RNA–Protein interactions for RNA: ENST00000523499.5

GTF2E2-205, Transcript of general transcription factor IIE subunit 2, humanhuman

TSL 4

Gene GTF2E2, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2E2-205ENST00000523499 NISCHQ9Y2I1 1504 aa44.34■■■■■ 4.69
GTF2E2-205ENST00000523499 ABCC9O60706 1549 aa40.12■■■■■ 4.01
GTF2E2-205ENST00000523499 CCDC180Q9P1Z9 1646 aa39.81■■■■□ 3.96
GTF2E2-205ENST00000523499 RB1CC1Q8TDY2 1594 aa38.09■■■■□ 3.69
GTF2E2-205ENST00000523499 DNAJC5BQ9UF47 199 aa37.96■■■■□ 3.67
GTF2E2-205ENST00000523499 NACADO15069 1562 aa37.81■■■■□ 3.64
GTF2E2-205ENST00000523499 DCAF8L2P0C7V8 631 aa37.53■■■■□ 3.6
GTF2E2-205ENST00000523499 PABPN1Q86U42 306 aaKnown RBP eCLIP37.37■■■■□ 3.57
GTF2E2-205ENST00000523499 MYO15BQ96JP2 1530 aa37.28■■■■□ 3.56
GTF2E2-205ENST00000523499 UNC13AQ9UPW8 1703 aa37.02■■■■□ 3.52
GTF2E2-205ENST00000523499 BICRAQ9NZM4 1560 aa36.95■■■■□ 3.51
GTF2E2-205ENST00000523499 ZCCHC6Q5VYS8 1495 aaKnown RBP36.68■■■■□ 3.46
GTF2E2-205ENST00000523499 DCAF1Q9Y4B6 1507 aa36.67■■■■□ 3.46
GTF2E2-205ENST00000523499 SHROOM4Q9ULL8 1493 aa36.58■■■■□ 3.45
GTF2E2-205ENST00000523499 CECR2Q9BXF3 1484 aa36.23■■■■□ 3.39
GTF2E2-205ENST00000523499 SCRIBQ14160 1630 aa36.21■■■■□ 3.39
GTF2E2-205ENST00000523499 CC2D2AQ9P2K1 1620 aa36.21■■■■□ 3.39
GTF2E2-205ENST00000523499 EIF4G1Q04637 1599 aaKnown RBP36.1■■■■□ 3.37
GTF2E2-205ENST00000523499 DNAJC5Q9H3Z4 198 aa35.14■■■■□ 3.22
GTF2E2-205ENST00000523499 NCAPD3P42695 1498 aa34.97■■■■□ 3.19
GTF2E2-205ENST00000523499 CUX2O14529 1486 aa34.78■■■■□ 3.16
GTF2E2-205ENST00000523499 ATAD2BQ9ULI0 1458 aa34.78■■■■□ 3.16
GTF2E2-205ENST00000523499 ERCC6Q03468 1493 aa34.7■■■■□ 3.15
GTF2E2-205ENST00000523499 SMARCA2P51531 1590 aa34.64■■■■□ 3.14
GTF2E2-205ENST00000523499 HMGXB3Q12766 1538 aa34.61■■■■□ 3.13
GTF2E2-205ENST00000523499 SMARCA4P51532 1647 aa34.57■■■■□ 3.12
GTF2E2-205ENST00000523499 BAZ1AQ9NRL2 1556 aaPredicted RBP34.42■■■■□ 3.1
GTF2E2-205ENST00000523499 BAZ1BQ9UIG0 1483 aaKnown RBP34.39■■■■□ 3.1
GTF2E2-205ENST00000523499 NESP48681 1621 aa34.37■■■■□ 3.09
GTF2E2-205ENST00000523499 PEG3Q9GZU2 1588 aa34.32■■■■□ 3.08
GTF2E2-205ENST00000523499 LAMC3Q9Y6N6 1575 aa34.13■■■■□ 3.05
GTF2E2-205ENST00000523499 MROH2BQ7Z745 1585 aa34.12■■■■□ 3.05
GTF2E2-205ENST00000523499 THOC2Q8NI27 1593 aaKnown RBP34.05■■■■□ 3.04
GTF2E2-205ENST00000523499 PDS5BQ9NTI5 1447 aa34.04■■■■□ 3.04
GTF2E2-205ENST00000523499 CADPSQ9ULU8 1353 aa33.9■■■■□ 3.02
GTF2E2-205ENST00000523499 KIF21AQ7Z4S6 1674 aa33.8■■■■□ 3
GTF2E2-205ENST00000523499 MRC2Q9UBG0 1479 aa33.69■■■□□ 2.98
GTF2E2-205ENST00000523499 WIZO95785 1651 aa33.61■■■□□ 2.97
GTF2E2-205ENST00000523499 WDR62O43379 1518 aa33.6■■■□□ 2.97
GTF2E2-205ENST00000523499 CEP164Q9UPV0 1460 aa33.49■■■□□ 2.95
GTF2E2-205ENST00000523499 FANCD2Q9BXW9 1451 aa33.44■■■□□ 2.94
GTF2E2-205ENST00000523499 CFTRP13569 1480 aa33.44■■■□□ 2.94
GTF2E2-205ENST00000523499 RSF1Q96T23 1441 aaPredicted RBP33.38■■■□□ 2.93
GTF2E2-205ENST00000523499 TRIM41Q8WV44 630 aa33.36■■■□□ 2.93
GTF2E2-205ENST00000523499 TOP2AP11388 1531 aaKnown RBP33.26■■■□□ 2.91
GTF2E2-205ENST00000523499 OSCARQ8IYS5 282 aa33.21■■■□□ 2.91
GTF2E2-205ENST00000523499 URB2Q14146 1524 aaKnown RBP33.16■■■□□ 2.9
GTF2E2-205ENST00000523499 CCDC88BA6NC98 1476 aa32.92■■■□□ 2.86
GTF2E2-205ENST00000523499 IFT140Q96RY7 1462 aa32.87■■■□□ 2.85
GTF2E2-205ENST00000523499 PRDM2Q13029 1718 aa32.82■■■□□ 2.84
GTF2E2-205ENST00000523499 ZNF608Q9ULD9 1512 aaPredicted RBP32.79■■■□□ 2.84
GTF2E2-205ENST00000523499 TOPBP1Q92547 1522 aa32.77■■■□□ 2.84
GTF2E2-205ENST00000523499 ABCC8Q09428 1581 aa32.75■■■□□ 2.83
GTF2E2-205ENST00000523499 RIMBP3CA6NJZ7 1639 aa32.62■■■□□ 2.81
GTF2E2-205ENST00000523499 RIMBP3BA6NNM3 1639 aa32.62■■■□□ 2.81
GTF2E2-205ENST00000523499 RIMBP3Q9UFD9 1639 aa32.62■■■□□ 2.81
GTF2E2-205ENST00000523499 DNMBPQ6XZF7 1577 aa32.59■■■□□ 2.81
GTF2E2-205ENST00000523499 ARHGEF11O15085 1522 aa32.56■■■□□ 2.8
GTF2E2-205ENST00000523499 EIF4G3O43432 1585 aaKnown RBP32.52■■■□□ 2.8
GTF2E2-205ENST00000523499 AQRO60306 1485 aaKnown RBP eCLIP32.48■■■□□ 2.79
GTF2E2-205ENST00000523499 TARBP1Q13395 1621 aaKnown RBP32.44■■■□□ 2.78
GTF2E2-205ENST00000523499 POLA1P09884 1462 aaPredicted RBP32.42■■■□□ 2.78
GTF2E2-205ENST00000523499 CYB5RLQ6IPT4 315 aa32.4■■■□□ 2.78
GTF2E2-205ENST00000523499 FBLN2P98095 1184 aa32.33■■■□□ 2.77
GTF2E2-205ENST00000523499 SOGA1O94964 1423 aa32.31■■■□□ 2.76
GTF2E2-205ENST00000523499 RAD54L2Q9Y4B4 1467 aa32.28■■■□□ 2.76
GTF2E2-205ENST00000523499 TDRD9Q8NDG6 1382 aaKnown RBP32.26■■■□□ 2.75
GTF2E2-205ENST00000523499 CHD1O14646 1710 aa32.25■■■□□ 2.75
GTF2E2-205ENST00000523499 ARAP1Q96P48 1450 aa32.23■■■□□ 2.75
GTF2E2-205ENST00000523499 WDR97A6NE52 1622 aa32.17■■■□□ 2.74
GTF2E2-205ENST00000523499 FGD5Q6ZNL6 1462 aa32.15■■■□□ 2.74
GTF2E2-205ENST00000523499 SNAPC4Q5SXM2 1469 aa32.12■■■□□ 2.73
GTF2E2-205ENST00000523499 CHMP7Q8WUX9 453 aaPredicted RBP32.11■■■□□ 2.73
GTF2E2-205ENST00000523499 TRHP20396 242 aaPredicted RBP32.09■■■□□ 2.73
GTF2E2-205ENST00000523499 MAGI1Q96QZ7 1491 aaPredicted RBP32.08■■■□□ 2.73
GTF2E2-205ENST00000523499 CUX1P39880 1505 aa32.07■■■□□ 2.72
GTF2E2-205ENST00000523499 GRIN2BQ13224 1484 aa32.05■■■□□ 2.72
GTF2E2-205ENST00000523499 CLASP1Q7Z460 1538 aa32.02■■■□□ 2.72
GTF2E2-205ENST00000523499 SYNJ1O43426 1573 aa31.98■■■□□ 2.71
GTF2E2-205ENST00000523499 SYNJ2O15056 1496 aa31.97■■■□□ 2.71
GTF2E2-205ENST00000523499 GAPVD1Q14C86 1478 aa31.89■■■□□ 2.7
GTF2E2-205ENST00000523499 ABCA10Q8WWZ4 1543 aa31.83■■■□□ 2.69
GTF2E2-205ENST00000523499 ABCA5Q8WWZ7 1642 aa31.71■■■□□ 2.67
GTF2E2-205ENST00000523499 PBRM1Q86U86 1689 aa31.7■■■□□ 2.66
GTF2E2-205ENST00000523499 WRNQ14191 1432 aaPredicted RBP eCLIP31.67■■■□□ 2.66
GTF2E2-205ENST00000523499 SUPT5HO00267 1087 aaKnown RBP31.65■■■□□ 2.66
GTF2E2-205ENST00000523499 GRIN2AQ12879 1464 aa31.6■■■□□ 2.65
GTF2E2-205ENST00000523499 NUP160Q12769 1436 aa31.56■■■□□ 2.64
GTF2E2-205ENST00000523499 FHAD1B1AJZ9 1412 aa31.5■■■□□ 2.63
GTF2E2-205ENST00000523499 ADAMTS12P58397 1594 aa31.49■■■□□ 2.63
GTF2E2-205ENST00000523499 TOP2BQ02880 1626 aa31.47■■■□□ 2.63
GTF2E2-205ENST00000523499 CEP170Q5SW79 1584 aa31.44■■■□□ 2.62
GTF2E2-205ENST00000523499 ERCC6L2Q5T890 1561 aa31.44■■■□□ 2.62
GTF2E2-205ENST00000523499 BIVM-ERCC5R4GMW8 1640 aa31.42■■■□□ 2.62
GTF2E2-205ENST00000523499 ERICH3Q5RHP9 1530 aa31.41■■■□□ 2.62
GTF2E2-205ENST00000523499 AEBP2Q6ZN18 517 aaPredicted RBP31.38■■■□□ 2.61
GTF2E2-205ENST00000523499 SHROOM2Q13796 1616 aa31.35■■■□□ 2.61
GTF2E2-205ENST00000523499 JPH4Q96JJ6 628 aa31.28■■■□□ 2.6
GTF2E2-205ENST00000523499 PRG4Q92954 1404 aaPredicted RBP31.25■■■□□ 2.59
GTF2E2-205ENST00000523499 NPM1P06748 294 aaKnown RBP eCLIP31.05■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms