RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 AEBP2Q6ZN18 517 aaPredicted RBP20.47■□□□□ 0.87
ATXN3-237ENST00000556274 CHIC1Q5VXU3 224 aa19.04■□□□□ 0.64
ATXN3-237ENST00000556274 SENP3Q9H4L4 574 aaPredicted RBP17.49■□□□□ 0.39
ATXN3-237ENST00000556274 PHF23Q9BUL5 403 aaPredicted RBP17.2■□□□□ 0.34
ATXN3-237ENST00000556274 FOXD1Q16676 465 aa16.43■□□□□ 0.22
ATXN3-237ENST00000556274 POTEDQ86YR6 584 aa16.3■□□□□ 0.2
ATXN3-237ENST00000556274 MSH5O43196 834 aa15.55■□□□□ 0.08
ATXN3-237ENST00000556274 PIAS4Q8N2W9 510 aaPredicted RBP15.17■□□□□ 0.02
ATXN3-237ENST00000556274 PPP6R1Q9UPN7 881 aa14.89□□□□□ -0.03
ATXN3-237ENST00000556274 ADRA2BP18089 450 aa14.79□□□□□ -0.04
ATXN3-237ENST00000556274 PLPPR3Q6T4P5 718 aa14.73□□□□□ -0.05
ATXN3-237ENST00000556274 DMRT2Q9Y5R5 561 aa13.79□□□□□ -0.2
ATXN3-237ENST00000556274 MAPK8IP2Q13387 824 aaPredicted RBP13.78□□□□□ -0.2
ATXN3-237ENST00000556274 CACNB1Q02641 598 aaPredicted RBP13.73□□□□□ -0.21
ATXN3-237ENST00000556274 SCAF1Q9H7N4 1312 aaKnown RBP13.44□□□□□ -0.26
ATXN3-237ENST00000556274 RNF39Q9H2S5 420 aa13.24□□□□□ -0.29
ATXN3-237ENST00000556274 DCAF8L1A6NGE4 600 aa13.22□□□□□ -0.29
ATXN3-237ENST00000556274 HOXD11P31277 338 aaPredicted RBP13.05□□□□□ -0.32
ATXN3-237ENST00000556274 C1QBPQ07021 282 aaKnown RBP12.99□□□□□ -0.33
ATXN3-237ENST00000556274 PPP4R3CPQ6ZMV5 832 aa12.99□□□□□ -0.33
ATXN3-237ENST00000556274 RNF216Q9NWF9 866 aaPredicted RBP12.76□□□□□ -0.37
ATXN3-237ENST00000556274 KCNA4P22459 653 aa12.74□□□□□ -0.37
ATXN3-237ENST00000556274 CNKSR2Q8WXI2 1034 aa12.71□□□□□ -0.37
ATXN3-237ENST00000556274 DNAJC5BQ9UF47 199 aa12.69□□□□□ -0.38
ATXN3-237ENST00000556274 NCBP3Q53F19 620 aaKnown RBP12.68□□□□□ -0.38
ATXN3-237ENST00000556274 POTEHQ6S545 545 aa12.63□□□□□ -0.39
ATXN3-237ENST00000556274 NPM3O75607 178 aaKnown RBP12.47□□□□□ -0.41
ATXN3-237ENST00000556274 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.38□□□□□ -0.43
ATXN3-237ENST00000556274 DSG3P32926 999 aa12.2□□□□□ -0.46
ATXN3-237ENST00000556274 SLC4A1APQ9BWU0 796 aaKnown RBP12.16□□□□□ -0.46
ATXN3-237ENST00000556274 SPINK5Q9NQ38 1064 aaPredicted RBP12.13□□□□□ -0.47
ATXN3-237ENST00000556274 U3KPZ7 1027 aaPredicted RBP12.12□□□□□ -0.47
ATXN3-237ENST00000556274 CAPN15O75808 1086 aa12.08□□□□□ -0.48
ATXN3-237ENST00000556274 EHMT2Q96KQ7 1210 aa11.89□□□□□ -0.51
ATXN3-237ENST00000556274 ABCB7O75027 752 aa11.79□□□□□ -0.52
ATXN3-237ENST00000556274 SLC4A2P04920 1241 aa11.76□□□□□ -0.53
ATXN3-237ENST00000556274 TRHP20396 242 aaPredicted RBP11.75□□□□□ -0.53
ATXN3-237ENST00000556274 FOXD4L1Q9NU39 408 aa11.71□□□□□ -0.53
ATXN3-237ENST00000556274 ZBTB22O15209 634 aa11.7□□□□□ -0.54
ATXN3-237ENST00000556274 CSRNP3Q8WYN3 585 aa11.7□□□□□ -0.54
ATXN3-237ENST00000556274 ZNF219Q9P2Y4 722 aaPredicted RBP11.68□□□□□ -0.54
ATXN3-237ENST00000556274 CHRDL2Q6WN34 429 aa11.63□□□□□ -0.55
ATXN3-237ENST00000556274 RBM42Q9BTD8 480 aaKnown RBP11.61□□□□□ -0.55
ATXN3-237ENST00000556274 APLP2Q06481 763 aa11.6□□□□□ -0.55
ATXN3-237ENST00000556274 SP7Q8TDD2 431 aaPredicted RBP11.54□□□□□ -0.56
ATXN3-237ENST00000556274 MYCNP04198 464 aaPredicted RBP11.52□□□□□ -0.57
ATXN3-237ENST00000556274 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.46□□□□□ -0.57
ATXN3-237ENST00000556274 HNRNPUL2Q1KMD3 747 aaKnown RBP11.46□□□□□ -0.57
ATXN3-237ENST00000556274 SAMD1Q6SPF0 538 aaPredicted RBP11.38□□□□□ -0.59
ATXN3-237ENST00000556274 POLA2Q14181 598 aa11.3□□□□□ -0.6
ATXN3-237ENST00000556274 ATXN8OSP0DMR3 200 aa11.29□□□□□ -0.6
ATXN3-237ENST00000556274 PIP4P2Q8N4L2 257 aa11.24□□□□□ -0.61
ATXN3-237ENST00000556274 AKT1S1Q96B36 256 aa11.22□□□□□ -0.61
ATXN3-237ENST00000556274 ATF5Q9Y2D1 282 aaPredicted RBP11.21□□□□□ -0.61
ATXN3-237ENST00000556274 HAX1O00165 279 aa11.17□□□□□ -0.62
ATXN3-237ENST00000556274 REM2Q8IYK8 340 aaPredicted RBP11.14□□□□□ -0.63
ATXN3-237ENST00000556274 FXR2P51116 673 aaKnown RBP eCLIP11.07□□□□□ -0.64
ATXN3-237ENST00000556274 EVX2Q03828 476 aa11.06□□□□□ -0.64
ATXN3-237ENST00000556274 PITPNM1O00562 1244 aa11.04□□□□□ -0.64
ATXN3-237ENST00000556274 OSCARQ8IYS5 282 aa10.98□□□□□ -0.65
ATXN3-237ENST00000556274 ZBTB12Q9Y330 459 aaPredicted RBP10.97□□□□□ -0.65
ATXN3-237ENST00000556274 NISCHQ9Y2I1 1504 aa10.91□□□□□ -0.66
ATXN3-237ENST00000556274 LHX8Q68G74 356 aa10.82□□□□□ -0.68
ATXN3-237ENST00000556274 FBLN2P98095 1184 aa10.76□□□□□ -0.69
ATXN3-237ENST00000556274 C19orf67A6NJJ6 358 aa10.73□□□□□ -0.69
ATXN3-237ENST00000556274 GABBR2O75899 941 aa10.73□□□□□ -0.69
ATXN3-237ENST00000556274 PRKAR2AP13861 404 aaKnown RBP10.73□□□□□ -0.69
ATXN3-237ENST00000556274 MKRN4PQ13434 485 aaPredicted RBP10.72□□□□□ -0.69
ATXN3-237ENST00000556274 PLSCR2Q9NRY7 297 aa10.64□□□□□ -0.71
ATXN3-237ENST00000556274 SPDYE2BA6NHP3 402 aa10.61□□□□□ -0.71
ATXN3-237ENST00000556274 SPDYE6P0CI01 402 aa10.61□□□□□ -0.71
ATXN3-237ENST00000556274 SPDYE2Q495Y8 402 aa10.61□□□□□ -0.71
ATXN3-237ENST00000556274 FKBP8Q14318 412 aa10.6□□□□□ -0.71
ATXN3-237ENST00000556274 CLEC11AQ9Y240 323 aa10.6□□□□□ -0.71
ATXN3-237ENST00000556274 SPDYE1Q8NFV5 336 aaPredicted RBP10.57□□□□□ -0.72
ATXN3-237ENST00000556274 SPDYE4A6NLX3 237 aa10.54□□□□□ -0.72
ATXN3-237ENST00000556274 POTEIP0CG38 1075 aa10.54□□□□□ -0.72
ATXN3-237ENST00000556274 CHADLQ6NUI6 762 aa10.5□□□□□ -0.73
ATXN3-237ENST00000556274 ZNF692Q9BU19 519 aaPredicted RBP10.48□□□□□ -0.73
ATXN3-237ENST00000556274 SSUH2Q9Y2M2 353 aa10.44□□□□□ -0.74
ATXN3-237ENST00000556274 CD44P16070 742 aaKnown RBP10.35□□□□□ -0.75
ATXN3-237ENST00000556274 PABPN1Q86U42 306 aaKnown RBP eCLIP10.33□□□□□ -0.76
ATXN3-237ENST00000556274 PRR29P0C7W0 189 aa10.32□□□□□ -0.76
ATXN3-237ENST00000556274 PROM2Q8N271 834 aa10.3□□□□□ -0.76
ATXN3-237ENST00000556274 CLCN6P51797 869 aa10.28□□□□□ -0.76
ATXN3-237ENST00000556274 DCBLD2Q96PD2 775 aa10.27□□□□□ -0.77
ATXN3-237ENST00000556274 FARP1Q9Y4F1 1045 aaPredicted RBP10.25□□□□□ -0.77
ATXN3-237ENST00000556274 OTUD5Q96G74 571 aa10.24□□□□□ -0.77
ATXN3-237ENST00000556274 POTEMA6NI47 508 aa10.22□□□□□ -0.77
ATXN3-237ENST00000556274 FBXO3Q9UK99 471 aa10.2□□□□□ -0.78
ATXN3-237ENST00000556274 POTEB2H3BUK9 544 aa10.19□□□□□ -0.78
ATXN3-237ENST00000556274 POTEGQ6S5H5 508 aa10.17□□□□□ -0.78
ATXN3-237ENST00000556274 ZNF579Q8NAF0 562 aaKnown RBP10.17□□□□□ -0.78
ATXN3-237ENST00000556274 STAG3Q9UJ98 1225 aa10.16□□□□□ -0.78
ATXN3-237ENST00000556274 GALR2O43603 387 aaPredicted RBP10.12□□□□□ -0.79
ATXN3-237ENST00000556274 ZRANB1Q9UGI0 708 aa10.11□□□□□ -0.79
ATXN3-237ENST00000556274 VASPP50552 380 aaPredicted RBP10.05□□□□□ -0.8
ATXN3-237ENST00000556274 PCDH10Q9P2E7 1040 aa10.03□□□□□ -0.8
ATXN3-237ENST00000556274 MIER1Q8N108 512 aa10.01□□□□□ -0.81
ATXN3-237ENST00000556274 PLCD3Q8N3E9 789 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms