RNA–Protein interactions for RNA: ENST00000555381.5

ATXN3-232, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 803 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-232ENST00000555381 AEBP2Q6ZN18 517 aaPredicted RBP22.52■■□□□ 1.2
ATXN3-232ENST00000555381 CHIC1Q5VXU3 224 aa20.91■□□□□ 0.94
ATXN3-232ENST00000555381 SENP3Q9H4L4 574 aaPredicted RBP19.16■□□□□ 0.66
ATXN3-232ENST00000555381 PHF23Q9BUL5 403 aaPredicted RBP18.92■□□□□ 0.62
ATXN3-232ENST00000555381 POTEDQ86YR6 584 aa18.1■□□□□ 0.49
ATXN3-232ENST00000555381 FOXD1Q16676 465 aa18■□□□□ 0.47
ATXN3-232ENST00000555381 MSH5O43196 834 aa17.13■□□□□ 0.33
ATXN3-232ENST00000555381 PIAS4Q8N2W9 510 aaPredicted RBP16.7■□□□□ 0.26
ATXN3-232ENST00000555381 PPP6R1Q9UPN7 881 aa16.53■□□□□ 0.24
ATXN3-232ENST00000555381 ADRA2BP18089 450 aa16.46■□□□□ 0.23
ATXN3-232ENST00000555381 PLPPR3Q6T4P5 718 aa16.44■□□□□ 0.22
ATXN3-232ENST00000555381 MAPK8IP2Q13387 824 aaPredicted RBP15.29■□□□□ 0.04
ATXN3-232ENST00000555381 CACNB1Q02641 598 aaPredicted RBP15.15■□□□□ 0.02
ATXN3-232ENST00000555381 DMRT2Q9Y5R5 561 aa15.15■□□□□ 0.02
ATXN3-232ENST00000555381 SCAF1Q9H7N4 1312 aaKnown RBP14.92□□□□□ -0.02
ATXN3-232ENST00000555381 DCAF8L1A6NGE4 600 aa14.65□□□□□ -0.06
ATXN3-232ENST00000555381 RNF39Q9H2S5 420 aa14.52□□□□□ -0.09
ATXN3-232ENST00000555381 PPP4R3CPQ6ZMV5 832 aa14.41□□□□□ -0.1
ATXN3-232ENST00000555381 HOXD11P31277 338 aaPredicted RBP14.4□□□□□ -0.1
ATXN3-232ENST00000555381 C1QBPQ07021 282 aaKnown RBP14.27□□□□□ -0.13
ATXN3-232ENST00000555381 CNKSR2Q8WXI2 1034 aa14.19□□□□□ -0.14
ATXN3-232ENST00000555381 RNF216Q9NWF9 866 aaPredicted RBP14.16□□□□□ -0.14
ATXN3-232ENST00000555381 POTEHQ6S545 545 aa14.02□□□□□ -0.17
ATXN3-232ENST00000555381 DNAJC5BQ9UF47 199 aa13.92□□□□□ -0.18
ATXN3-232ENST00000555381 NCBP3Q53F19 620 aaKnown RBP13.8□□□□□ -0.2
ATXN3-232ENST00000555381 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.77□□□□□ -0.21
ATXN3-232ENST00000555381 NPM3O75607 178 aaKnown RBP13.59□□□□□ -0.23
ATXN3-232ENST00000555381 U3KPZ7 1027 aaPredicted RBP13.44□□□□□ -0.26
ATXN3-232ENST00000555381 SPINK5Q9NQ38 1064 aaPredicted RBP13.43□□□□□ -0.26
ATXN3-232ENST00000555381 CAPN15O75808 1086 aa13.39□□□□□ -0.27
ATXN3-232ENST00000555381 DSG3P32926 999 aa13.39□□□□□ -0.27
ATXN3-232ENST00000555381 KCNA4P22459 653 aa13.23□□□□□ -0.29
ATXN3-232ENST00000555381 ABCB7O75027 752 aa13.09□□□□□ -0.31
ATXN3-232ENST00000555381 TRHP20396 242 aaPredicted RBP13.09□□□□□ -0.31
ATXN3-232ENST00000555381 SLC4A2P04920 1241 aa13.06□□□□□ -0.32
ATXN3-232ENST00000555381 ZNF219Q9P2Y4 722 aaPredicted RBP12.93□□□□□ -0.34
ATXN3-232ENST00000555381 APLP2Q06481 763 aa12.87□□□□□ -0.35
ATXN3-232ENST00000555381 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.79□□□□□ -0.36
ATXN3-232ENST00000555381 HNRNPUL2Q1KMD3 747 aaKnown RBP12.79□□□□□ -0.36
ATXN3-232ENST00000555381 CHRDL2Q6WN34 429 aa12.76□□□□□ -0.37
ATXN3-232ENST00000555381 SP7Q8TDD2 431 aaPredicted RBP12.76□□□□□ -0.37
ATXN3-232ENST00000555381 RBM42Q9BTD8 480 aaKnown RBP12.75□□□□□ -0.37
ATXN3-232ENST00000555381 SAMD1Q6SPF0 538 aaPredicted RBP12.72□□□□□ -0.37
ATXN3-232ENST00000555381 POLA2Q14181 598 aa12.62□□□□□ -0.39
ATXN3-232ENST00000555381 MYCNP04198 464 aaPredicted RBP12.57□□□□□ -0.4
ATXN3-232ENST00000555381 SLC4A1APQ9BWU0 796 aaKnown RBP12.48□□□□□ -0.41
ATXN3-232ENST00000555381 FOXD4L1Q9NU39 408 aa12.38□□□□□ -0.43
ATXN3-232ENST00000555381 AKT1S1Q96B36 256 aa12.35□□□□□ -0.43
ATXN3-232ENST00000555381 ATF5Q9Y2D1 282 aaPredicted RBP12.33□□□□□ -0.44
ATXN3-232ENST00000555381 PIP4P2Q8N4L2 257 aa12.3□□□□□ -0.44
ATXN3-232ENST00000555381 REM2Q8IYK8 340 aaPredicted RBP12.29□□□□□ -0.44
ATXN3-232ENST00000555381 HAX1O00165 279 aa12.25□□□□□ -0.45
ATXN3-232ENST00000555381 OSCARQ8IYS5 282 aa12.24□□□□□ -0.45
ATXN3-232ENST00000555381 ZBTB12Q9Y330 459 aaPredicted RBP12.19□□□□□ -0.46
ATXN3-232ENST00000555381 PITPNM1O00562 1244 aa12.18□□□□□ -0.46
ATXN3-232ENST00000555381 NISCHQ9Y2I1 1504 aa12.16□□□□□ -0.46
ATXN3-232ENST00000555381 ZBTB22O15209 634 aa12.15□□□□□ -0.46
ATXN3-232ENST00000555381 FXR2P51116 673 aaKnown RBP eCLIP12.12□□□□□ -0.47
ATXN3-232ENST00000555381 EVX2Q03828 476 aa12.1□□□□□ -0.47
ATXN3-232ENST00000555381 ATXN8OSP0DMR3 200 aa11.99□□□□□ -0.49
ATXN3-232ENST00000555381 LHX8Q68G74 356 aa11.93□□□□□ -0.5
ATXN3-232ENST00000555381 EHMT2Q96KQ7 1210 aa11.91□□□□□ -0.5
ATXN3-232ENST00000555381 CSRNP3Q8WYN3 585 aa11.87□□□□□ -0.51
ATXN3-232ENST00000555381 PRKAR2AP13861 404 aaKnown RBP11.86□□□□□ -0.51
ATXN3-232ENST00000555381 FBLN2P98095 1184 aa11.85□□□□□ -0.51
ATXN3-232ENST00000555381 PLSCR2Q9NRY7 297 aa11.84□□□□□ -0.51
ATXN3-232ENST00000555381 CLEC11AQ9Y240 323 aa11.84□□□□□ -0.51
ATXN3-232ENST00000555381 SPDYE2BA6NHP3 402 aa11.82□□□□□ -0.52
ATXN3-232ENST00000555381 SPDYE6P0CI01 402 aa11.82□□□□□ -0.52
ATXN3-232ENST00000555381 SPDYE2Q495Y8 402 aa11.82□□□□□ -0.52
ATXN3-232ENST00000555381 C19orf67A6NJJ6 358 aa11.76□□□□□ -0.53
ATXN3-232ENST00000555381 SPDYE1Q8NFV5 336 aaPredicted RBP11.74□□□□□ -0.53
ATXN3-232ENST00000555381 GABBR2O75899 941 aa11.73□□□□□ -0.53
ATXN3-232ENST00000555381 MKRN4PQ13434 485 aaPredicted RBP11.71□□□□□ -0.53
ATXN3-232ENST00000555381 CHADLQ6NUI6 762 aa11.69□□□□□ -0.54
ATXN3-232ENST00000555381 ZNF692Q9BU19 519 aaPredicted RBP11.67□□□□□ -0.54
ATXN3-232ENST00000555381 SSUH2Q9Y2M2 353 aa11.64□□□□□ -0.55
ATXN3-232ENST00000555381 PRR29P0C7W0 189 aa11.53□□□□□ -0.56
ATXN3-232ENST00000555381 POTEIP0CG38 1075 aa11.51□□□□□ -0.57
ATXN3-232ENST00000555381 PABPN1Q86U42 306 aaKnown RBP eCLIP11.51□□□□□ -0.57
ATXN3-232ENST00000555381 CD44P16070 742 aaKnown RBP11.45□□□□□ -0.58
ATXN3-232ENST00000555381 FARP1Q9Y4F1 1045 aaPredicted RBP11.4□□□□□ -0.58
ATXN3-232ENST00000555381 CLCN6P51797 869 aa11.35□□□□□ -0.59
ATXN3-232ENST00000555381 DCBLD2Q96PD2 775 aa11.3□□□□□ -0.6
ATXN3-232ENST00000555381 ABCC9O60706 1549 aa11.29□□□□□ -0.6
ATXN3-232ENST00000555381 POTEMA6NI47 508 aa11.28□□□□□ -0.6
ATXN3-232ENST00000555381 ZRANB1Q9UGI0 708 aa11.23□□□□□ -0.61
ATXN3-232ENST00000555381 POTEGQ6S5H5 508 aa11.22□□□□□ -0.61
ATXN3-232ENST00000555381 OTUD5Q96G74 571 aa11.21□□□□□ -0.61
ATXN3-232ENST00000555381 PCDH10Q9P2E7 1040 aa11.21□□□□□ -0.61
ATXN3-232ENST00000555381 ZNF579Q8NAF0 562 aaKnown RBP11.2□□□□□ -0.62
ATXN3-232ENST00000555381 GALR2O43603 387 aaPredicted RBP11.18□□□□□ -0.62
ATXN3-232ENST00000555381 CREBZFQ9NS37 354 aa11.15□□□□□ -0.62
ATXN3-232ENST00000555381 POTEB2H3BUK9 544 aa11.14□□□□□ -0.63
ATXN3-232ENST00000555381 SPDYE4A6NLX3 237 aa11.13□□□□□ -0.63
ATXN3-232ENST00000555381 STAG3Q9UJ98 1225 aa11.11□□□□□ -0.63
ATXN3-232ENST00000555381 PHF12Q96QT6 1004 aa11.08□□□□□ -0.64
ATXN3-232ENST00000555381 PELP1Q8IZL8 1130 aaKnown RBP11.03□□□□□ -0.64
ATXN3-232ENST00000555381 PAK3O75914 559 aaPredicted RBP10.97□□□□□ -0.65
ATXN3-232ENST00000555381 POTEJP0CG39 1038 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms