RNA–Protein interactions for RNA: ENST00000515746.5

ATXN3-212, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-212ENST00000515746 AEBP2Q6ZN18 517 aaPredicted RBP14.19□□□□□ -0.14
ATXN3-212ENST00000515746 CHIC1Q5VXU3 224 aa13.99□□□□□ -0.17
ATXN3-212ENST00000515746 PHF23Q9BUL5 403 aaPredicted RBP12.32□□□□□ -0.44
ATXN3-212ENST00000515746 SENP3Q9H4L4 574 aaPredicted RBP12.02□□□□□ -0.49
ATXN3-212ENST00000515746 POTEDQ86YR6 584 aa11.5□□□□□ -0.57
ATXN3-212ENST00000515746 PLPPR3Q6T4P5 718 aa11.43□□□□□ -0.58
ATXN3-212ENST00000515746 FOXD1Q16676 465 aa11.15□□□□□ -0.62
ATXN3-212ENST00000515746 PPP6R1Q9UPN7 881 aa10.84□□□□□ -0.67
ATXN3-212ENST00000515746 ADRA2BP18089 450 aa10.83□□□□□ -0.68
ATXN3-212ENST00000515746 PIAS4Q8N2W9 510 aaPredicted RBP10.54□□□□□ -0.72
ATXN3-212ENST00000515746 MSH5O43196 834 aa10.38□□□□□ -0.75
ATXN3-212ENST00000515746 PPP4R3CPQ6ZMV5 832 aa10.08□□□□□ -0.8
ATXN3-212ENST00000515746 NISCHQ9Y2I1 1504 aa10.05□□□□□ -0.8
ATXN3-212ENST00000515746 KCNA4P22459 653 aa9.98□□□□□ -0.81
ATXN3-212ENST00000515746 SCAF1Q9H7N4 1312 aaKnown RBP9.93□□□□□ -0.82
ATXN3-212ENST00000515746 NCBP3Q53F19 620 aaKnown RBP9.86□□□□□ -0.83
ATXN3-212ENST00000515746 MAPK8IP2Q13387 824 aaPredicted RBP9.8□□□□□ -0.84
ATXN3-212ENST00000515746 CNKSR2Q8WXI2 1034 aa9.78□□□□□ -0.84
ATXN3-212ENST00000515746 NPM3O75607 178 aaKnown RBP9.7□□□□□ -0.86
ATXN3-212ENST00000515746 DMRT2Q9Y5R5 561 aa9.61□□□□□ -0.87
ATXN3-212ENST00000515746 RNF216Q9NWF9 866 aaPredicted RBP9.55□□□□□ -0.88
ATXN3-212ENST00000515746 SLC4A1APQ9BWU0 796 aaKnown RBP9.54□□□□□ -0.88
ATXN3-212ENST00000515746 HOXD11P31277 338 aaPredicted RBP9.47□□□□□ -0.89
ATXN3-212ENST00000515746 CACNB1Q02641 598 aaPredicted RBP9.43□□□□□ -0.9
ATXN3-212ENST00000515746 EHMT2Q96KQ7 1210 aa9.41□□□□□ -0.9
ATXN3-212ENST00000515746 DNAJC5BQ9UF47 199 aa9.39□□□□□ -0.91
ATXN3-212ENST00000515746 CSRNP3Q8WYN3 585 aa9.25□□□□□ -0.93
ATXN3-212ENST00000515746 DCAF8L1A6NGE4 600 aa9.21□□□□□ -0.94
ATXN3-212ENST00000515746 ZBTB22O15209 634 aa9.18□□□□□ -0.94
ATXN3-212ENST00000515746 FOXD4L1Q9NU39 408 aa9.15□□□□□ -0.94
ATXN3-212ENST00000515746 SLC4A2P04920 1241 aa9.13□□□□□ -0.95
ATXN3-212ENST00000515746 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.04□□□□□ -0.96
ATXN3-212ENST00000515746 MYCNP04198 464 aaPredicted RBP8.96□□□□□ -0.98
ATXN3-212ENST00000515746 U3KPZ7 1027 aaPredicted RBP8.89□□□□□ -0.99
ATXN3-212ENST00000515746 RNF39Q9H2S5 420 aa8.86□□□□□ -0.99
ATXN3-212ENST00000515746 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.84□□□□□ -0.99
ATXN3-212ENST00000515746 HNRNPUL2Q1KMD3 747 aaKnown RBP8.84□□□□□ -0.99
ATXN3-212ENST00000515746 POTEHQ6S545 545 aa8.84□□□□□ -0.99
ATXN3-212ENST00000515746 ATXN8OSP0DMR3 200 aa8.83□□□□□ -1
ATXN3-212ENST00000515746 SAMD1Q6SPF0 538 aaPredicted RBP8.8□□□□□ -1
ATXN3-212ENST00000515746 ATF5Q9Y2D1 282 aaPredicted RBP8.72□□□□□ -1.01
ATXN3-212ENST00000515746 APLP2Q06481 763 aa8.71□□□□□ -1.02
ATXN3-212ENST00000515746 C1QBPQ07021 282 aaKnown RBP8.68□□□□□ -1.02
ATXN3-212ENST00000515746 SPINK5Q9NQ38 1064 aaPredicted RBP8.61□□□□□ -1.03
ATXN3-212ENST00000515746 CAPN15O75808 1086 aa8.58□□□□□ -1.04
ATXN3-212ENST00000515746 ZNF219Q9P2Y4 722 aaPredicted RBP8.58□□□□□ -1.04
ATXN3-212ENST00000515746 TRHP20396 242 aaPredicted RBP8.57□□□□□ -1.04
ATXN3-212ENST00000515746 ZCCHC6Q5VYS8 1495 aaKnown RBP8.55□□□□□ -1.04
ATXN3-212ENST00000515746 SHROOM4Q9ULL8 1493 aa8.52□□□□□ -1.05
ATXN3-212ENST00000515746 CCDC180Q9P1Z9 1646 aa8.47□□□□□ -1.05
ATXN3-212ENST00000515746 POLA2Q14181 598 aa8.47□□□□□ -1.05
ATXN3-212ENST00000515746 ABCB7O75027 752 aa8.42□□□□□ -1.06
ATXN3-212ENST00000515746 SUPT5HO00267 1087 aaKnown RBP8.41□□□□□ -1.06
ATXN3-212ENST00000515746 DSG3P32926 999 aa8.4□□□□□ -1.06
ATXN3-212ENST00000515746 MYO15BQ96JP2 1530 aa8.37□□□□□ -1.07
ATXN3-212ENST00000515746 FKBP8Q14318 412 aa8.35□□□□□ -1.07
ATXN3-212ENST00000515746 FBLN2P98095 1184 aa8.34□□□□□ -1.07
ATXN3-212ENST00000515746 MKRN4PQ13434 485 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-212ENST00000515746 HRCP23327 699 aa8.32□□□□□ -1.08
ATXN3-212ENST00000515746 ZBTB12Q9Y330 459 aaPredicted RBP8.32□□□□□ -1.08
ATXN3-212ENST00000515746 DCAF1Q9Y4B6 1507 aa8.31□□□□□ -1.08
ATXN3-212ENST00000515746 SPDYE4A6NLX3 237 aa8.23□□□□□ -1.09
ATXN3-212ENST00000515746 OSCARQ8IYS5 282 aa8.15□□□□□ -1.1
ATXN3-212ENST00000515746 PCGF6Q9BYE7 350 aa8.13□□□□□ -1.11
ATXN3-212ENST00000515746 ZNF692Q9BU19 519 aaPredicted RBP8.12□□□□□ -1.11
ATXN3-212ENST00000515746 SPDYE2BA6NHP3 402 aa8.11□□□□□ -1.11
ATXN3-212ENST00000515746 SPDYE6P0CI01 402 aa8.11□□□□□ -1.11
ATXN3-212ENST00000515746 SPDYE2Q495Y8 402 aa8.11□□□□□ -1.11
ATXN3-212ENST00000515746 PROM2Q8N271 834 aa8.09□□□□□ -1.11
ATXN3-212ENST00000515746 ABCC9O60706 1549 aa8.08□□□□□ -1.12
ATXN3-212ENST00000515746 DCAF8L2P0C7V8 631 aa8.08□□□□□ -1.12
ATXN3-212ENST00000515746 PPARGC1BQ86YN6 1023 aaKnown RBP8.05□□□□□ -1.12
ATXN3-212ENST00000515746 SSUH2Q9Y2M2 353 aa8.05□□□□□ -1.12
ATXN3-212ENST00000515746 LOC105371045A0A1W2PR82 267 aa8.04□□□□□ -1.12
ATXN3-212ENST00000515746 FBXO3Q9UK99 471 aa8.03□□□□□ -1.12
ATXN3-212ENST00000515746 RSF1Q96T23 1441 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-212ENST00000515746 TRIM26Q12899 539 aaPredicted RBP8□□□□□ -1.13
ATXN3-212ENST00000515746 PABPN1Q86U42 306 aaKnown RBP eCLIP8□□□□□ -1.13
ATXN3-212ENST00000515746 RBM42Q9BTD8 480 aaKnown RBP8□□□□□ -1.13
ATXN3-212ENST00000515746 SP7Q8TDD2 431 aaPredicted RBP7.93□□□□□ -1.14
ATXN3-212ENST00000515746 AKT1S1Q96B36 256 aa7.93□□□□□ -1.14
ATXN3-212ENST00000515746 RB1CC1Q8TDY2 1594 aa7.93□□□□□ -1.14
ATXN3-212ENST00000515746 SCRIBQ14160 1630 aa7.9□□□□□ -1.14
ATXN3-212ENST00000515746 ZEB1P37275 1124 aaPredicted RBP7.9□□□□□ -1.14
ATXN3-212ENST00000515746 STAG3Q9UJ98 1225 aa7.9□□□□□ -1.14
ATXN3-212ENST00000515746 VASPP50552 380 aaPredicted RBP7.89□□□□□ -1.15
ATXN3-212ENST00000515746 REM2Q8IYK8 340 aaPredicted RBP7.86□□□□□ -1.15
ATXN3-212ENST00000515746 TRIM41Q8WV44 630 aa7.86□□□□□ -1.15
ATXN3-212ENST00000515746 AMER1Q5JTC6 1135 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-212ENST00000515746 SPDYE1Q8NFV5 336 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-212ENST00000515746 CHRDL2Q6WN34 429 aa7.82□□□□□ -1.16
ATXN3-212ENST00000515746 IFNLR1Q8IU57 520 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-212ENST00000515746 CLEC11AQ9Y240 323 aa7.82□□□□□ -1.16
ATXN3-212ENST00000515746 NACADO15069 1562 aa7.81□□□□□ -1.16
ATXN3-212ENST00000515746 MIER1Q8N108 512 aa7.81□□□□□ -1.16
ATXN3-212ENST00000515746 CECR2Q9BXF3 1484 aa7.81□□□□□ -1.16
ATXN3-212ENST00000515746 MROH2BQ7Z745 1585 aa7.8□□□□□ -1.16
ATXN3-212ENST00000515746 PLCD3Q8N3E9 789 aa7.8□□□□□ -1.16
ATXN3-212ENST00000515746 RTN4Q9NQC3 1192 aaKnown RBP7.8□□□□□ -1.16
ATXN3-212ENST00000515746 EIF4G1Q04637 1599 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 221.7 ms