RNA–Protein interactions for RNA: ENST00000511562.5

TMA16-207, Transcript of translation machinery associated 16 homolog, humanhuman

TSL 2

Gene TMA16, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMA16-207ENST00000511562 NISCHQ9Y2I1 1504 aa33.01■■■□□ 2.87
TMA16-207ENST00000511562 CCDC180Q9P1Z9 1646 aa28.94■■■□□ 2.22
TMA16-207ENST00000511562 ABCC9O60706 1549 aa27.86■■■□□ 2.05
TMA16-207ENST00000511562 ZCCHC6Q5VYS8 1495 aaKnown RBP27.59■■■□□ 2.01
TMA16-207ENST00000511562 DCAF8L2P0C7V8 631 aa27.54■■■□□ 2
TMA16-207ENST00000511562 DCAF1Q9Y4B6 1507 aa27.31■■□□□ 1.96
TMA16-207ENST00000511562 MYO15BQ96JP2 1530 aa27.19■■□□□ 1.94
TMA16-207ENST00000511562 NACADO15069 1562 aa27.16■■□□□ 1.94
TMA16-207ENST00000511562 RB1CC1Q8TDY2 1594 aa27.02■■□□□ 1.92
TMA16-207ENST00000511562 SHROOM4Q9ULL8 1493 aa26.57■■□□□ 1.84
TMA16-207ENST00000511562 SCRIBQ14160 1630 aa26.54■■□□□ 1.84
TMA16-207ENST00000511562 UNC13AQ9UPW8 1703 aa26.25■■□□□ 1.79
TMA16-207ENST00000511562 PABPN1Q86U42 306 aaKnown RBP eCLIP26.25■■□□□ 1.79
TMA16-207ENST00000511562 BICRAQ9NZM4 1560 aa26.14■■□□□ 1.78
TMA16-207ENST00000511562 CECR2Q9BXF3 1484 aa25.66■■□□□ 1.7
TMA16-207ENST00000511562 BAZ1AQ9NRL2 1556 aaPredicted RBP25.52■■□□□ 1.68
TMA16-207ENST00000511562 MROH2BQ7Z745 1585 aa25.45■■□□□ 1.66
TMA16-207ENST00000511562 RSF1Q96T23 1441 aaPredicted RBP25.44■■□□□ 1.66
TMA16-207ENST00000511562 SMARCA4P51532 1647 aa25.42■■□□□ 1.66
TMA16-207ENST00000511562 EIF4G1Q04637 1599 aaKnown RBP25.42■■□□□ 1.66
TMA16-207ENST00000511562 SUPT5HO00267 1087 aaKnown RBP25.41■■□□□ 1.66
TMA16-207ENST00000511562 ATAD2BQ9ULI0 1458 aa25.2■■□□□ 1.62
TMA16-207ENST00000511562 SMARCA2P51531 1590 aa25.18■■□□□ 1.62
TMA16-207ENST00000511562 WIZO95785 1651 aa25.16■■□□□ 1.62
TMA16-207ENST00000511562 CC2D2AQ9P2K1 1620 aa25.15■■□□□ 1.62
TMA16-207ENST00000511562 PEG3Q9GZU2 1588 aa25.15■■□□□ 1.62
TMA16-207ENST00000511562 NCAPD3P42695 1498 aa25.09■■□□□ 1.61
TMA16-207ENST00000511562 DNAJC5BQ9UF47 199 aa25.06■■□□□ 1.6
TMA16-207ENST00000511562 BAZ1BQ9UIG0 1483 aaKnown RBP25.02■■□□□ 1.6
TMA16-207ENST00000511562 TOP2AP11388 1531 aaKnown RBP24.96■■□□□ 1.59
TMA16-207ENST00000511562 HMGXB3Q12766 1538 aa24.95■■□□□ 1.58
TMA16-207ENST00000511562 CCDC88BA6NC98 1476 aa24.73■■□□□ 1.55
TMA16-207ENST00000511562 CADPSQ9ULU8 1353 aa24.44■■□□□ 1.5
TMA16-207ENST00000511562 CFTRP13569 1480 aa24.38■■□□□ 1.49
TMA16-207ENST00000511562 LAMC3Q9Y6N6 1575 aa24.27■■□□□ 1.48
TMA16-207ENST00000511562 NESP48681 1621 aa24.27■■□□□ 1.48
TMA16-207ENST00000511562 PDS5BQ9NTI5 1447 aa24.18■■□□□ 1.46
TMA16-207ENST00000511562 FANCD2Q9BXW9 1451 aa24.12■■□□□ 1.45
TMA16-207ENST00000511562 CHIC1Q5VXU3 224 aa24.07■■□□□ 1.44
TMA16-207ENST00000511562 PRDM2Q13029 1718 aa24.04■■□□□ 1.44
TMA16-207ENST00000511562 CEP164Q9UPV0 1460 aa24.01■■□□□ 1.43
TMA16-207ENST00000511562 ERCC6Q03468 1493 aa23.99■■□□□ 1.43
TMA16-207ENST00000511562 WRNQ14191 1432 aaPredicted RBP eCLIP23.97■■□□□ 1.43
TMA16-207ENST00000511562 TRIM41Q8WV44 630 aa23.97■■□□□ 1.43
TMA16-207ENST00000511562 ABCC8Q09428 1581 aa23.95■■□□□ 1.43
TMA16-207ENST00000511562 KIF21AQ7Z4S6 1674 aa23.89■■□□□ 1.41
TMA16-207ENST00000511562 MRC2Q9UBG0 1479 aa23.84■■□□□ 1.41
TMA16-207ENST00000511562 CUX1P39880 1505 aa23.83■■□□□ 1.41
TMA16-207ENST00000511562 URB2Q14146 1524 aaKnown RBP23.8■■□□□ 1.4
TMA16-207ENST00000511562 SYNJ1O43426 1573 aa23.78■■□□□ 1.4
TMA16-207ENST00000511562 TOPBP1Q92547 1522 aa23.78■■□□□ 1.4
TMA16-207ENST00000511562 DNMBPQ6XZF7 1577 aa23.78■■□□□ 1.4
TMA16-207ENST00000511562 TOP2BQ02880 1626 aa23.77■■□□□ 1.4
TMA16-207ENST00000511562 BIVM-ERCC5R4GMW8 1640 aa23.71■■□□□ 1.39
TMA16-207ENST00000511562 WDR62O43379 1518 aa23.69■■□□□ 1.38
TMA16-207ENST00000511562 THOC2Q8NI27 1593 aaKnown RBP23.66■■□□□ 1.38
TMA16-207ENST00000511562 FGD5Q6ZNL6 1462 aa23.66■■□□□ 1.38
TMA16-207ENST00000511562 SOGA1O94964 1423 aa23.62■■□□□ 1.37
TMA16-207ENST00000511562 POLA1P09884 1462 aaPredicted RBP23.62■■□□□ 1.37
TMA16-207ENST00000511562 RAD54L2Q9Y4B4 1467 aa23.55■■□□□ 1.36
TMA16-207ENST00000511562 CUX2O14529 1486 aa23.52■■□□□ 1.36
TMA16-207ENST00000511562 IFT140Q96RY7 1462 aa23.5■■□□□ 1.35
TMA16-207ENST00000511562 FAM9AQ8IZU1 332 aaPredicted RBP23.47■■□□□ 1.35
TMA16-207ENST00000511562 ABCA10Q8WWZ4 1543 aa23.47■■□□□ 1.35
TMA16-207ENST00000511562 KIF27Q86VH2 1401 aa23.45■■□□□ 1.34
TMA16-207ENST00000511562 EEA1Q15075 1411 aa23.42■■□□□ 1.34
TMA16-207ENST00000511562 TDRD9Q8NDG6 1382 aaKnown RBP23.41■■□□□ 1.34
TMA16-207ENST00000511562 TARBP1Q13395 1621 aaKnown RBP23.41■■□□□ 1.34
TMA16-207ENST00000511562 RUSC2Q8N2Y8 1516 aa23.38■■□□□ 1.33
TMA16-207ENST00000511562 CSRNP3Q8WYN3 585 aa23.38■■□□□ 1.33
TMA16-207ENST00000511562 AQRO60306 1485 aaKnown RBP eCLIP23.32■■□□□ 1.328e-7■■■■■ 27.4
TMA16-207ENST00000511562 ZNF608Q9ULD9 1512 aaPredicted RBP23.32■■□□□ 1.32
TMA16-207ENST00000511562 GAPVD1Q14C86 1478 aa23.31■■□□□ 1.32
TMA16-207ENST00000511562 IGF1RP08069 1367 aa23.29■■□□□ 1.32
TMA16-207ENST00000511562 WDR97A6NE52 1622 aa23.29■■□□□ 1.32
TMA16-207ENST00000511562 ABCA5Q8WWZ7 1642 aa23.23■■□□□ 1.31
TMA16-207ENST00000511562 GRIN2BQ13224 1484 aa23.23■■□□□ 1.31
TMA16-207ENST00000511562 ERICH3Q5RHP9 1530 aa23.18■■□□□ 1.3
TMA16-207ENST00000511562 CARMIL1Q5VZK9 1371 aa23.17■■□□□ 1.3
TMA16-207ENST00000511562 EIF4G3O43432 1585 aaKnown RBP23.17■■□□□ 1.3
TMA16-207ENST00000511562 LOC105371045A0A1W2PR82 267 aa23.12■■□□□ 1.29
TMA16-207ENST00000511562 EHMT2Q96KQ7 1210 aa23.12■■□□□ 1.29
TMA16-207ENST00000511562 PRXQ9BXM0 1461 aa23.11■■□□□ 1.29
TMA16-207ENST00000511562 FHAD1B1AJZ9 1412 aa23.08■■□□□ 1.29
TMA16-207ENST00000511562 SNAPC4Q5SXM2 1469 aa23.07■■□□□ 1.28
TMA16-207ENST00000511562 MAGI1Q96QZ7 1491 aaPredicted RBP23.07■■□□□ 1.28
TMA16-207ENST00000511562 PBRM1Q86U86 1689 aa23.06■■□□□ 1.28
TMA16-207ENST00000511562 RAPGEF2Q9Y4G8 1499 aa23.06■■□□□ 1.28
TMA16-207ENST00000511562 CHMP7Q8WUX9 453 aaPredicted RBP23.05■■□□□ 1.28
TMA16-207ENST00000511562 CUL7Q14999 1698 aa23.04■■□□□ 1.28
TMA16-207ENST00000511562 UBTFP17480 764 aaKnown RBP23.04■■□□□ 1.28
TMA16-207ENST00000511562 KIF21BO75037 1637 aa23.02■■□□□ 1.28
TMA16-207ENST00000511562 FBLN2P98095 1184 aa23.02■■□□□ 1.28
TMA16-207ENST00000511562 GOLGA3Q08378 1498 aa23.02■■□□□ 1.28
TMA16-207ENST00000511562 SYNJ2O15056 1496 aa22.98■■□□□ 1.27
TMA16-207ENST00000511562 ADAMTS12P58397 1594 aa22.97■■□□□ 1.27
TMA16-207ENST00000511562 GRIN2AQ12879 1464 aa22.9■■□□□ 1.26
TMA16-207ENST00000511562 TNIKQ9UKE5 1360 aa22.89■■□□□ 1.26
TMA16-207ENST00000511562 NUP160Q12769 1436 aa22.76■■□□□ 1.23
TMA16-207ENST00000511562 RANGAP1P46060 587 aaPredicted RBP22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms