RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 PELP1Q8IZL8 1130 aaKnown RBP6.18□□□□□ -1.42
ATXN3-248ENST00000558190 MYT1Q01538 1121 aa6.13□□□□□ -1.43
ATXN3-248ENST00000558190 DCAF8L2P0C7V8 631 aa5.99□□□□□ -1.45
ATXN3-248ENST00000558190 PCGF6Q9BYE7 350 aa5.98□□□□□ -1.45
ATXN3-248ENST00000558190 SUPT5HO00267 1087 aaKnown RBP5.88□□□□□ -1.47
ATXN3-248ENST00000558190 EHMT2Q96KQ7 1210 aa5.81□□□□□ -1.48
ATXN3-248ENST00000558190 CENPBP07199 599 aaPredicted RBP5.81□□□□□ -1.48
ATXN3-248ENST00000558190 ZEB1P37275 1124 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-248ENST00000558190 ERICH6Q7L0X2 663 aa5.75□□□□□ -1.49
ATXN3-248ENST00000558190 HRCP23327 699 aa5.74□□□□□ -1.49
ATXN3-248ENST00000558190 CCER1Q8TC90 406 aaPredicted RBP5.74□□□□□ -1.49
ATXN3-248ENST00000558190 PPARGC1BQ86YN6 1023 aaKnown RBP5.71□□□□□ -1.49
ATXN3-248ENST00000558190 YTHDC1Q96MU7 727 aaKnown RBP5.71□□□□□ -1.49
ATXN3-248ENST00000558190 FAM9AQ8IZU1 332 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-248ENST00000558190 GTF3C3Q9Y5Q9 886 aa5.59□□□□□ -1.51
ATXN3-248ENST00000558190 LOC105371045A0A1W2PR82 267 aa5.57□□□□□ -1.52
ATXN3-248ENST00000558190 NEFLP07196 543 aa5.56□□□□□ -1.52
ATXN3-248ENST00000558190 TTBK1Q5TCY1 1321 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-248ENST00000558190 DAXXQ9UER7 740 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-248ENST00000558190 APLP2Q06481 763 aa5.54□□□□□ -1.52
ATXN3-248ENST00000558190 TRIM26Q12899 539 aaPredicted RBP5.51□□□□□ -1.53
ATXN3-248ENST00000558190 EIF5BO60841 1220 aaKnown RBP5.49□□□□□ -1.53
ATXN3-248ENST00000558190 DIEXFQ68CQ4 756 aaKnown RBP5.48□□□□□ -1.53
ATXN3-248ENST00000558190 ACIN1Q9UKV3 1341 aaKnown RBP5.48□□□□□ -1.53
ATXN3-248ENST00000558190 CDK11AQ9UQ88 783 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-248ENST00000558190 BCANQ96GW7 911 aa5.43□□□□□ -1.54
ATXN3-248ENST00000558190 RANGAP1P46060 587 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-248ENST00000558190 SCAF1Q9H7N4 1312 aaKnown RBP5.4□□□□□ -1.55
ATXN3-248ENST00000558190 RTL5Q5HYW3 569 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-248ENST00000558190 NEUROD1Q13562 356 aa5.37□□□□□ -1.55
ATXN3-248ENST00000558190 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-248ENST00000558190 CNGB1Q14028 1251 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-248ENST00000558190 TRIM41Q8WV44 630 aa5.34□□□□□ -1.56
ATXN3-248ENST00000558190 ATP1B4Q9UN42 357 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-248ENST00000558190 UBTFP17480 764 aaKnown RBP5.32□□□□□ -1.56
ATXN3-248ENST00000558190 ZNF316A6NFI3 1004 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-248ENST00000558190 HNRNPUL2Q1KMD3 747 aaKnown RBP5.32□□□□□ -1.56
ATXN3-248ENST00000558190 ANP32EQ9BTT0 268 aa5.31□□□□□ -1.56
ATXN3-248ENST00000558190 CLSPNQ9HAW4 1339 aa5.29□□□□□ -1.56
ATXN3-248ENST00000558190 BCL11AQ9H165 835 aa5.29□□□□□ -1.56
ATXN3-248ENST00000558190 SHROOM4Q9ULL8 1493 aa5.29□□□□□ -1.56
ATXN3-248ENST00000558190 ZBTB47Q9UFB7 747 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-248ENST00000558190 POLR3GLQ9BT43 218 aa5.27□□□□□ -1.57
ATXN3-248ENST00000558190 GLIPR1L2Q4G1C9 344 aa5.26□□□□□ -1.57
ATXN3-248ENST00000558190 MIER1Q8N108 512 aa5.26□□□□□ -1.57
ATXN3-248ENST00000558190 FKBP8Q14318 412 aa5.26□□□□□ -1.57
ATXN3-248ENST00000558190 CHIC1Q5VXU3 224 aa5.26□□□□□ -1.57
ATXN3-248ENST00000558190 NBR1Q14596 966 aa5.25□□□□□ -1.57
ATXN3-248ENST00000558190 ITGAEP38570 1179 aa5.25□□□□□ -1.57
ATXN3-248ENST00000558190 MYT1LQ9UL68 1186 aa5.22□□□□□ -1.57
ATXN3-248ENST00000558190 NPM2Q86SE8 214 aaKnown RBP5.21□□□□□ -1.58
ATXN3-248ENST00000558190 CSRNP3Q8WYN3 585 aa5.19□□□□□ -1.58
ATXN3-248ENST00000558190 RTN4Q9NQC3 1192 aaKnown RBP5.17□□□□□ -1.58
ATXN3-248ENST00000558190 DEKP35659 375 aaKnown RBP5.17□□□□□ -1.58
ATXN3-248ENST00000558190 ANP32CO43423 234 aa5.17□□□□□ -1.58
ATXN3-248ENST00000558190 ANP32AP39687 249 aaKnown RBP5.15□□□□□ -1.59
ATXN3-248ENST00000558190 DDX10Q13206 875 aaKnown RBP5.15□□□□□ -1.59
ATXN3-248ENST00000558190 RBM19Q9Y4C8 960 aaKnown RBP5.12□□□□□ -1.59
ATXN3-248ENST00000558190 ERICH6BQ5W0A0 696 aa5.12□□□□□ -1.59
ATXN3-248ENST00000558190 TNNT2P45379 298 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-248ENST00000558190 ANP32BQ92688 251 aaKnown RBP5.12□□□□□ -1.59
ATXN3-248ENST00000558190 IRX6P78412 446 aaPredicted RBP5.1□□□□□ -1.59
ATXN3-248ENST00000558190 SUPT16HQ9Y5B9 1047 aaKnown RBP5.08□□□□□ -1.6
ATXN3-248ENST00000558190 ANO8Q9HCE9 1232 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-248ENST00000558190 NAP1L5Q96NT1 182 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-248ENST00000558190 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-248ENST00000558190 CCDC136Q96JN2 1154 aa5.06□□□□□ -1.6
ATXN3-248ENST00000558190 TRIM52Q96A61 297 aa5.05□□□□□ -1.6
ATXN3-248ENST00000558190 SALL2Q9Y467 1007 aaPredicted RBP5.05□□□□□ -1.6
ATXN3-248ENST00000558190 SLC4A1APQ9BWU0 796 aaKnown RBP5.05□□□□□ -1.6
ATXN3-248ENST00000558190 VSIG10Q8N0Z9 540 aa5.05□□□□□ -1.6
ATXN3-248ENST00000558190 HSP90AA1P07900 732 aaKnown RBP5.04□□□□□ -1.6
ATXN3-248ENST00000558190 TSHZ2Q9NRE2 1034 aa5.04□□□□□ -1.6
ATXN3-248ENST00000558190 FAM9BQ8IZU0 186 aa5.04□□□□□ -1.6
ATXN3-248ENST00000558190 ARXQ96QS3 562 aa5.03□□□□□ -1.6
ATXN3-248ENST00000558190 LAS1LQ9Y4W2 734 aaKnown RBP5.03□□□□□ -1.6
ATXN3-248ENST00000558190 NCLP19338 710 aaKnown RBP5.02□□□□□ -1.61
ATXN3-248ENST00000558190 NEFMP07197 916 aa5.02□□□□□ -1.61
ATXN3-248ENST00000558190 PPM1GO15355 546 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-248ENST00000558190 PPP4R2Q9NY27 417 aa5.02□□□□□ -1.61
ATXN3-248ENST00000558190 HNRNPUQ00839 825 aaKnown RBP eCLIP5.01□□□□□ -1.61
ATXN3-248ENST00000558190 AMER1Q5JTC6 1135 aaPredicted RBP5□□□□□ -1.61
ATXN3-248ENST00000558190 HIRIP3Q9BW71 556 aaPredicted RBP4.99□□□□□ -1.61
ATXN3-248ENST00000558190 SENP3-EIF4A1A0A087X0R7 540 aa4.98□□□□□ -1.61
ATXN3-248ENST00000558190 NOP58Q9Y2X3 529 aaKnown RBP4.97□□□□□ -1.61
ATXN3-248ENST00000558190 FAM50AQ14320 339 aaKnown RBP4.97□□□□□ -1.61
ATXN3-248ENST00000558190 HSP90AA2PQ14568 343 aaPredicted RBP4.97□□□□□ -1.61
ATXN3-248ENST00000558190 TRIM44Q96DX7 344 aaPredicted RBP4.96□□□□□ -1.62
ATXN3-248ENST00000558190 B4GALNT3Q6L9W6 998 aa4.96□□□□□ -1.62
ATXN3-248ENST00000558190 DDRGK1Q96HY6 314 aa4.96□□□□□ -1.62
ATXN3-248ENST00000558190 RSPH6AQ9H0K4 717 aa4.96□□□□□ -1.62
ATXN3-248ENST00000558190 ZNF326Q5BKZ1 582 aaKnown RBP4.95□□□□□ -1.62
ATXN3-248ENST00000558190 TMC1Q8TDI8 760 aa4.94□□□□□ -1.62
ATXN3-248ENST00000558190 ARID4BQ4LE39 1312 aaPredicted RBP4.94□□□□□ -1.62
ATXN3-248ENST00000558190 UPF2Q9HAU5 1272 aaKnown RBP4.93□□□□□ -1.62
ATXN3-248ENST00000558190 BECN1Q14457 450 aa4.93□□□□□ -1.62
ATXN3-248ENST00000558190 TNNT3P45378 269 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-248ENST00000558190 TIMELESSQ9UNS1 1208 aa4.93□□□□□ -1.62
ATXN3-248ENST00000558190 PRKCSHP14314 528 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-248ENST00000558190 SPRYD3Q8NCJ5 442 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms