RNA–Protein interactions for RNA: ENST00000454964.3

ATXN3-205, Transcript of ataxin 3, humanhuman

TSL 2

Gene ATXN3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-205ENST00000454964 NISCHQ9Y2I1 1504 aa22.4■■□□□ 1.18
ATXN3-205ENST00000454964 AEBP2Q6ZN18 517 aaPredicted RBP19.92■□□□□ 0.78
ATXN3-205ENST00000454964 CCDC180Q9P1Z9 1646 aa19.9■□□□□ 0.78
ATXN3-205ENST00000454964 CHIC1Q5VXU3 224 aa19.52■□□□□ 0.72
ATXN3-205ENST00000454964 ABCC9O60706 1549 aa19.1■□□□□ 0.65
ATXN3-205ENST00000454964 MYO15BQ96JP2 1530 aa18.69■□□□□ 0.58
ATXN3-205ENST00000454964 NACADO15069 1562 aa18.68■□□□□ 0.58
ATXN3-205ENST00000454964 ZCCHC6Q5VYS8 1495 aaKnown RBP18.65■□□□□ 0.58
ATXN3-205ENST00000454964 DCAF8L2P0C7V8 631 aa18.65■□□□□ 0.58
ATXN3-205ENST00000454964 DCAF1Q9Y4B6 1507 aa18.64■□□□□ 0.58
ATXN3-205ENST00000454964 RB1CC1Q8TDY2 1594 aa18.64■□□□□ 0.57
ATXN3-205ENST00000454964 UNC13AQ9UPW8 1703 aa18.09■□□□□ 0.49
ATXN3-205ENST00000454964 SCRIBQ14160 1630 aa18■□□□□ 0.47
ATXN3-205ENST00000454964 SHROOM4Q9ULL8 1493 aa17.98■□□□□ 0.47
ATXN3-205ENST00000454964 BICRAQ9NZM4 1560 aa17.89■□□□□ 0.45
ATXN3-205ENST00000454964 PABPN1Q86U42 306 aaKnown RBP eCLIP17.87■□□□□ 0.45
ATXN3-205ENST00000454964 EIF4G1Q04637 1599 aaKnown RBP17.47■□□□□ 0.39
ATXN3-205ENST00000454964 BAZ1AQ9NRL2 1556 aaPredicted RBP17.4■□□□□ 0.38
ATXN3-205ENST00000454964 CC2D2AQ9P2K1 1620 aa17.34■□□□□ 0.37
ATXN3-205ENST00000454964 SMARCA4P51532 1647 aa17.31■□□□□ 0.36
ATXN3-205ENST00000454964 CECR2Q9BXF3 1484 aa17.29■□□□□ 0.36
ATXN3-205ENST00000454964 DNAJC5BQ9UF47 199 aa17.27■□□□□ 0.36
ATXN3-205ENST00000454964 SMARCA2P51531 1590 aa17.26■□□□□ 0.35
ATXN3-205ENST00000454964 PHF23Q9BUL5 403 aaPredicted RBP17.21■□□□□ 0.35
ATXN3-205ENST00000454964 PEG3Q9GZU2 1588 aa17.2■□□□□ 0.34
ATXN3-205ENST00000454964 NCAPD3P42695 1498 aa17.2■□□□□ 0.34
ATXN3-205ENST00000454964 ATAD2BQ9ULI0 1458 aa17.18■□□□□ 0.34
ATXN3-205ENST00000454964 MROH2BQ7Z745 1585 aa17.17■□□□□ 0.34
ATXN3-205ENST00000454964 HMGXB3Q12766 1538 aa17.12■□□□□ 0.33
ATXN3-205ENST00000454964 RSF1Q96T23 1441 aaPredicted RBP17.1■□□□□ 0.33
ATXN3-205ENST00000454964 BAZ1BQ9UIG0 1483 aaKnown RBP17.08■□□□□ 0.32
ATXN3-205ENST00000454964 WIZO95785 1651 aa17.01■□□□□ 0.31
ATXN3-205ENST00000454964 TOP2AP11388 1531 aaKnown RBP16.91■□□□□ 0.3
ATXN3-205ENST00000454964 SUPT5HO00267 1087 aaKnown RBP16.83■□□□□ 0.28
ATXN3-205ENST00000454964 SENP3Q9H4L4 574 aaPredicted RBP16.82■□□□□ 0.28
ATXN3-205ENST00000454964 LAMC3Q9Y6N6 1575 aa16.74■□□□□ 0.27
ATXN3-205ENST00000454964 CADPSQ9ULU8 1353 aa16.71■□□□□ 0.27
ATXN3-205ENST00000454964 CCDC88BA6NC98 1476 aa16.68■□□□□ 0.26
ATXN3-205ENST00000454964 PDS5BQ9NTI5 1447 aa16.66■□□□□ 0.26
ATXN3-205ENST00000454964 CFTRP13569 1480 aa16.62■□□□□ 0.25
ATXN3-205ENST00000454964 PRDM2Q13029 1718 aa16.57■□□□□ 0.24
ATXN3-205ENST00000454964 ERCC6Q03468 1493 aa16.56■□□□□ 0.24
ATXN3-205ENST00000454964 NESP48681 1621 aa16.53■□□□□ 0.24
ATXN3-205ENST00000454964 FANCD2Q9BXW9 1451 aa16.47■□□□□ 0.23
ATXN3-205ENST00000454964 CEP164Q9UPV0 1460 aa16.46■□□□□ 0.23
ATXN3-205ENST00000454964 ABCC8Q09428 1581 aa16.43■□□□□ 0.22
ATXN3-205ENST00000454964 KIF21AQ7Z4S6 1674 aa16.42■□□□□ 0.22
ATXN3-205ENST00000454964 MRC2Q9UBG0 1479 aa16.37■□□□□ 0.21
ATXN3-205ENST00000454964 CUX2O14529 1486 aa16.35■□□□□ 0.21
ATXN3-205ENST00000454964 THOC2Q8NI27 1593 aaKnown RBP16.3■□□□□ 0.2
ATXN3-205ENST00000454964 WDR62O43379 1518 aa16.29■□□□□ 0.2
ATXN3-205ENST00000454964 DNMBPQ6XZF7 1577 aa16.24■□□□□ 0.19
ATXN3-205ENST00000454964 URB2Q14146 1524 aaKnown RBP16.21■□□□□ 0.19
ATXN3-205ENST00000454964 TOPBP1Q92547 1522 aa16.2■□□□□ 0.18
ATXN3-205ENST00000454964 WRNQ14191 1432 aaPredicted RBP eCLIP16.18■□□□□ 0.18
ATXN3-205ENST00000454964 IFT140Q96RY7 1462 aa16.13■□□□□ 0.17
ATXN3-205ENST00000454964 TOP2BQ02880 1626 aa16.11■□□□□ 0.17
ATXN3-205ENST00000454964 CUX1P39880 1505 aa16.1■□□□□ 0.17
ATXN3-205ENST00000454964 BIVM-ERCC5R4GMW8 1640 aa16.1■□□□□ 0.17
ATXN3-205ENST00000454964 SOGA1O94964 1423 aa16.09■□□□□ 0.17
ATXN3-205ENST00000454964 WDR97A6NE52 1622 aa16.07■□□□□ 0.16
ATXN3-205ENST00000454964 POLA1P09884 1462 aaPredicted RBP16.06■□□□□ 0.16
ATXN3-205ENST00000454964 FGD5Q6ZNL6 1462 aa16.05■□□□□ 0.16
ATXN3-205ENST00000454964 TRIM41Q8WV44 630 aa16.01■□□□□ 0.15
ATXN3-205ENST00000454964 TARBP1Q13395 1621 aaKnown RBP16■□□□□ 0.15
ATXN3-205ENST00000454964 SYNJ1O43426 1573 aa16■□□□□ 0.15
ATXN3-205ENST00000454964 ABCA10Q8WWZ4 1543 aa15.98■□□□□ 0.15
ATXN3-205ENST00000454964 RAD54L2Q9Y4B4 1467 aa15.93■□□□□ 0.14
ATXN3-205ENST00000454964 GAPVD1Q14C86 1478 aa15.89■□□□□ 0.13
ATXN3-205ENST00000454964 TDRD9Q8NDG6 1382 aaKnown RBP15.88■□□□□ 0.13
ATXN3-205ENST00000454964 KIF27Q86VH2 1401 aa15.88■□□□□ 0.13
ATXN3-205ENST00000454964 EIF4G3O43432 1585 aaKnown RBP15.87■□□□□ 0.13
ATXN3-205ENST00000454964 AQRO60306 1485 aaKnown RBP eCLIP15.87■□□□□ 0.13
ATXN3-205ENST00000454964 GRIN2BQ13224 1484 aa15.87■□□□□ 0.13
ATXN3-205ENST00000454964 ZNF608Q9ULD9 1512 aaPredicted RBP15.87■□□□□ 0.13
ATXN3-205ENST00000454964 PLPPR3Q6T4P5 718 aa15.85■□□□□ 0.13
ATXN3-205ENST00000454964 MAGI1Q96QZ7 1491 aaPredicted RBP15.84■□□□□ 0.13
ATXN3-205ENST00000454964 ERICH3Q5RHP9 1530 aa15.83■□□□□ 0.12
ATXN3-205ENST00000454964 ABCA5Q8WWZ7 1642 aa15.83■□□□□ 0.12
ATXN3-205ENST00000454964 PBRM1Q86U86 1689 aa15.8■□□□□ 0.12
ATXN3-205ENST00000454964 EEA1Q15075 1411 aa15.8■□□□□ 0.12
ATXN3-205ENST00000454964 CHMP7Q8WUX9 453 aaPredicted RBP15.78■□□□□ 0.12
ATXN3-205ENST00000454964 OSCARQ8IYS5 282 aa15.77■□□□□ 0.12
ATXN3-205ENST00000454964 SYNJ2O15056 1496 aa15.74■□□□□ 0.11
ATXN3-205ENST00000454964 FHAD1B1AJZ9 1412 aa15.74■□□□□ 0.11
ATXN3-205ENST00000454964 CUL7Q14999 1698 aa15.73■□□□□ 0.11
ATXN3-205ENST00000454964 IGF1RP08069 1367 aa15.73■□□□□ 0.11
ATXN3-205ENST00000454964 SNAPC4Q5SXM2 1469 aa15.72■□□□□ 0.11
ATXN3-205ENST00000454964 FBLN2P98095 1184 aa15.72■□□□□ 0.11
ATXN3-205ENST00000454964 CSRNP3Q8WYN3 585 aa15.68■□□□□ 0.1
ATXN3-205ENST00000454964 CARMIL1Q5VZK9 1371 aa15.67■□□□□ 0.1
ATXN3-205ENST00000454964 ADAMTS12P58397 1594 aa15.66■□□□□ 0.1
ATXN3-205ENST00000454964 CHD1O14646 1710 aa15.65■□□□□ 0.1
ATXN3-205ENST00000454964 FOXD1Q16676 465 aa15.64■□□□□ 0.09
ATXN3-205ENST00000454964 GRIN2AQ12879 1464 aa15.63■□□□□ 0.09
ATXN3-205ENST00000454964 RAPGEF2Q9Y4G8 1499 aa15.61■□□□□ 0.09
ATXN3-205ENST00000454964 DNAJC5Q9H3Z4 198 aa15.59■□□□□ 0.09
ATXN3-205ENST00000454964 RUSC2Q8N2Y8 1516 aa15.57■□□□□ 0.08
ATXN3-205ENST00000454964 PRXQ9BXM0 1461 aa15.55■□□□□ 0.08
ATXN3-205ENST00000454964 NUP160Q12769 1436 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms