 aaKnown RBP23.67■■□□□ 1.38
PEX6-202ENST00000304611 BAZ1BQ9UIG0 1483 aaKnown RBP23.65■■□□□ 1.38
PEX6-202ENST00000304611 HIRIP3Q9BW71 556 aaPredicted RBP23.65■■□□□ 1.38
PEX6-202ENST00000304611 TRIM52Q96A61 297 aa23.64■■□□□ 1.38
PEX6-202ENST00000304611 RAPGEF2Q9Y4G8 1499 aa23.61■■□□□ 1.37
PEX6-202ENST00000304611 IRX6P78412 446 aaPredicted RBP23.6■■□□□ 1.37
PEX6-202ENST00000304611 UNC13AQ9UPW8 1703 aa23.59■■□□□ 1.37
PEX6-202ENST00000304611 PRKCSHP14314 528 aaPredicted RBP23.57■■□□□ 1.36
PEX6-202ENST00000304611 FAM50AQ14320 339 aaKnown RBP23.55■■□□□ 1.36
PEX6-202ENST00000304611 BICRAQ9NZM4 1560 aa23.51■■□□□ 1.35
PEX6-202ENST00000304611 DDX10Q13206 875 aaKnown RBP23.5■■□□□ 1.35
PEX6-202ENST00000304611 EIF4G1Q04637 1599 aaKnown RBP23.49■■□□□ 1.35
PEX6-202ENST00000304611 CLSPNQ9HAW4 1339 aa23.49■■□□□ 1.35
PEX6-202ENST00000304611 ATAD2BQ9ULI0 1458 aa23.49■■□□□ 1.35
PEX6-202ENST00000304611 SYNJ1O43426 1573 aa23.46■■□□□ 1.35
PEX6-202ENST00000304611 NBR1Q14596 966 aa23.45■■□□□ 1.34
PEX6-202ENST00000304611 CEP164Q9UPV0 1460 aa23.45■■□□□ 1.34
PEX6-202ENST00000304611 EEA1Q15075 1411 aa23.41■■□□□ 1.34
PEX6-202ENST00000304611 ARID3CA6NKF2 412 aa23.38■■□□□ 1.33
PEX6-202ENST00000304611 VPS8Q8N3P4 1428 aa23.37■■□□□ 1.33
PEX6-202ENST00000304611 SIN3AQ96ST3 1273 aa23.36■■□□□ 1.33
PEX6-202ENST00000304611 CNGB1Q14028 1251 aaPredicted RBP23.36■■□□□ 1.33
PEX6-202ENST00000304611 MSH5O43196 834 aa23.32■■□□□ 1.32
PEX6-202ENST00000304611 CDK11AQ9UQ88 783 aaPredicted RBP23.31■■□□□ 1.32
PEX6-202ENST00000304611 RTN4Q9NQC3 1192 aaKnown RBP23.29■■□□□ 1.32
PEX6-202ENST00000304611 DEKP35659 375 aaKnown RBP23.27■■□□□ 1.31
PEX6-202ENST00000304611 ANO8Q9HCE9 1232 aaPredicted RBP23.25■■□□□ 1.31
PEX6-202ENST00000304611 CCDC136Q96JN2 1154 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms