RNA–Protein interactions for RNA: ENST00000536559.1

CCND1-203, Transcript of cyclin D1, humanhuman

TSL 3 BASIC

Gene CCND1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-203ENST00000536559 NISCHQ9Y2I1 1504 aa40.99■■■■■ 4.15
CCND1-203ENST00000536559 CCDC180Q9P1Z9 1646 aa36.69■■■■□ 3.46
CCND1-203ENST00000536559 ABCC9O60706 1549 aa36.49■■■■□ 3.43
CCND1-203ENST00000536559 RB1CC1Q8TDY2 1594 aa34.87■■■■□ 3.17
CCND1-203ENST00000536559 DCAF8L2P0C7V8 631 aa34.71■■■■□ 3.15
CCND1-203ENST00000536559 NACADO15069 1562 aa34.67■■■■□ 3.14
CCND1-203ENST00000536559 MYO15BQ96JP2 1530 aa34.24■■■■□ 3.07
CCND1-203ENST00000536559 PABPN1Q86U42 306 aaKnown RBP eCLIP34.04■■■■□ 3.04
CCND1-203ENST00000536559 ZCCHC6Q5VYS8 1495 aaKnown RBP33.98■■■■□ 3.03
CCND1-203ENST00000536559 DNAJC5BQ9UF47 199 aa33.95■■■■□ 3.03
CCND1-203ENST00000536559 UNC13AQ9UPW8 1703 aa33.95■■■■□ 3.03
CCND1-203ENST00000536559 DCAF1Q9Y4B6 1507 aa33.88■■■■□ 3.01
CCND1-203ENST00000536559 BICRAQ9NZM4 1560 aa33.69■■■□□ 2.98
CCND1-203ENST00000536559 SCRIBQ14160 1630 aa33.43■■■□□ 2.94
CCND1-203ENST00000536559 SHROOM4Q9ULL8 1493 aa33.4■■■□□ 2.94
CCND1-203ENST00000536559 CC2D2AQ9P2K1 1620 aa32.95■■■□□ 2.86
CCND1-203ENST00000536559 EIF4G1Q04637 1599 aaKnown RBP32.93■■■□□ 2.86
CCND1-203ENST00000536559 CECR2Q9BXF3 1484 aa32.86■■■□□ 2.85
CCND1-203ENST00000536559 NCAPD3P42695 1498 aa31.98■■■□□ 2.71
CCND1-203ENST00000536559 SMARCA4P51532 1647 aa31.91■■■□□ 2.7
CCND1-203ENST00000536559 ATAD2BQ9ULI0 1458 aa31.91■■■□□ 2.7
CCND1-203ENST00000536559 SMARCA2P51531 1590 aa31.89■■■□□ 2.7
CCND1-203ENST00000536559 BAZ1AQ9NRL2 1556 aaPredicted RBP31.85■■■□□ 2.69
CCND1-203ENST00000536559 HMGXB3Q12766 1538 aa31.75■■■□□ 2.67
CCND1-203ENST00000536559 BAZ1BQ9UIG0 1483 aaKnown RBP31.66■■■□□ 2.66
CCND1-203ENST00000536559 PEG3Q9GZU2 1588 aa31.58■■■□□ 2.65
CCND1-203ENST00000536559 ERCC6Q03468 1493 aa31.58■■■□□ 2.65
CCND1-203ENST00000536559 MROH2BQ7Z745 1585 aa31.55■■■□□ 2.64
CCND1-203ENST00000536559 CUX2O14529 1486 aa31.38■■■□□ 2.61
CCND1-203ENST00000536559 NESP48681 1621 aa31.35■■■□□ 2.61
CCND1-203ENST00000536559 LAMC3Q9Y6N6 1575 aa31.25■■■□□ 2.59
CCND1-203ENST00000536559 WIZO95785 1651 aa31.19■■■□□ 2.58
CCND1-203ENST00000536559 PDS5BQ9NTI5 1447 aa31.14■■■□□ 2.58
CCND1-203ENST00000536559 DNAJC5Q9H3Z4 198 aa31.12■■■□□ 2.57
CCND1-203ENST00000536559 CADPSQ9ULU8 1353 aa31.06■■■□□ 2.56
CCND1-203ENST00000536559 RSF1Q96T23 1441 aaPredicted RBP31.01■■■□□ 2.55
CCND1-203ENST00000536559 KIF21AQ7Z4S6 1674 aa30.96■■■□□ 2.55
CCND1-203ENST00000536559 THOC2Q8NI27 1593 aaKnown RBP30.96■■■□□ 2.55
CCND1-203ENST00000536559 TOP2AP11388 1531 aaKnown RBP30.84■■■□□ 2.53
CCND1-203ENST00000536559 MRC2Q9UBG0 1479 aa30.77■■■□□ 2.52
CCND1-203ENST00000536559 CEP164Q9UPV0 1460 aa30.72■■■□□ 2.51
CCND1-203ENST00000536559 CFTRP13569 1480 aa30.71■■■□□ 2.51
CCND1-203ENST00000536559 FANCD2Q9BXW9 1451 aa30.69■■■□□ 2.5
CCND1-203ENST00000536559 WDR62O43379 1518 aa30.64■■■□□ 2.5
CCND1-203ENST00000536559 CCDC88BA6NC98 1476 aa30.5■■■□□ 2.47
CCND1-203ENST00000536559 PRDM2Q13029 1718 aa30.41■■■□□ 2.46
CCND1-203ENST00000536559 URB2Q14146 1524 aaKnown RBP30.35■■■□□ 2.45
CCND1-203ENST00000536559 ABCC8Q09428 1581 aa30.17■■■□□ 2.42
CCND1-203ENST00000536559 IFT140Q96RY7 1462 aa30.11■■■□□ 2.41
CCND1-203ENST00000536559 TOPBP1Q92547 1522 aa30.11■■■□□ 2.41
CCND1-203ENST00000536559 OSCARQ8IYS5 282 aa30.09■■■□□ 2.41
CCND1-203ENST00000536559 DNMBPQ6XZF7 1577 aa30.03■■■□□ 2.4
CCND1-203ENST00000536559 SUPT5HO00267 1087 aaKnown RBP29.96■■■□□ 2.39
CCND1-203ENST00000536559 ZNF608Q9ULD9 1512 aaPredicted RBP29.95■■■□□ 2.38
CCND1-203ENST00000536559 TRIM41Q8WV44 630 aa29.92■■■□□ 2.38
CCND1-203ENST00000536559 POLA1P09884 1462 aaPredicted RBP29.8■■■□□ 2.36
CCND1-203ENST00000536559 EIF4G3O43432 1585 aaKnown RBP29.8■■■□□ 2.36
CCND1-203ENST00000536559 TARBP1Q13395 1621 aaKnown RBP29.78■■■□□ 2.36
CCND1-203ENST00000536559 AQRO60306 1485 aaKnown RBP eCLIP29.76■■■□□ 2.356e-10■■■■□ 19.8
CCND1-203ENST00000536559 SOGA1O94964 1423 aa29.76■■■□□ 2.35
CCND1-203ENST00000536559 RAD54L2Q9Y4B4 1467 aa29.69■■■□□ 2.34
CCND1-203ENST00000536559 FBLN2P98095 1184 aa29.67■■■□□ 2.34
CCND1-203ENST00000536559 FGD5Q6ZNL6 1462 aa29.67■■■□□ 2.34
CCND1-203ENST00000536559 TDRD9Q8NDG6 1382 aaKnown RBP29.64■■■□□ 2.33
CCND1-203ENST00000536559 CUX1P39880 1505 aa29.63■■■□□ 2.33
CCND1-203ENST00000536559 WDR97A6NE52 1622 aa29.57■■■□□ 2.32
CCND1-203ENST00000536559 CHD1O14646 1710 aa29.54■■■□□ 2.32
CCND1-203ENST00000536559 RIMBP3CA6NJZ7 1639 aa29.51■■■□□ 2.31
CCND1-203ENST00000536559 RIMBP3BA6NNM3 1639 aa29.51■■■□□ 2.31
CCND1-203ENST00000536559 RIMBP3Q9UFD9 1639 aa29.51■■■□□ 2.31
CCND1-203ENST00000536559 CHMP7Q8WUX9 453 aaPredicted RBP29.48■■■□□ 2.31
CCND1-203ENST00000536559 ARHGEF11O15085 1522 aa29.46■■■□□ 2.31
CCND1-203ENST00000536559 GRIN2BQ13224 1484 aa29.46■■■□□ 2.31
CCND1-203ENST00000536559 SNAPC4Q5SXM2 1469 aa29.45■■■□□ 2.31
CCND1-203ENST00000536559 MAGI1Q96QZ7 1491 aaPredicted RBP29.42■■■□□ 2.3
CCND1-203ENST00000536559 GAPVD1Q14C86 1478 aa29.38■■■□□ 2.29
CCND1-203ENST00000536559 WRNQ14191 1432 aaPredicted RBP eCLIP29.36■■■□□ 2.29
CCND1-203ENST00000536559 CYB5RLQ6IPT4 315 aa29.35■■■□□ 2.29
CCND1-203ENST00000536559 ABCA10Q8WWZ4 1543 aa29.35■■■□□ 2.29
CCND1-203ENST00000536559 SYNJ2O15056 1496 aa29.32■■■□□ 2.28
CCND1-203ENST00000536559 SYNJ1O43426 1573 aa29.3■■■□□ 2.28
CCND1-203ENST00000536559 PBRM1Q86U86 1689 aa29.28■■■□□ 2.28
CCND1-203ENST00000536559 TOP2BQ02880 1626 aa29.26■■■□□ 2.27
CCND1-203ENST00000536559 ABCA5Q8WWZ7 1642 aa29.23■■■□□ 2.27
CCND1-203ENST00000536559 BIVM-ERCC5R4GMW8 1640 aa29.23■■■□□ 2.27
CCND1-203ENST00000536559 CLASP1Q7Z460 1538 aa29.18■■■□□ 2.26
CCND1-203ENST00000536559 ARAP1Q96P48 1450 aa29.16■■■□□ 2.26
CCND1-203ENST00000536559 GRIN2AQ12879 1464 aa29.04■■■□□ 2.24
CCND1-203ENST00000536559 FHAD1B1AJZ9 1412 aa29.03■■■□□ 2.24
CCND1-203ENST00000536559 TRHP20396 242 aaPredicted RBP29.02■■■□□ 2.24
CCND1-203ENST00000536559 ADAMTS12P58397 1594 aa29.01■■■□□ 2.23
CCND1-203ENST00000536559 ERICH3Q5RHP9 1530 aa29■■■□□ 2.23
CCND1-203ENST00000536559 NUP160Q12769 1436 aa28.9■■■□□ 2.22
CCND1-203ENST00000536559 CEP170Q5SW79 1584 aa28.87■■■□□ 2.21
CCND1-203ENST00000536559 KIF27Q86VH2 1401 aa28.79■■■□□ 2.2
CCND1-203ENST00000536559 JPH4Q96JJ6 628 aa28.73■■■□□ 2.19
CCND1-203ENST00000536559 SHROOM2Q13796 1616 aa28.72■■■□□ 2.19
CCND1-203ENST00000536559 ERCC6L2Q5T890 1561 aa28.71■■■□□ 2.19
CCND1-203ENST00000536559 IGF1RP08069 1367 aa28.69■■■□□ 2.18
CCND1-203ENST00000536559 PRG4Q92954 1404 aaPredicted RBP28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms