RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 AEBP2Q6ZN18 517 aaPredicted RBP21.2■□□□□ 0.98
ATXN3-230ENST00000554673 CHIC1Q5VXU3 224 aa19.82■□□□□ 0.76
ATXN3-230ENST00000554673 SENP3Q9H4L4 574 aaPredicted RBP18.11■□□□□ 0.49
ATXN3-230ENST00000554673 PHF23Q9BUL5 403 aaPredicted RBP17.87■□□□□ 0.45
ATXN3-230ENST00000554673 FOXD1Q16676 465 aa16.94■□□□□ 0.3
ATXN3-230ENST00000554673 POTEDQ86YR6 584 aa16.09■□□□□ 0.17
ATXN3-230ENST00000554673 MSH5O43196 834 aa15.94■□□□□ 0.14
ATXN3-230ENST00000554673 PIAS4Q8N2W9 510 aaPredicted RBP15.81■□□□□ 0.12
ATXN3-230ENST00000554673 PLPPR3Q6T4P5 718 aa15.72■□□□□ 0.11
ATXN3-230ENST00000554673 PPP6R1Q9UPN7 881 aa15.63■□□□□ 0.09
ATXN3-230ENST00000554673 ADRA2BP18089 450 aa15.6■□□□□ 0.09
ATXN3-230ENST00000554673 MAPK8IP2Q13387 824 aaPredicted RBP14.42□□□□□ -0.1
ATXN3-230ENST00000554673 DMRT2Q9Y5R5 561 aa14.3□□□□□ -0.12
ATXN3-230ENST00000554673 SCAF1Q9H7N4 1312 aaKnown RBP14.23□□□□□ -0.13
ATXN3-230ENST00000554673 CACNB1Q02641 598 aaPredicted RBP13.94□□□□□ -0.18
ATXN3-230ENST00000554673 DCAF8L1A6NGE4 600 aa13.91□□□□□ -0.18
ATXN3-230ENST00000554673 NISCHQ9Y2I1 1504 aa13.88□□□□□ -0.19
ATXN3-230ENST00000554673 PPP4R3CPQ6ZMV5 832 aa13.77□□□□□ -0.21
ATXN3-230ENST00000554673 HOXD11P31277 338 aaPredicted RBP13.64□□□□□ -0.23
ATXN3-230ENST00000554673 RNF39Q9H2S5 420 aa13.56□□□□□ -0.24
ATXN3-230ENST00000554673 CNKSR2Q8WXI2 1034 aa13.55□□□□□ -0.24
ATXN3-230ENST00000554673 RNF216Q9NWF9 866 aaPredicted RBP13.48□□□□□ -0.25
ATXN3-230ENST00000554673 C1QBPQ07021 282 aaKnown RBP13.34□□□□□ -0.27
ATXN3-230ENST00000554673 NCBP3Q53F19 620 aaKnown RBP13.14□□□□□ -0.31
ATXN3-230ENST00000554673 DNAJC5BQ9UF47 199 aa13.13□□□□□ -0.31
ATXN3-230ENST00000554673 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.11□□□□□ -0.31
ATXN3-230ENST00000554673 NPM3O75607 178 aaKnown RBP12.95□□□□□ -0.34
ATXN3-230ENST00000554673 U3KPZ7 1027 aaPredicted RBP12.75□□□□□ -0.37
ATXN3-230ENST00000554673 CAPN15O75808 1086 aa12.73□□□□□ -0.37
ATXN3-230ENST00000554673 SPINK5Q9NQ38 1064 aaPredicted RBP12.69□□□□□ -0.38
ATXN3-230ENST00000554673 DSG3P32926 999 aa12.62□□□□□ -0.39
ATXN3-230ENST00000554673 POTEHQ6S545 545 aa12.56□□□□□ -0.4
ATXN3-230ENST00000554673 KCNA4P22459 653 aa12.48□□□□□ -0.41
ATXN3-230ENST00000554673 TRHP20396 242 aaPredicted RBP12.47□□□□□ -0.41
ATXN3-230ENST00000554673 ABCB7O75027 752 aa12.43□□□□□ -0.42
ATXN3-230ENST00000554673 SLC4A2P04920 1241 aa12.43□□□□□ -0.42
ATXN3-230ENST00000554673 APLP2Q06481 763 aa12.35□□□□□ -0.43
ATXN3-230ENST00000554673 ZNF219Q9P2Y4 722 aaPredicted RBP12.33□□□□□ -0.44
ATXN3-230ENST00000554673 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.26□□□□□ -0.45
ATXN3-230ENST00000554673 HNRNPUL2Q1KMD3 747 aaKnown RBP12.26□□□□□ -0.45
ATXN3-230ENST00000554673 SAMD1Q6SPF0 538 aaPredicted RBP12.18□□□□□ -0.46
ATXN3-230ENST00000554673 CCDC180Q9P1Z9 1646 aa12.15□□□□□ -0.46
ATXN3-230ENST00000554673 RBM42Q9BTD8 480 aaKnown RBP12.06□□□□□ -0.48
ATXN3-230ENST00000554673 POLA2Q14181 598 aa12.01□□□□□ -0.49
ATXN3-230ENST00000554673 MYCNP04198 464 aaPredicted RBP11.98□□□□□ -0.49
ATXN3-230ENST00000554673 CHRDL2Q6WN34 429 aa11.93□□□□□ -0.5
ATXN3-230ENST00000554673 ATF5Q9Y2D1 282 aaPredicted RBP11.77□□□□□ -0.53
ATXN3-230ENST00000554673 SLC4A1APQ9BWU0 796 aaKnown RBP11.73□□□□□ -0.53
ATXN3-230ENST00000554673 AKT1S1Q96B36 256 aa11.7□□□□□ -0.54
ATXN3-230ENST00000554673 EHMT2Q96KQ7 1210 aa11.7□□□□□ -0.54
ATXN3-230ENST00000554673 FOXD4L1Q9NU39 408 aa11.7□□□□□ -0.54
ATXN3-230ENST00000554673 ZCCHC6Q5VYS8 1495 aaKnown RBP11.69□□□□□ -0.54
ATXN3-230ENST00000554673 ZBTB12Q9Y330 459 aaPredicted RBP11.68□□□□□ -0.54
ATXN3-230ENST00000554673 OSCARQ8IYS5 282 aa11.66□□□□□ -0.54
ATXN3-230ENST00000554673 REM2Q8IYK8 340 aaPredicted RBP11.63□□□□□ -0.55
ATXN3-230ENST00000554673 SP7Q8TDD2 431 aaPredicted RBP11.63□□□□□ -0.55
ATXN3-230ENST00000554673 PIP4P2Q8N4L2 257 aa11.59□□□□□ -0.55
ATXN3-230ENST00000554673 HAX1O00165 279 aa11.52□□□□□ -0.57
ATXN3-230ENST00000554673 PITPNM1O00562 1244 aa11.52□□□□□ -0.57
ATXN3-230ENST00000554673 ABCC9O60706 1549 aa11.5□□□□□ -0.57
ATXN3-230ENST00000554673 ZBTB22O15209 634 aa11.44□□□□□ -0.58
ATXN3-230ENST00000554673 DCAF1Q9Y4B6 1507 aa11.44□□□□□ -0.58
ATXN3-230ENST00000554673 FXR2P51116 673 aaKnown RBP eCLIP11.43□□□□□ -0.58
ATXN3-230ENST00000554673 FBLN2P98095 1184 aa11.33□□□□□ -0.6
ATXN3-230ENST00000554673 EVX2Q03828 476 aa11.31□□□□□ -0.6
ATXN3-230ENST00000554673 SPDYE2BA6NHP3 402 aa11.3□□□□□ -0.6
ATXN3-230ENST00000554673 SPDYE6P0CI01 402 aa11.3□□□□□ -0.6
ATXN3-230ENST00000554673 ATXN8OSP0DMR3 200 aa11.3□□□□□ -0.6
ATXN3-230ENST00000554673 SPDYE2Q495Y8 402 aa11.3□□□□□ -0.6
ATXN3-230ENST00000554673 CLEC11AQ9Y240 323 aa11.3□□□□□ -0.6
ATXN3-230ENST00000554673 MYO15BQ96JP2 1530 aa11.3□□□□□ -0.6
ATXN3-230ENST00000554673 CSRNP3Q8WYN3 585 aa11.29□□□□□ -0.6
ATXN3-230ENST00000554673 UNC13AQ9UPW8 1703 aa11.26□□□□□ -0.61
ATXN3-230ENST00000554673 PRKAR2AP13861 404 aaKnown RBP11.25□□□□□ -0.61
ATXN3-230ENST00000554673 NACADO15069 1562 aa11.23□□□□□ -0.61
ATXN3-230ENST00000554673 SHROOM4Q9ULL8 1493 aa11.22□□□□□ -0.61
ATXN3-230ENST00000554673 SPDYE1Q8NFV5 336 aaPredicted RBP11.2□□□□□ -0.62
ATXN3-230ENST00000554673 ZNF692Q9BU19 519 aaPredicted RBP11.19□□□□□ -0.62
ATXN3-230ENST00000554673 SCRIBQ14160 1630 aa11.18□□□□□ -0.62
ATXN3-230ENST00000554673 DCAF8L2P0C7V8 631 aa11.17□□□□□ -0.62
ATXN3-230ENST00000554673 MKRN4PQ13434 485 aaPredicted RBP11.17□□□□□ -0.62
ATXN3-230ENST00000554673 RB1CC1Q8TDY2 1594 aa11.13□□□□□ -0.63
ATXN3-230ENST00000554673 CHADLQ6NUI6 762 aa11.1□□□□□ -0.63
ATXN3-230ENST00000554673 SSUH2Q9Y2M2 353 aa11.09□□□□□ -0.63
ATXN3-230ENST00000554673 C19orf67A6NJJ6 358 aa11.08□□□□□ -0.64
ATXN3-230ENST00000554673 BICRAQ9NZM4 1560 aa11.07□□□□□ -0.64
ATXN3-230ENST00000554673 GABBR2O75899 941 aa11.03□□□□□ -0.64
ATXN3-230ENST00000554673 PRR29P0C7W0 189 aa11.02□□□□□ -0.65
ATXN3-230ENST00000554673 PABPN1Q86U42 306 aaKnown RBP eCLIP11.01□□□□□ -0.65
ATXN3-230ENST00000554673 LHX8Q68G74 356 aa10.93□□□□□ -0.66
ATXN3-230ENST00000554673 SLC24A1O60721 1099 aa10.9□□□□□ -0.66
ATXN3-230ENST00000554673 CECR2Q9BXF3 1484 aa10.89□□□□□ -0.67
ATXN3-230ENST00000554673 CD44P16070 742 aaKnown RBP10.87□□□□□ -0.67
ATXN3-230ENST00000554673 FARP1Q9Y4F1 1045 aaPredicted RBP10.83□□□□□ -0.68
ATXN3-230ENST00000554673 MROH2BQ7Z745 1585 aa10.81□□□□□ -0.68
ATXN3-230ENST00000554673 POTEIP0CG38 1075 aa10.77□□□□□ -0.69
ATXN3-230ENST00000554673 RSF1Q96T23 1441 aaPredicted RBP10.75□□□□□ -0.69
ATXN3-230ENST00000554673 WIZO95785 1651 aa10.74□□□□□ -0.69
ATXN3-230ENST00000554673 SMARCA4P51532 1647 aa10.73□□□□□ -0.69
ATXN3-230ENST00000554673 DCBLD2Q96PD2 775 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 662.4 ms