RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 AEBP2Q6ZN18 517 aaPredicted RBP24.59■■□□□ 1.53
ATXN3-243ENST00000556671 CHIC1Q5VXU3 224 aa23.61■■□□□ 1.37
ATXN3-243ENST00000556671 SENP3Q9H4L4 574 aaPredicted RBP20.93■□□□□ 0.94
ATXN3-243ENST00000556671 PHF23Q9BUL5 403 aaPredicted RBP20.72■□□□□ 0.91
ATXN3-243ENST00000556671 FOXD1Q16676 465 aa19.49■□□□□ 0.71
ATXN3-243ENST00000556671 PLPPR3Q6T4P5 718 aa18.98■□□□□ 0.63
ATXN3-243ENST00000556671 PPP6R1Q9UPN7 881 aa18.42■□□□□ 0.54
ATXN3-243ENST00000556671 ADRA2BP18089 450 aa18.36■□□□□ 0.53
ATXN3-243ENST00000556671 PIAS4Q8N2W9 510 aaPredicted RBP18.25■□□□□ 0.51
ATXN3-243ENST00000556671 MSH5O43196 834 aa18.13■□□□□ 0.49
ATXN3-243ENST00000556671 POTEDQ86YR6 584 aa17.25■□□□□ 0.35
ATXN3-243ENST00000556671 SCAF1Q9H7N4 1312 aaKnown RBP16.8■□□□□ 0.28
ATXN3-243ENST00000556671 MAPK8IP2Q13387 824 aaPredicted RBP16.78■□□□□ 0.28
ATXN3-243ENST00000556671 PPP4R3CPQ6ZMV5 832 aa16.67■□□□□ 0.26
ATXN3-243ENST00000556671 DMRT2Q9Y5R5 561 aa16.65■□□□□ 0.26
ATXN3-243ENST00000556671 CNKSR2Q8WXI2 1034 aa16.3■□□□□ 0.2
ATXN3-243ENST00000556671 HOXD11P31277 338 aaPredicted RBP16.15■□□□□ 0.18
ATXN3-243ENST00000556671 NCBP3Q53F19 620 aaKnown RBP16.1■□□□□ 0.17
ATXN3-243ENST00000556671 RNF216Q9NWF9 866 aaPredicted RBP16.1■□□□□ 0.17
ATXN3-243ENST00000556671 DCAF8L1A6NGE4 600 aa15.9■□□□□ 0.14
ATXN3-243ENST00000556671 NPM3O75607 178 aaKnown RBP15.88■□□□□ 0.13
ATXN3-243ENST00000556671 KCNA4P22459 653 aa15.8■□□□□ 0.12
ATXN3-243ENST00000556671 DNAJC5BQ9UF47 199 aa15.56■□□□□ 0.08
ATXN3-243ENST00000556671 RNF39Q9H2S5 420 aa15.5■□□□□ 0.07
ATXN3-243ENST00000556671 CACNB1Q02641 598 aaPredicted RBP15.37■□□□□ 0.05
ATXN3-243ENST00000556671 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.34■□□□□ 0.05
ATXN3-243ENST00000556671 C1QBPQ07021 282 aaKnown RBP15.29■□□□□ 0.04
ATXN3-243ENST00000556671 SLC4A2P04920 1241 aa15.11■□□□□ 0.01
ATXN3-243ENST00000556671 U3KPZ7 1027 aaPredicted RBP15.08■□□□□ 0
ATXN3-243ENST00000556671 SLC4A1APQ9BWU0 796 aaKnown RBP14.96□□□□□ -0.01
ATXN3-243ENST00000556671 SPINK5Q9NQ38 1064 aaPredicted RBP14.77□□□□□ -0.05
ATXN3-243ENST00000556671 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.73□□□□□ -0.05
ATXN3-243ENST00000556671 HNRNPUL2Q1KMD3 747 aaKnown RBP14.73□□□□□ -0.05
ATXN3-243ENST00000556671 CAPN15O75808 1086 aa14.72□□□□□ -0.05
ATXN3-243ENST00000556671 MYCNP04198 464 aaPredicted RBP14.68□□□□□ -0.06
ATXN3-243ENST00000556671 APLP2Q06481 763 aa14.68□□□□□ -0.06
ATXN3-243ENST00000556671 FOXD4L1Q9NU39 408 aa14.67□□□□□ -0.06
ATXN3-243ENST00000556671 SAMD1Q6SPF0 538 aaPredicted RBP14.66□□□□□ -0.06
ATXN3-243ENST00000556671 DSG3P32926 999 aa14.6□□□□□ -0.07
ATXN3-243ENST00000556671 TRHP20396 242 aaPredicted RBP14.55□□□□□ -0.08
ATXN3-243ENST00000556671 ZNF219Q9P2Y4 722 aaPredicted RBP14.55□□□□□ -0.08
ATXN3-243ENST00000556671 ZBTB22O15209 634 aa14.53□□□□□ -0.08
ATXN3-243ENST00000556671 ABCB7O75027 752 aa14.4□□□□□ -0.1
ATXN3-243ENST00000556671 ATF5Q9Y2D1 282 aaPredicted RBP14.32□□□□□ -0.12
ATXN3-243ENST00000556671 POLA2Q14181 598 aa14.23□□□□□ -0.13
ATXN3-243ENST00000556671 ATXN8OSP0DMR3 200 aa14.2□□□□□ -0.14
ATXN3-243ENST00000556671 CSRNP3Q8WYN3 585 aa14.11□□□□□ -0.15
ATXN3-243ENST00000556671 EHMT2Q96KQ7 1210 aa14.03□□□□□ -0.16
ATXN3-243ENST00000556671 ZBTB12Q9Y330 459 aaPredicted RBP13.97□□□□□ -0.17
ATXN3-243ENST00000556671 RBM42Q9BTD8 480 aaKnown RBP13.92□□□□□ -0.18
ATXN3-243ENST00000556671 OSCARQ8IYS5 282 aa13.76□□□□□ -0.21
ATXN3-243ENST00000556671 FBLN2P98095 1184 aa13.73□□□□□ -0.21
ATXN3-243ENST00000556671 MKRN4PQ13434 485 aaPredicted RBP13.68□□□□□ -0.22
ATXN3-243ENST00000556671 AKT1S1Q96B36 256 aa13.66□□□□□ -0.22
ATXN3-243ENST00000556671 POTEHQ6S545 545 aa13.57□□□□□ -0.24
ATXN3-243ENST00000556671 SPDYE2BA6NHP3 402 aa13.56□□□□□ -0.24
ATXN3-243ENST00000556671 SPDYE6P0CI01 402 aa13.56□□□□□ -0.24
ATXN3-243ENST00000556671 SPDYE2Q495Y8 402 aa13.56□□□□□ -0.24
ATXN3-243ENST00000556671 REM2Q8IYK8 340 aaPredicted RBP13.52□□□□□ -0.25
ATXN3-243ENST00000556671 CHRDL2Q6WN34 429 aa13.5□□□□□ -0.25
ATXN3-243ENST00000556671 SSUH2Q9Y2M2 353 aa13.43□□□□□ -0.26
ATXN3-243ENST00000556671 ZNF692Q9BU19 519 aaPredicted RBP13.42□□□□□ -0.26
ATXN3-243ENST00000556671 PITPNM1O00562 1244 aa13.38□□□□□ -0.27
ATXN3-243ENST00000556671 SPDYE1Q8NFV5 336 aaPredicted RBP13.26□□□□□ -0.29
ATXN3-243ENST00000556671 PABPN1Q86U42 306 aaKnown RBP eCLIP13.24□□□□□ -0.29
ATXN3-243ENST00000556671 PIP4P2Q8N4L2 257 aa13.24□□□□□ -0.29
ATXN3-243ENST00000556671 FXR2P51116 673 aaKnown RBP eCLIP13.22□□□□□ -0.29
ATXN3-243ENST00000556671 CLEC11AQ9Y240 323 aa13.2□□□□□ -0.3
ATXN3-243ENST00000556671 SPDYE4A6NLX3 237 aa13.15□□□□□ -0.3
ATXN3-243ENST00000556671 PRR29P0C7W0 189 aa13.03□□□□□ -0.32
ATXN3-243ENST00000556671 PRKAR2AP13861 404 aaKnown RBP13.03□□□□□ -0.32
ATXN3-243ENST00000556671 STAG3Q9UJ98 1225 aa12.94□□□□□ -0.34
ATXN3-243ENST00000556671 CHADLQ6NUI6 762 aa12.93□□□□□ -0.34
ATXN3-243ENST00000556671 PROM2Q8N271 834 aa12.92□□□□□ -0.34
ATXN3-243ENST00000556671 HAX1O00165 279 aa12.91□□□□□ -0.34
ATXN3-243ENST00000556671 SP7Q8TDD2 431 aaPredicted RBP12.84□□□□□ -0.35
ATXN3-243ENST00000556671 C19orf67A6NJJ6 358 aa12.79□□□□□ -0.36
ATXN3-243ENST00000556671 EVX2Q03828 476 aa12.79□□□□□ -0.36
ATXN3-243ENST00000556671 CREBZFQ9NS37 354 aa12.79□□□□□ -0.36
ATXN3-243ENST00000556671 FARP1Q9Y4F1 1045 aaPredicted RBP12.78□□□□□ -0.36
ATXN3-243ENST00000556671 FKBP8Q14318 412 aa12.76□□□□□ -0.37
ATXN3-243ENST00000556671 CD44P16070 742 aaKnown RBP12.63□□□□□ -0.39
ATXN3-243ENST00000556671 MNX1P50219 401 aaPredicted RBP12.62□□□□□ -0.39
ATXN3-243ENST00000556671 NPM1P06748 294 aaKnown RBP eCLIP12.55□□□□□ -0.4
ATXN3-243ENST00000556671 GABBR2O75899 941 aa12.52□□□□□ -0.41
ATXN3-243ENST00000556671 MIER1Q8N108 512 aa12.5□□□□□ -0.41
ATXN3-243ENST00000556671 ZRANB1Q9UGI0 708 aa12.49□□□□□ -0.41
ATXN3-243ENST00000556671 PLEKHG5O94827 1062 aa12.47□□□□□ -0.41
ATXN3-243ENST00000556671 ZNF579Q8NAF0 562 aaKnown RBP12.47□□□□□ -0.41
ATXN3-243ENST00000556671 PAK3O75914 559 aaPredicted RBP12.44□□□□□ -0.42
ATXN3-243ENST00000556671 CLCN6P51797 869 aa12.43□□□□□ -0.42
ATXN3-243ENST00000556671 PLCD3Q8N3E9 789 aa12.43□□□□□ -0.42
ATXN3-243ENST00000556671 FBXO3Q9UK99 471 aa12.43□□□□□ -0.42
ATXN3-243ENST00000556671 PHF12Q96QT6 1004 aa12.34□□□□□ -0.43
ATXN3-243ENST00000556671 ZBTB47Q9UFB7 747 aaPredicted RBP12.34□□□□□ -0.43
ATXN3-243ENST00000556671 TSPYL2Q9H2G4 693 aaPredicted RBP12.31□□□□□ -0.44
ATXN3-243ENST00000556671 RASEFQ8IZ41 740 aa12.3□□□□□ -0.44
ATXN3-243ENST00000556671 GALR2O43603 387 aaPredicted RBP12.29□□□□□ -0.44
ATXN3-243ENST00000556671 CCDC61Q9Y6R9 512 aa12.28□□□□□ -0.44
ATXN3-243ENST00000556671 POTEIP0CG38 1075 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms