RNA–Protein interactions for RNA: ENST00000532032.5

ATXN3-215, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,191 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-215ENST00000532032 AEBP2Q6ZN18 517 aaPredicted RBP29.95■■■□□ 2.39
ATXN3-215ENST00000532032 CHIC1Q5VXU3 224 aa28.56■■■□□ 2.16
ATXN3-215ENST00000532032 SENP3Q9H4L4 574 aaPredicted RBP25.56■■□□□ 1.68
ATXN3-215ENST00000532032 PHF23Q9BUL5 403 aaPredicted RBP25.23■■□□□ 1.63
ATXN3-215ENST00000532032 FOXD1Q16676 465 aa23.79■■□□□ 1.4
ATXN3-215ENST00000532032 PLPPR3Q6T4P5 718 aa22.87■■□□□ 1.25
ATXN3-215ENST00000532032 PPP6R1Q9UPN7 881 aa22.32■■□□□ 1.16
ATXN3-215ENST00000532032 PIAS4Q8N2W9 510 aaPredicted RBP22.26■■□□□ 1.15
ATXN3-215ENST00000532032 MSH5O43196 834 aa22.25■■□□□ 1.15
ATXN3-215ENST00000532032 ADRA2BP18089 450 aa22.25■■□□□ 1.15
ATXN3-215ENST00000532032 POTEDQ86YR6 584 aa21.52■■□□□ 1.04
ATXN3-215ENST00000532032 MAPK8IP2Q13387 824 aaPredicted RBP20.4■□□□□ 0.86
ATXN3-215ENST00000532032 SCAF1Q9H7N4 1312 aaKnown RBP20.39■□□□□ 0.85
ATXN3-215ENST00000532032 DMRT2Q9Y5R5 561 aa20.28■□□□□ 0.84
ATXN3-215ENST00000532032 PPP4R3CPQ6ZMV5 832 aa20.05■□□□□ 0.8
ATXN3-215ENST00000532032 CNKSR2Q8WXI2 1034 aa19.67■□□□□ 0.74
ATXN3-215ENST00000532032 HOXD11P31277 338 aaPredicted RBP19.58■□□□□ 0.72
ATXN3-215ENST00000532032 RNF216Q9NWF9 866 aaPredicted RBP19.47■□□□□ 0.71
ATXN3-215ENST00000532032 DCAF8L1A6NGE4 600 aa19.42■□□□□ 0.7
ATXN3-215ENST00000532032 NCBP3Q53F19 620 aaKnown RBP19.33■□□□□ 0.68
ATXN3-215ENST00000532032 NPM3O75607 178 aaKnown RBP19.04■□□□□ 0.64
ATXN3-215ENST00000532032 CACNB1Q02641 598 aaPredicted RBP19.01■□□□□ 0.63
ATXN3-215ENST00000532032 RNF39Q9H2S5 420 aa18.98■□□□□ 0.63
ATXN3-215ENST00000532032 DNAJC5BQ9UF47 199 aa18.91■□□□□ 0.62
ATXN3-215ENST00000532032 KCNA4P22459 653 aa18.76■□□□□ 0.59
ATXN3-215ENST00000532032 C1QBPQ07021 282 aaKnown RBP18.72■□□□□ 0.59
ATXN3-215ENST00000532032 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.64■□□□□ 0.57
ATXN3-215ENST00000532032 U3KPZ7 1027 aaPredicted RBP18.26■□□□□ 0.51
ATXN3-215ENST00000532032 SLC4A2P04920 1241 aa18.15■□□□□ 0.5
ATXN3-215ENST00000532032 SPINK5Q9NQ38 1064 aaPredicted RBP17.96■□□□□ 0.47
ATXN3-215ENST00000532032 CAPN15O75808 1086 aa17.93■□□□□ 0.46
ATXN3-215ENST00000532032 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.81■□□□□ 0.44
ATXN3-215ENST00000532032 DSG3P32926 999 aa17.81■□□□□ 0.44
ATXN3-215ENST00000532032 HNRNPUL2Q1KMD3 747 aaKnown RBP17.81■□□□□ 0.44
ATXN3-215ENST00000532032 APLP2Q06481 763 aa17.8■□□□□ 0.44
ATXN3-215ENST00000532032 SLC4A1APQ9BWU0 796 aaKnown RBP17.74■□□□□ 0.43
ATXN3-215ENST00000532032 SAMD1Q6SPF0 538 aaPredicted RBP17.71■□□□□ 0.43
ATXN3-215ENST00000532032 TRHP20396 242 aaPredicted RBP17.67■□□□□ 0.42
ATXN3-215ENST00000532032 ZNF219Q9P2Y4 722 aaPredicted RBP17.66■□□□□ 0.42
ATXN3-215ENST00000532032 MYCNP04198 464 aaPredicted RBP17.62■□□□□ 0.41
ATXN3-215ENST00000532032 ABCB7O75027 752 aa17.51■□□□□ 0.39
ATXN3-215ENST00000532032 FOXD4L1Q9NU39 408 aa17.48■□□□□ 0.39
ATXN3-215ENST00000532032 ZBTB22O15209 634 aa17.24■□□□□ 0.35
ATXN3-215ENST00000532032 POLA2Q14181 598 aa17.22■□□□□ 0.35
ATXN3-215ENST00000532032 ATF5Q9Y2D1 282 aaPredicted RBP17.18■□□□□ 0.34
ATXN3-215ENST00000532032 RBM42Q9BTD8 480 aaKnown RBP17.01■□□□□ 0.31
ATXN3-215ENST00000532032 ATXN8OSP0DMR3 200 aa16.96■□□□□ 0.31
ATXN3-215ENST00000532032 ZBTB12Q9Y330 459 aaPredicted RBP16.91■□□□□ 0.3
ATXN3-215ENST00000532032 POTEHQ6S545 545 aa16.9■□□□□ 0.3
ATXN3-215ENST00000532032 OSCARQ8IYS5 282 aa16.66■□□□□ 0.26
ATXN3-215ENST00000532032 AKT1S1Q96B36 256 aa16.64■□□□□ 0.25
ATXN3-215ENST00000532032 CHRDL2Q6WN34 429 aa16.58■□□□□ 0.24
ATXN3-215ENST00000532032 CSRNP3Q8WYN3 585 aa16.54■□□□□ 0.24
ATXN3-215ENST00000532032 FBLN2P98095 1184 aa16.53■□□□□ 0.24
ATXN3-215ENST00000532032 REM2Q8IYK8 340 aaPredicted RBP16.47■□□□□ 0.23
ATXN3-215ENST00000532032 MKRN4PQ13434 485 aaPredicted RBP16.4■□□□□ 0.22
ATXN3-215ENST00000532032 SPDYE2BA6NHP3 402 aa16.39■□□□□ 0.21
ATXN3-215ENST00000532032 SPDYE6P0CI01 402 aa16.39■□□□□ 0.21
ATXN3-215ENST00000532032 SPDYE2Q495Y8 402 aa16.39■□□□□ 0.21
ATXN3-215ENST00000532032 EHMT2Q96KQ7 1210 aa16.38■□□□□ 0.21
ATXN3-215ENST00000532032 PITPNM1O00562 1244 aa16.29■□□□□ 0.2
ATXN3-215ENST00000532032 PIP4P2Q8N4L2 257 aa16.21■□□□□ 0.19
ATXN3-215ENST00000532032 ZNF692Q9BU19 519 aaPredicted RBP16.19■□□□□ 0.18
ATXN3-215ENST00000532032 SSUH2Q9Y2M2 353 aa16.18■□□□□ 0.18
ATXN3-215ENST00000532032 FXR2P51116 673 aaKnown RBP eCLIP16.13■□□□□ 0.17
ATXN3-215ENST00000532032 SPDYE1Q8NFV5 336 aaPredicted RBP16.07■□□□□ 0.16
ATXN3-215ENST00000532032 CLEC11AQ9Y240 323 aa16.02■□□□□ 0.16
ATXN3-215ENST00000532032 PABPN1Q86U42 306 aaKnown RBP eCLIP15.96■□□□□ 0.15
ATXN3-215ENST00000532032 HAX1O00165 279 aa15.88■□□□□ 0.13
ATXN3-215ENST00000532032 SP7Q8TDD2 431 aaPredicted RBP15.88■□□□□ 0.13
ATXN3-215ENST00000532032 PRKAR2AP13861 404 aaKnown RBP15.87■□□□□ 0.13
ATXN3-215ENST00000532032 PRR29P0C7W0 189 aa15.78■□□□□ 0.12
ATXN3-215ENST00000532032 SPDYE4A6NLX3 237 aa15.69■□□□□ 0.1
ATXN3-215ENST00000532032 CHADLQ6NUI6 762 aa15.69■□□□□ 0.1
ATXN3-215ENST00000532032 EVX2Q03828 476 aa15.67■□□□□ 0.1
ATXN3-215ENST00000532032 C19orf67A6NJJ6 358 aa15.61■□□□□ 0.09
ATXN3-215ENST00000532032 STAG3Q9UJ98 1225 aa15.56■□□□□ 0.08
ATXN3-215ENST00000532032 FARP1Q9Y4F1 1045 aaPredicted RBP15.5■□□□□ 0.07
ATXN3-215ENST00000532032 CREBZFQ9NS37 354 aa15.42■□□□□ 0.06
ATXN3-215ENST00000532032 CD44P16070 742 aaKnown RBP15.37■□□□□ 0.05
ATXN3-215ENST00000532032 GABBR2O75899 941 aa15.34■□□□□ 0.05
ATXN3-215ENST00000532032 PROM2Q8N271 834 aa15.34■□□□□ 0.05
ATXN3-215ENST00000532032 CLCN6P51797 869 aa15.18■□□□□ 0.02
ATXN3-215ENST00000532032 ZRANB1Q9UGI0 708 aa15.17■□□□□ 0.02
ATXN3-215ENST00000532032 MNX1P50219 401 aaPredicted RBP15.16■□□□□ 0.02
ATXN3-215ENST00000532032 ZNF579Q8NAF0 562 aaKnown RBP15.15■□□□□ 0.02
ATXN3-215ENST00000532032 NPM1P06748 294 aaKnown RBP eCLIP15.14■□□□□ 0.01
ATXN3-215ENST00000532032 PAK3O75914 559 aaPredicted RBP15.08■□□□□ 0
ATXN3-215ENST00000532032 POTEIP0CG38 1075 aa15.02■□□□□ -0
ATXN3-215ENST00000532032 FKBP8Q14318 412 aa15□□□□□ -0.01
ATXN3-215ENST00000532032 DCBLD2Q96PD2 775 aa14.96□□□□□ -0.01
ATXN3-215ENST00000532032 PHF12Q96QT6 1004 aa14.96□□□□□ -0.01
ATXN3-215ENST00000532032 GALR2O43603 387 aaPredicted RBP14.95□□□□□ -0.02
ATXN3-215ENST00000532032 PLEKHG5O94827 1062 aa14.95□□□□□ -0.02
ATXN3-215ENST00000532032 MIER1Q8N108 512 aa14.95□□□□□ -0.02
ATXN3-215ENST00000532032 LHX8Q68G74 356 aa14.9□□□□□ -0.02
ATXN3-215ENST00000532032 TSPYL2Q9H2G4 693 aaPredicted RBP14.85□□□□□ -0.03
ATXN3-215ENST00000532032 PLCD3Q8N3E9 789 aa14.84□□□□□ -0.03
ATXN3-215ENST00000532032 CCDC61Q9Y6R9 512 aa14.79□□□□□ -0.04
ATXN3-215ENST00000532032 MS4A3Q96HJ5 214 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms