RNA–Protein interactions for RNA: ENST00000507965.5

ATXN3-210, Transcript of ataxin 3, humanhuman

TSL 2

Gene ATXN3, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-210ENST00000507965 AEBP2Q6ZN18 517 aaPredicted RBP24.34■■□□□ 1.49
ATXN3-210ENST00000507965 CHIC1Q5VXU3 224 aa22.95■■□□□ 1.26
ATXN3-210ENST00000507965 SENP3Q9H4L4 574 aaPredicted RBP20.86■□□□□ 0.93
ATXN3-210ENST00000507965 PHF23Q9BUL5 403 aaPredicted RBP20.55■□□□□ 0.88
ATXN3-210ENST00000507965 FOXD1Q16676 465 aa19.43■□□□□ 0.7
ATXN3-210ENST00000507965 MSH5O43196 834 aa18.31■□□□□ 0.52
ATXN3-210ENST00000507965 PLPPR3Q6T4P5 718 aa18.28■□□□□ 0.52
ATXN3-210ENST00000507965 POTEDQ86YR6 584 aa18.18■□□□□ 0.5
ATXN3-210ENST00000507965 PIAS4Q8N2W9 510 aaPredicted RBP18.16■□□□□ 0.5
ATXN3-210ENST00000507965 PPP6R1Q9UPN7 881 aa17.99■□□□□ 0.47
ATXN3-210ENST00000507965 ADRA2BP18089 450 aa17.95■□□□□ 0.46
ATXN3-210ENST00000507965 MAPK8IP2Q13387 824 aaPredicted RBP16.55■□□□□ 0.24
ATXN3-210ENST00000507965 SCAF1Q9H7N4 1312 aaKnown RBP16.49■□□□□ 0.23
ATXN3-210ENST00000507965 DMRT2Q9Y5R5 561 aa16.49■□□□□ 0.23
ATXN3-210ENST00000507965 PPP4R3CPQ6ZMV5 832 aa15.99■□□□□ 0.15
ATXN3-210ENST00000507965 DCAF8L1A6NGE4 600 aa15.91■□□□□ 0.14
ATXN3-210ENST00000507965 CACNB1Q02641 598 aaPredicted RBP15.86■□□□□ 0.13
ATXN3-210ENST00000507965 HOXD11P31277 338 aaPredicted RBP15.79■□□□□ 0.12
ATXN3-210ENST00000507965 CNKSR2Q8WXI2 1034 aa15.75■□□□□ 0.11
ATXN3-210ENST00000507965 RNF216Q9NWF9 866 aaPredicted RBP15.65■□□□□ 0.1
ATXN3-210ENST00000507965 RNF39Q9H2S5 420 aa15.56■□□□□ 0.08
ATXN3-210ENST00000507965 C1QBPQ07021 282 aaKnown RBP15.36■□□□□ 0.05
ATXN3-210ENST00000507965 NCBP3Q53F19 620 aaKnown RBP15.36■□□□□ 0.05
ATXN3-210ENST00000507965 DNAJC5BQ9UF47 199 aa15.28■□□□□ 0.04
ATXN3-210ENST00000507965 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.11■□□□□ 0.01
ATXN3-210ENST00000507965 NPM3O75607 178 aaKnown RBP15.07■□□□□ 0
ATXN3-210ENST00000507965 U3KPZ7 1027 aaPredicted RBP14.71□□□□□ -0.05
ATXN3-210ENST00000507965 CAPN15O75808 1086 aa14.61□□□□□ -0.07
ATXN3-210ENST00000507965 KCNA4P22459 653 aa14.6□□□□□ -0.07
ATXN3-210ENST00000507965 SPINK5Q9NQ38 1064 aaPredicted RBP14.57□□□□□ -0.08
ATXN3-210ENST00000507965 DSG3P32926 999 aa14.52□□□□□ -0.09
ATXN3-210ENST00000507965 SLC4A2P04920 1241 aa14.42□□□□□ -0.1
ATXN3-210ENST00000507965 APLP2Q06481 763 aa14.37□□□□□ -0.11
ATXN3-210ENST00000507965 TRHP20396 242 aaPredicted RBP14.33□□□□□ -0.12
ATXN3-210ENST00000507965 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.29□□□□□ -0.12
ATXN3-210ENST00000507965 HNRNPUL2Q1KMD3 747 aaKnown RBP14.29□□□□□ -0.12
ATXN3-210ENST00000507965 ZNF219Q9P2Y4 722 aaPredicted RBP14.28□□□□□ -0.12
ATXN3-210ENST00000507965 ABCB7O75027 752 aa14.24□□□□□ -0.13
ATXN3-210ENST00000507965 POTEHQ6S545 545 aa14.23□□□□□ -0.13
ATXN3-210ENST00000507965 SAMD1Q6SPF0 538 aaPredicted RBP14.17□□□□□ -0.14
ATXN3-210ENST00000507965 NISCHQ9Y2I1 1504 aa14.15□□□□□ -0.14
ATXN3-210ENST00000507965 MYCNP04198 464 aaPredicted RBP13.98□□□□□ -0.17
ATXN3-210ENST00000507965 RBM42Q9BTD8 480 aaKnown RBP13.91□□□□□ -0.18
ATXN3-210ENST00000507965 POLA2Q14181 598 aa13.87□□□□□ -0.19
ATXN3-210ENST00000507965 SLC4A1APQ9BWU0 796 aaKnown RBP13.78□□□□□ -0.2
ATXN3-210ENST00000507965 FOXD4L1Q9NU39 408 aa13.71□□□□□ -0.21
ATXN3-210ENST00000507965 CHRDL2Q6WN34 429 aa13.65□□□□□ -0.22
ATXN3-210ENST00000507965 ATF5Q9Y2D1 282 aaPredicted RBP13.62□□□□□ -0.23
ATXN3-210ENST00000507965 ZBTB12Q9Y330 459 aaPredicted RBP13.6□□□□□ -0.23
ATXN3-210ENST00000507965 AKT1S1Q96B36 256 aa13.52□□□□□ -0.25
ATXN3-210ENST00000507965 OSCARQ8IYS5 282 aa13.42□□□□□ -0.26
ATXN3-210ENST00000507965 REM2Q8IYK8 340 aaPredicted RBP13.39□□□□□ -0.27
ATXN3-210ENST00000507965 ZBTB22O15209 634 aa13.38□□□□□ -0.27
ATXN3-210ENST00000507965 ATXN8OSP0DMR3 200 aa13.31□□□□□ -0.28
ATXN3-210ENST00000507965 PIP4P2Q8N4L2 257 aa13.28□□□□□ -0.28
ATXN3-210ENST00000507965 SP7Q8TDD2 431 aaPredicted RBP13.25□□□□□ -0.29
ATXN3-210ENST00000507965 PITPNM1O00562 1244 aa13.24□□□□□ -0.29
ATXN3-210ENST00000507965 FBLN2P98095 1184 aa13.19□□□□□ -0.3
ATXN3-210ENST00000507965 FXR2P51116 673 aaKnown RBP eCLIP13.15□□□□□ -0.3
ATXN3-210ENST00000507965 SPDYE2BA6NHP3 402 aa13.14□□□□□ -0.31
ATXN3-210ENST00000507965 HAX1O00165 279 aa13.14□□□□□ -0.31
ATXN3-210ENST00000507965 SPDYE6P0CI01 402 aa13.14□□□□□ -0.31
ATXN3-210ENST00000507965 SPDYE2Q495Y8 402 aa13.14□□□□□ -0.31
ATXN3-210ENST00000507965 CLEC11AQ9Y240 323 aa12.99□□□□□ -0.33
ATXN3-210ENST00000507965 MKRN4PQ13434 485 aaPredicted RBP12.97□□□□□ -0.33
ATXN3-210ENST00000507965 SPDYE1Q8NFV5 336 aaPredicted RBP12.97□□□□□ -0.33
ATXN3-210ENST00000507965 ZNF692Q9BU19 519 aaPredicted RBP12.97□□□□□ -0.33
ATXN3-210ENST00000507965 PRKAR2AP13861 404 aaKnown RBP12.92□□□□□ -0.34
ATXN3-210ENST00000507965 SSUH2Q9Y2M2 353 aa12.9□□□□□ -0.34
ATXN3-210ENST00000507965 EVX2Q03828 476 aa12.88□□□□□ -0.35
ATXN3-210ENST00000507965 CCDC180Q9P1Z9 1646 aa12.83□□□□□ -0.36
ATXN3-210ENST00000507965 ABCC9O60706 1549 aa12.81□□□□□ -0.36
ATXN3-210ENST00000507965 PABPN1Q86U42 306 aaKnown RBP eCLIP12.76□□□□□ -0.37
ATXN3-210ENST00000507965 C19orf67A6NJJ6 358 aa12.74□□□□□ -0.37
ATXN3-210ENST00000507965 PRR29P0C7W0 189 aa12.74□□□□□ -0.37
ATXN3-210ENST00000507965 CHADLQ6NUI6 762 aa12.73□□□□□ -0.37
ATXN3-210ENST00000507965 GABBR2O75899 941 aa12.62□□□□□ -0.39
ATXN3-210ENST00000507965 CSRNP3Q8WYN3 585 aa12.6□□□□□ -0.39
ATXN3-210ENST00000507965 FARP1Q9Y4F1 1045 aaPredicted RBP12.51□□□□□ -0.41
ATXN3-210ENST00000507965 CD44P16070 742 aaKnown RBP12.5□□□□□ -0.41
ATXN3-210ENST00000507965 LHX8Q68G74 356 aa12.43□□□□□ -0.42
ATXN3-210ENST00000507965 EHMT2Q96KQ7 1210 aa12.39□□□□□ -0.43
ATXN3-210ENST00000507965 STAG3Q9UJ98 1225 aa12.39□□□□□ -0.43
ATXN3-210ENST00000507965 CLCN6P51797 869 aa12.38□□□□□ -0.43
ATXN3-210ENST00000507965 SPDYE4A6NLX3 237 aa12.32□□□□□ -0.44
ATXN3-210ENST00000507965 POTEIP0CG38 1075 aa12.31□□□□□ -0.44
ATXN3-210ENST00000507965 CREBZFQ9NS37 354 aa12.31□□□□□ -0.44
ATXN3-210ENST00000507965 ZRANB1Q9UGI0 708 aa12.3□□□□□ -0.44
ATXN3-210ENST00000507965 DCBLD2Q96PD2 775 aa12.29□□□□□ -0.44
ATXN3-210ENST00000507965 ZNF579Q8NAF0 562 aaKnown RBP12.27□□□□□ -0.45
ATXN3-210ENST00000507965 PAK3O75914 559 aaPredicted RBP12.2□□□□□ -0.46
ATXN3-210ENST00000507965 RB1CC1Q8TDY2 1594 aa12.17□□□□□ -0.46
ATXN3-210ENST00000507965 NPM1P06748 294 aaKnown RBP eCLIP12.15□□□□□ -0.46
ATXN3-210ENST00000507965 GALR2O43603 387 aaPredicted RBP12.14□□□□□ -0.47
ATXN3-210ENST00000507965 PHF12Q96QT6 1004 aa12.09□□□□□ -0.47
ATXN3-210ENST00000507965 UNC13AQ9UPW8 1703 aa12.07□□□□□ -0.48
ATXN3-210ENST00000507965 NACADO15069 1562 aa12.05□□□□□ -0.48
ATXN3-210ENST00000507965 MNX1P50219 401 aaPredicted RBP12.04□□□□□ -0.48
ATXN3-210ENST00000507965 OTUD5Q96G74 571 aa11.92□□□□□ -0.5
ATXN3-210ENST00000507965 MS4A3Q96HJ5 214 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms