RNA–Protein interactions for RNA: ENST00000379803.5

SIN3B-202, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIN3B, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-202ENST00000379803 DCAF8L2P0C7V8 631 aa27.72■■■□□ 2.03
SIN3B-202ENST00000379803 NISCHQ9Y2I1 1504 aa27.43■■□□□ 1.98
SIN3B-202ENST00000379803 SUPT5HO00267 1087 aaKnown RBP25.54■■□□□ 1.68
SIN3B-202ENST00000379803 SHROOM4Q9ULL8 1493 aa25.15■■□□□ 1.62
SIN3B-202ENST00000379803 FAM9AQ8IZU1 332 aaPredicted RBP25.14■■□□□ 1.61
SIN3B-202ENST00000379803 APLP2Q06481 763 aa24.76■■□□□ 1.55
SIN3B-202ENST00000379803 EHMT2Q96KQ7 1210 aa24.54■■□□□ 1.52
SIN3B-202ENST00000379803 ATP1B4Q9UN42 357 aaPredicted RBP23.94■■□□□ 1.42
SIN3B-202ENST00000379803 TRIM41Q8WV44 630 aa23.88■■□□□ 1.41
SIN3B-202ENST00000379803 RANGAP1P46060 587 aaPredicted RBP23.85■■□□□ 1.41
SIN3B-202ENST00000379803 PELP1Q8IZL8 1130 aaKnown RBP23.75■■□□□ 1.39
SIN3B-202ENST00000379803 UBTFP17480 764 aaKnown RBP23.71■■□□□ 1.39
SIN3B-202ENST00000379803 TTBK1Q5TCY1 1321 aaPredicted RBP23.63■■□□□ 1.37
SIN3B-202ENST00000379803 MYT1LQ9UL68 1186 aa23.44■■□□□ 1.34
SIN3B-202ENST00000379803 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.37■■□□□ 1.33
SIN3B-202ENST00000379803 HNRNPUL2Q1KMD3 747 aaKnown RBP23.37■■□□□ 1.33
SIN3B-202ENST00000379803 ABCC9O60706 1549 aa23.3■■□□□ 1.32
SIN3B-202ENST00000379803 PCGF6Q9BYE7 350 aa23.26■■□□□ 1.31
SIN3B-202ENST00000379803 CCDC180Q9P1Z9 1646 aa23.18■■□□□ 1.3
SIN3B-202ENST00000379803 CCER1Q8TC90 406 aaPredicted RBP23.12■■□□□ 1.29
SIN3B-202ENST00000379803 PABPN1Q86U42 306 aaKnown RBP eCLIP23.1■■□□□ 1.292e-6■□□□□ 9.6
SIN3B-202ENST00000379803 ZEB1P37275 1124 aaPredicted RBP23.08■■□□□ 1.28
SIN3B-202ENST00000379803 ZCCHC6Q5VYS8 1495 aaKnown RBP22.91■■□□□ 1.26
SIN3B-202ENST00000379803 HRCP23327 699 aa22.91■■□□□ 1.26
SIN3B-202ENST00000379803 CENPBP07199 599 aaPredicted RBP22.73■■□□□ 1.23
SIN3B-202ENST00000379803 ITGAEP38570 1179 aa22.72■■□□□ 1.23
SIN3B-202ENST00000379803 FBLN2P98095 1184 aa22.69■■□□□ 1.22
SIN3B-202ENST00000379803 CHIC1Q5VXU3 224 aa22.66■■□□□ 1.22
SIN3B-202ENST00000379803 MYT1Q01538 1121 aa22.65■■□□□ 1.22
SIN3B-202ENST00000379803 NEFLP07196 543 aa22.6■■□□□ 1.21
SIN3B-202ENST00000379803 PPARGC1BQ86YN6 1023 aaKnown RBP22.54■■□□□ 1.2
SIN3B-202ENST00000379803 POLR3GLQ9BT43 218 aa22.54■■□□□ 1.2
SIN3B-202ENST00000379803 ERICH6Q7L0X2 663 aa22.5■■□□□ 1.19
SIN3B-202ENST00000379803 SLC4A1APQ9BWU0 796 aaKnown RBP22.45■■□□□ 1.18
SIN3B-202ENST00000379803 TRIM26Q12899 539 aaPredicted RBP22.38■■□□□ 1.17
SIN3B-202ENST00000379803 FAM50AQ14320 339 aaKnown RBP22.33■■□□□ 1.16
SIN3B-202ENST00000379803 NPM1P06748 294 aaKnown RBP eCLIP22.28■■□□□ 1.16
SIN3B-202ENST00000379803 TRIM52Q96A61 297 aa22.28■■□□□ 1.16
SIN3B-202ENST00000379803 SCRIBQ14160 1630 aa22.24■■□□□ 1.15
SIN3B-202ENST00000379803 ESF1Q9H501 851 aaKnown RBP22.23■■□□□ 1.15
SIN3B-202ENST00000379803 DCAF1Q9Y4B6 1507 aa22.23■■□□□ 1.15
SIN3B-202ENST00000379803 CDK11AQ9UQ88 783 aaPredicted RBP22.2■■□□□ 1.14
SIN3B-202ENST00000379803 LOC105371045A0A1W2PR82 267 aa22.16■■□□□ 1.14
SIN3B-202ENST00000379803 BCANQ96GW7 911 aa22.14■■□□□ 1.13
SIN3B-202ENST00000379803 YTHDC1Q96MU7 727 aaKnown RBP22.08■■□□□ 1.13
SIN3B-202ENST00000379803 NACADO15069 1562 aa22.07■■□□□ 1.12
SIN3B-202ENST00000379803 CNGB1Q14028 1251 aaPredicted RBP22.05■■□□□ 1.12
SIN3B-202ENST00000379803 RB1CC1Q8TDY2 1594 aa22.03■■□□□ 1.12
SIN3B-202ENST00000379803 DAXXQ9UER7 740 aaPredicted RBP21.99■■□□□ 1.11
SIN3B-202ENST00000379803 P3H3Q8IVL6 736 aa21.92■■□□□ 1.1
SIN3B-202ENST00000379803 CSRNP3Q8WYN3 585 aa21.91■■□□□ 1.1
SIN3B-202ENST00000379803 ZNF777Q9ULD5 760 aaPredicted RBP21.91■■□□□ 1.1
SIN3B-202ENST00000379803 ARID3CA6NKF2 412 aa21.9■■□□□ 1.1
SIN3B-202ENST00000379803 ZNF326Q5BKZ1 582 aaKnown RBP21.88■■□□□ 1.09
SIN3B-202ENST00000379803 STAG3Q9UJ98 1225 aa21.86■■□□□ 1.09
SIN3B-202ENST00000379803 NEFMP07197 916 aa21.85■■□□□ 1.09
SIN3B-202ENST00000379803 CHMP7Q8WUX9 453 aaPredicted RBP21.8■■□□□ 1.08
SIN3B-202ENST00000379803 NEUROD1Q13562 356 aa21.8■■□□□ 1.08
SIN3B-202ENST00000379803 MYO15BQ96JP2 1530 aa21.71■■□□□ 1.07
SIN3B-202ENST00000379803 ZBTB47Q9UFB7 747 aaPredicted RBP21.7■■□□□ 1.06
SIN3B-202ENST00000379803 SCAF1Q9H7N4 1312 aaKnown RBP21.7■■□□□ 1.06
SIN3B-202ENST00000379803 CLSPNQ9HAW4 1339 aa21.69■■□□□ 1.06
SIN3B-202ENST00000379803 SLC24A1O60721 1099 aa21.69■■□□□ 1.06
SIN3B-202ENST00000379803 PLPPR3Q6T4P5 718 aa21.68■■□□□ 1.06
SIN3B-202ENST00000379803 RSF1Q96T23 1441 aaPredicted RBP21.68■■□□□ 1.06
SIN3B-202ENST00000379803 CHGAP10645 457 aaKnown RBP21.65■■□□□ 1.06
SIN3B-202ENST00000379803 TSPY4P0CV99 314 aa21.55■■□□□ 1.04
SIN3B-202ENST00000379803 TSPY10P0CW01 314 aa21.55■■□□□ 1.04
SIN3B-202ENST00000379803 ANP32CO43423 234 aa21.5■■□□□ 1.03
SIN3B-202ENST00000379803 GTF3C3Q9Y5Q9 886 aa21.47■■□□□ 1.03
SIN3B-202ENST00000379803 ERCC6Q03468 1493 aa21.46■■□□□ 1.03
SIN3B-202ENST00000379803 BAZ1AQ9NRL2 1556 aaPredicted RBP21.46■■□□□ 1.03
SIN3B-202ENST00000379803 ACIN1Q9UKV3 1341 aaKnown RBP21.42■■□□□ 1.02
SIN3B-202ENST00000379803 CANXP27824 592 aaKnown RBP21.4■■□□□ 1.02
SIN3B-202ENST00000379803 ZNF316A6NFI3 1004 aaPredicted RBP21.38■■□□□ 1.01
SIN3B-202ENST00000379803 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.37■■□□□ 1.019e-7■■■□□ 19
SIN3B-202ENST00000379803 PLEKHD1A6NEE1 506 aa21.37■■□□□ 1.01
SIN3B-202ENST00000379803 MTUS2Q5JR59 1369 aa21.34■■□□□ 1.01
SIN3B-202ENST00000379803 DIEXFQ68CQ4 756 aaKnown RBP21.34■■□□□ 1.01
SIN3B-202ENST00000379803 BAZ1BQ9UIG0 1483 aaKnown RBP21.32■■□□□ 1
SIN3B-202ENST00000379803 KCNH8Q96L42 1107 aa21.31■■□□□ 1
SIN3B-202ENST00000379803 ARID4BQ4LE39 1312 aaPredicted RBP21.3■■□□□ 1
SIN3B-202ENST00000379803 CECR2Q9BXF3 1484 aa21.3■■□□□ 1
SIN3B-202ENST00000379803 PPP1R15AO75807 674 aaPredicted RBP21.28■■□□□ 1
SIN3B-202ENST00000379803 TONSLQ96HA7 1378 aa21.26■□□□□ 0.99
SIN3B-202ENST00000379803 C14orf37Q86TY3 774 aa21.22■□□□□ 0.99
SIN3B-202ENST00000379803 CHIC2Q9UKJ5 165 aa21.2■□□□□ 0.98
SIN3B-202ENST00000379803 TRHP20396 242 aaPredicted RBP21.18■□□□□ 0.98
SIN3B-202ENST00000379803 NPM2Q86SE8 214 aaKnown RBP21.16■□□□□ 0.98
SIN3B-202ENST00000379803 MROH2BQ7Z745 1585 aa21.16■□□□□ 0.98
SIN3B-202ENST00000379803 EEA1Q15075 1411 aa21.15■□□□□ 0.98
SIN3B-202ENST00000379803 BCL11AQ9H165 835 aa21.09■□□□□ 0.97
SIN3B-202ENST00000379803 KIF27Q86VH2 1401 aa21.08■□□□□ 0.96
SIN3B-202ENST00000379803 HAP1P54257 671 aaPredicted RBP21.07■□□□□ 0.96
SIN3B-202ENST00000379803 RTL5Q5HYW3 569 aaPredicted RBP21.05■□□□□ 0.96
SIN3B-202ENST00000379803 A0A0G2JS52 829 aa21.05■□□□□ 0.96
SIN3B-202ENST00000379803 WRNQ14191 1432 aaPredicted RBP eCLIP21.03■□□□□ 0.96
SIN3B-202ENST00000379803 CFDP1Q9UEE9 299 aaPredicted RBP21.02■□□□□ 0.96
SIN3B-202ENST00000379803 CLIP1P30622 1438 aa21■□□□□ 0.95
SIN3B-202ENST00000379803 KDM2AQ9Y2K7 1162 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms