RNA–Protein interactions for RNA: ENST00000556644.5

ATXN3-242, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-242ENST00000556644 NISCHQ9Y2I1 1504 aa11.35□□□□□ -0.59
ATXN3-242ENST00000556644 ABCC9O60706 1549 aa11.16□□□□□ -0.62
ATXN3-242ENST00000556644 DNAJC5BQ9UF47 199 aa11.03□□□□□ -0.64
ATXN3-242ENST00000556644 AEBP2Q6ZN18 517 aaPredicted RBP10.85□□□□□ -0.67
ATXN3-242ENST00000556644 DNAJC5Q9H3Z4 198 aa10.52□□□□□ -0.73
ATXN3-242ENST00000556644 CCDC180Q9P1Z9 1646 aa10.4□□□□□ -0.74
ATXN3-242ENST00000556644 PABPN1Q86U42 306 aaKnown RBP eCLIP10.32□□□□□ -0.76
ATXN3-242ENST00000556644 RB1CC1Q8TDY2 1594 aa10.24□□□□□ -0.77
ATXN3-242ENST00000556644 CHIC1Q5VXU3 224 aa10.13□□□□□ -0.79
ATXN3-242ENST00000556644 CECR2Q9BXF3 1484 aa10.08□□□□□ -0.8
ATXN3-242ENST00000556644 UNC13AQ9UPW8 1703 aa10.02□□□□□ -0.8
ATXN3-242ENST00000556644 BICRAQ9NZM4 1560 aa10.01□□□□□ -0.81
ATXN3-242ENST00000556644 CC2D2AQ9P2K1 1620 aa10□□□□□ -0.81
ATXN3-242ENST00000556644 NACADO15069 1562 aa9.99□□□□□ -0.81
ATXN3-242ENST00000556644 DCAF8L2P0C7V8 631 aa9.96□□□□□ -0.82
ATXN3-242ENST00000556644 TRIM41Q8WV44 630 aa9.91□□□□□ -0.82
ATXN3-242ENST00000556644 EIF4G1Q04637 1599 aaKnown RBP9.8□□□□□ -0.84
ATXN3-242ENST00000556644 CUX2O14529 1486 aa9.78□□□□□ -0.84
ATXN3-242ENST00000556644 SHROOM4Q9ULL8 1493 aa9.69□□□□□ -0.86
ATXN3-242ENST00000556644 ERCC6Q03468 1493 aa9.66□□□□□ -0.86
ATXN3-242ENST00000556644 POTEDQ86YR6 584 aa9.6□□□□□ -0.87
ATXN3-242ENST00000556644 MYO15BQ96JP2 1530 aa9.58□□□□□ -0.88
ATXN3-242ENST00000556644 SCRIBQ14160 1630 aa9.57□□□□□ -0.88
ATXN3-242ENST00000556644 NESP48681 1621 aa9.42□□□□□ -0.9
ATXN3-242ENST00000556644 THOC2Q8NI27 1593 aaKnown RBP9.38□□□□□ -0.91
ATXN3-242ENST00000556644 SENP3Q9H4L4 574 aaPredicted RBP9.36□□□□□ -0.91
ATXN3-242ENST00000556644 SMARCA2P51531 1590 aa9.34□□□□□ -0.91
ATXN3-242ENST00000556644 ZCCHC6Q5VYS8 1495 aaKnown RBP9.28□□□□□ -0.92
ATXN3-242ENST00000556644 BAZ1AQ9NRL2 1556 aaPredicted RBP9.27□□□□□ -0.93
ATXN3-242ENST00000556644 TRHP20396 242 aaPredicted RBP9.26□□□□□ -0.93
ATXN3-242ENST00000556644 DCAF1Q9Y4B6 1507 aa9.26□□□□□ -0.93
ATXN3-242ENST00000556644 NCAPD3P42695 1498 aa9.24□□□□□ -0.93
ATXN3-242ENST00000556644 OSCARQ8IYS5 282 aa9.24□□□□□ -0.93
ATXN3-242ENST00000556644 RIMBP3CA6NJZ7 1639 aa9.23□□□□□ -0.93
ATXN3-242ENST00000556644 RIMBP3BA6NNM3 1639 aa9.23□□□□□ -0.93
ATXN3-242ENST00000556644 RIMBP3Q9UFD9 1639 aa9.23□□□□□ -0.93
ATXN3-242ENST00000556644 KIF21AQ7Z4S6 1674 aa9.23□□□□□ -0.93
ATXN3-242ENST00000556644 ATAD2BQ9ULI0 1458 aa9.17□□□□□ -0.94
ATXN3-242ENST00000556644 ILDR1Q86SU0 546 aaPredicted RBP9.17□□□□□ -0.94
ATXN3-242ENST00000556644 PHF23Q9BUL5 403 aaPredicted RBP9.14□□□□□ -0.95
ATXN3-242ENST00000556644 ARHGEF11O15085 1522 aa9.14□□□□□ -0.95
ATXN3-242ENST00000556644 LAMC3Q9Y6N6 1575 aa9.13□□□□□ -0.95
ATXN3-242ENST00000556644 CYB5RLQ6IPT4 315 aa9.13□□□□□ -0.95
ATXN3-242ENST00000556644 HMGXB3Q12766 1538 aa9.12□□□□□ -0.95
ATXN3-242ENST00000556644 PDS5BQ9NTI5 1447 aa9.12□□□□□ -0.95
ATXN3-242ENST00000556644 MRC2Q9UBG0 1479 aa9.11□□□□□ -0.95
ATXN3-242ENST00000556644 WDR62O43379 1518 aa9.1□□□□□ -0.95
ATXN3-242ENST00000556644 BAZ1BQ9UIG0 1483 aaKnown RBP9.06□□□□□ -0.96
ATXN3-242ENST00000556644 ARAP1Q96P48 1450 aa9.02□□□□□ -0.96
ATXN3-242ENST00000556644 SMARCA4P51532 1647 aa9□□□□□ -0.97
ATXN3-242ENST00000556644 CADPSQ9ULU8 1353 aa8.96□□□□□ -0.98
ATXN3-242ENST00000556644 CEP164Q9UPV0 1460 aa8.95□□□□□ -0.98
ATXN3-242ENST00000556644 ZNF608Q9ULD9 1512 aaPredicted RBP8.9□□□□□ -0.99
ATXN3-242ENST00000556644 FANCD2Q9BXW9 1451 aa8.89□□□□□ -0.99
ATXN3-242ENST00000556644 URB2Q14146 1524 aaKnown RBP8.88□□□□□ -0.99
ATXN3-242ENST00000556644 PEG3Q9GZU2 1588 aa8.86□□□□□ -0.99
ATXN3-242ENST00000556644 CHD1O14646 1710 aa8.83□□□□□ -1
ATXN3-242ENST00000556644 RSF1Q96T23 1441 aaPredicted RBP8.82□□□□□ -1
ATXN3-242ENST00000556644 FBLN2P98095 1184 aa8.82□□□□□ -1
ATXN3-242ENST00000556644 FOXD1Q16676 465 aa8.82□□□□□ -1
ATXN3-242ENST00000556644 EIF4G3O43432 1585 aaKnown RBP8.78□□□□□ -1
ATXN3-242ENST00000556644 MROH2BQ7Z745 1585 aa8.78□□□□□ -1
ATXN3-242ENST00000556644 IFT140Q96RY7 1462 aa8.77□□□□□ -1
ATXN3-242ENST00000556644 KDM4FA0A1W2PPD8 638 aa8.77□□□□□ -1.01
ATXN3-242ENST00000556644 AQRO60306 1485 aaKnown RBP eCLIP8.72□□□□□ -1.01
ATXN3-242ENST00000556644 CFTRP13569 1480 aa8.71□□□□□ -1.01
ATXN3-242ENST00000556644 CLASP1Q7Z460 1538 aa8.7□□□□□ -1.02
ATXN3-242ENST00000556644 GAPVD1Q14C86 1478 aa8.68□□□□□ -1.02
ATXN3-242ENST00000556644 LMTK3Q96Q04 1460 aa8.66□□□□□ -1.02
ATXN3-242ENST00000556644 FBXO41Q8TF61 875 aa8.65□□□□□ -1.02
ATXN3-242ENST00000556644 WIZO95785 1651 aa8.65□□□□□ -1.03
ATXN3-242ENST00000556644 HECW2Q9P2P5 1572 aa8.65□□□□□ -1.03
ATXN3-242ENST00000556644 TOPBP1Q92547 1522 aa8.64□□□□□ -1.03
ATXN3-242ENST00000556644 ERCC6L2Q5T890 1561 aa8.64□□□□□ -1.03
ATXN3-242ENST00000556644 KIF13AQ9H1H9 1805 aa8.62□□□□□ -1.03
ATXN3-242ENST00000556644 SYNJ1O43426 1573 aa8.61□□□□□ -1.03
ATXN3-242ENST00000556644 SNAPC4Q5SXM2 1469 aa8.61□□□□□ -1.03
ATXN3-242ENST00000556644 ILDR2Q71H61 639 aa8.6□□□□□ -1.03
ATXN3-242ENST00000556644 CHMP7Q8WUX9 453 aaPredicted RBP8.6□□□□□ -1.03
ATXN3-242ENST00000556644 TARBP1Q13395 1621 aaKnown RBP8.6□□□□□ -1.03
ATXN3-242ENST00000556644 SOCS7O14512 581 aa8.58□□□□□ -1.04
ATXN3-242ENST00000556644 TDRD9Q8NDG6 1382 aaKnown RBP8.58□□□□□ -1.04
ATXN3-242ENST00000556644 ADGRL1O94910 1474 aa8.57□□□□□ -1.04
ATXN3-242ENST00000556644 KDM6BO15054 1643 aa8.56□□□□□ -1.04
ATXN3-242ENST00000556644 FAM69CQ0P6D2 419 aa8.55□□□□□ -1.04
ATXN3-242ENST00000556644 RAD54L2Q9Y4B4 1467 aa8.55□□□□□ -1.04
ATXN3-242ENST00000556644 DNMBPQ6XZF7 1577 aa8.54□□□□□ -1.04
ATXN3-242ENST00000556644 SYNJ2O15056 1496 aa8.54□□□□□ -1.04
ATXN3-242ENST00000556644 PRDM2Q13029 1718 aa8.54□□□□□ -1.04
ATXN3-242ENST00000556644 MSH5O43196 834 aa8.53□□□□□ -1.04
ATXN3-242ENST00000556644 POLA1P09884 1462 aaPredicted RBP8.52□□□□□ -1.05
ATXN3-242ENST00000556644 DISP3Q9P2K9 1392 aa8.5□□□□□ -1.05
ATXN3-242ENST00000556644 MAGI1Q96QZ7 1491 aaPredicted RBP8.5□□□□□ -1.05
ATXN3-242ENST00000556644 ABCC8Q09428 1581 aa8.49□□□□□ -1.05
ATXN3-242ENST00000556644 ABCC10Q5T3U5 1492 aa8.48□□□□□ -1.05
ATXN3-242ENST00000556644 TSPOAP1O95153 1857 aa8.47□□□□□ -1.05
ATXN3-242ENST00000556644 SOGA1O94964 1423 aa8.46□□□□□ -1.05
ATXN3-242ENST00000556644 TOP2AP11388 1531 aaKnown RBP8.46□□□□□ -1.05
ATXN3-242ENST00000556644 DIP2BQ9P265 1576 aa8.46□□□□□ -1.06
ATXN3-242ENST00000556644 CEP170Q5SW79 1584 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 373.8 ms