RNA–Protein interactions for RNA: ENST00000511362.5

ATXN3-211, Transcript of ataxin 3, humanhuman

TSL 3

Gene ATXN3, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-211ENST00000511362 AEBP2Q6ZN18 517 aaPredicted RBP23.76■■□□□ 1.39
ATXN3-211ENST00000511362 CHIC1Q5VXU3 224 aa22.17■■□□□ 1.14
ATXN3-211ENST00000511362 SENP3Q9H4L4 574 aaPredicted RBP20.35■□□□□ 0.85
ATXN3-211ENST00000511362 PHF23Q9BUL5 403 aaPredicted RBP20■□□□□ 0.79
ATXN3-211ENST00000511362 FOXD1Q16676 465 aa19.07■□□□□ 0.64
ATXN3-211ENST00000511362 POTEDQ86YR6 584 aa18.84■□□□□ 0.61
ATXN3-211ENST00000511362 MSH5O43196 834 aa18.09■□□□□ 0.49
ATXN3-211ENST00000511362 PIAS4Q8N2W9 510 aaPredicted RBP17.65■□□□□ 0.42
ATXN3-211ENST00000511362 PPP6R1Q9UPN7 881 aa17.31■□□□□ 0.36
ATXN3-211ENST00000511362 ADRA2BP18089 450 aa17.23■□□□□ 0.35
ATXN3-211ENST00000511362 PLPPR3Q6T4P5 718 aa17.16■□□□□ 0.34
ATXN3-211ENST00000511362 DMRT2Q9Y5R5 561 aa16.04■□□□□ 0.16
ATXN3-211ENST00000511362 MAPK8IP2Q13387 824 aaPredicted RBP16.03■□□□□ 0.16
ATXN3-211ENST00000511362 CACNB1Q02641 598 aaPredicted RBP15.96■□□□□ 0.15
ATXN3-211ENST00000511362 SCAF1Q9H7N4 1312 aaKnown RBP15.72■□□□□ 0.11
ATXN3-211ENST00000511362 DCAF8L1A6NGE4 600 aa15.45■□□□□ 0.06
ATXN3-211ENST00000511362 RNF39Q9H2S5 420 aa15.38■□□□□ 0.05
ATXN3-211ENST00000511362 HOXD11P31277 338 aaPredicted RBP15.17■□□□□ 0.02
ATXN3-211ENST00000511362 C1QBPQ07021 282 aaKnown RBP15.1■□□□□ 0.01
ATXN3-211ENST00000511362 PPP4R3CPQ6ZMV5 832 aa14.97□□□□□ -0.01
ATXN3-211ENST00000511362 RNF216Q9NWF9 866 aaPredicted RBP14.87□□□□□ -0.03
ATXN3-211ENST00000511362 CNKSR2Q8WXI2 1034 aa14.84□□□□□ -0.03
ATXN3-211ENST00000511362 DNAJC5BQ9UF47 199 aa14.75□□□□□ -0.05
ATXN3-211ENST00000511362 POTEHQ6S545 545 aa14.62□□□□□ -0.07
ATXN3-211ENST00000511362 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.47□□□□□ -0.09
ATXN3-211ENST00000511362 DSG3P32926 999 aa14.18□□□□□ -0.14
ATXN3-211ENST00000511362 NCBP3Q53F19 620 aaKnown RBP14.17□□□□□ -0.14
ATXN3-211ENST00000511362 CAPN15O75808 1086 aa14.11□□□□□ -0.15
ATXN3-211ENST00000511362 SPINK5Q9NQ38 1064 aaPredicted RBP14.11□□□□□ -0.15
ATXN3-211ENST00000511362 U3KPZ7 1027 aaPredicted RBP14.09□□□□□ -0.15
ATXN3-211ENST00000511362 NPM3O75607 178 aaKnown RBP13.99□□□□□ -0.17
ATXN3-211ENST00000511362 ABCB7O75027 752 aa13.73□□□□□ -0.21
ATXN3-211ENST00000511362 TRHP20396 242 aaPredicted RBP13.72□□□□□ -0.21
ATXN3-211ENST00000511362 ZNF219Q9P2Y4 722 aaPredicted RBP13.64□□□□□ -0.23
ATXN3-211ENST00000511362 APLP2Q06481 763 aa13.59□□□□□ -0.23
ATXN3-211ENST00000511362 SLC4A2P04920 1241 aa13.54□□□□□ -0.24
ATXN3-211ENST00000511362 RBM42Q9BTD8 480 aaKnown RBP13.53□□□□□ -0.24
ATXN3-211ENST00000511362 CHRDL2Q6WN34 429 aa13.52□□□□□ -0.25
ATXN3-211ENST00000511362 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.42□□□□□ -0.26
ATXN3-211ENST00000511362 HNRNPUL2Q1KMD3 747 aaKnown RBP13.42□□□□□ -0.26
ATXN3-211ENST00000511362 SP7Q8TDD2 431 aaPredicted RBP13.38□□□□□ -0.27
ATXN3-211ENST00000511362 SAMD1Q6SPF0 538 aaPredicted RBP13.32□□□□□ -0.28
ATXN3-211ENST00000511362 POLA2Q14181 598 aa13.19□□□□□ -0.3
ATXN3-211ENST00000511362 KCNA4P22459 653 aa13.12□□□□□ -0.31
ATXN3-211ENST00000511362 AKT1S1Q96B36 256 aa13.08□□□□□ -0.32
ATXN3-211ENST00000511362 PIP4P2Q8N4L2 257 aa13.06□□□□□ -0.32
ATXN3-211ENST00000511362 HAX1O00165 279 aa13.01□□□□□ -0.33
ATXN3-211ENST00000511362 REM2Q8IYK8 340 aaPredicted RBP12.98□□□□□ -0.33
ATXN3-211ENST00000511362 MYCNP04198 464 aaPredicted RBP12.94□□□□□ -0.34
ATXN3-211ENST00000511362 FXR2P51116 673 aaKnown RBP eCLIP12.86□□□□□ -0.35
ATXN3-211ENST00000511362 PITPNM1O00562 1244 aa12.85□□□□□ -0.35
ATXN3-211ENST00000511362 ZBTB12Q9Y330 459 aaPredicted RBP12.84□□□□□ -0.35
ATXN3-211ENST00000511362 EVX2Q03828 476 aa12.81□□□□□ -0.36
ATXN3-211ENST00000511362 OSCARQ8IYS5 282 aa12.8□□□□□ -0.36
ATXN3-211ENST00000511362 ATF5Q9Y2D1 282 aaPredicted RBP12.72□□□□□ -0.37
ATXN3-211ENST00000511362 LHX8Q68G74 356 aa12.55□□□□□ -0.4
ATXN3-211ENST00000511362 PRKAR2AP13861 404 aaKnown RBP12.51□□□□□ -0.41
ATXN3-211ENST00000511362 C19orf67A6NJJ6 358 aa12.48□□□□□ -0.41
ATXN3-211ENST00000511362 GABBR2O75899 941 aa12.46□□□□□ -0.41
ATXN3-211ENST00000511362 FOXD4L1Q9NU39 408 aa12.43□□□□□ -0.42
ATXN3-211ENST00000511362 SPDYE2BA6NHP3 402 aa12.4□□□□□ -0.42
ATXN3-211ENST00000511362 SPDYE6P0CI01 402 aa12.4□□□□□ -0.42
ATXN3-211ENST00000511362 SPDYE2Q495Y8 402 aa12.4□□□□□ -0.42
ATXN3-211ENST00000511362 CLEC11AQ9Y240 323 aa12.39□□□□□ -0.43
ATXN3-211ENST00000511362 SPDYE1Q8NFV5 336 aaPredicted RBP12.35□□□□□ -0.43
ATXN3-211ENST00000511362 PLSCR2Q9NRY7 297 aa12.34□□□□□ -0.43
ATXN3-211ENST00000511362 FBLN2P98095 1184 aa12.25□□□□□ -0.45
ATXN3-211ENST00000511362 SLC4A1APQ9BWU0 796 aaKnown RBP12.24□□□□□ -0.45
ATXN3-211ENST00000511362 CHADLQ6NUI6 762 aa12.23□□□□□ -0.45
ATXN3-211ENST00000511362 POTEIP0CG38 1075 aa12.21□□□□□ -0.45
ATXN3-211ENST00000511362 ZNF692Q9BU19 519 aaPredicted RBP12.15□□□□□ -0.46
ATXN3-211ENST00000511362 SSUH2Q9Y2M2 353 aa12.15□□□□□ -0.46
ATXN3-211ENST00000511362 ATXN8OSP0DMR3 200 aa12.11□□□□□ -0.47
ATXN3-211ENST00000511362 MKRN4PQ13434 485 aaPredicted RBP12.09□□□□□ -0.47
ATXN3-211ENST00000511362 PRR29P0C7W0 189 aa12.07□□□□□ -0.48
ATXN3-211ENST00000511362 CD44P16070 742 aaKnown RBP12.07□□□□□ -0.48
ATXN3-211ENST00000511362 ZBTB22O15209 634 aa12.05□□□□□ -0.48
ATXN3-211ENST00000511362 CLCN6P51797 869 aa11.99□□□□□ -0.49
ATXN3-211ENST00000511362 DCBLD2Q96PD2 775 aa11.98□□□□□ -0.49
ATXN3-211ENST00000511362 FARP1Q9Y4F1 1045 aaPredicted RBP11.97□□□□□ -0.49
ATXN3-211ENST00000511362 PABPN1Q86U42 306 aaKnown RBP eCLIP11.96□□□□□ -0.49
ATXN3-211ENST00000511362 OTUD5Q96G74 571 aa11.88□□□□□ -0.51
ATXN3-211ENST00000511362 POTEMA6NI47 508 aa11.86□□□□□ -0.51
ATXN3-211ENST00000511362 ZNF579Q8NAF0 562 aaKnown RBP11.84□□□□□ -0.51
ATXN3-211ENST00000511362 POTEGQ6S5H5 508 aa11.8□□□□□ -0.52
ATXN3-211ENST00000511362 ZRANB1Q9UGI0 708 aa11.8□□□□□ -0.52
ATXN3-211ENST00000511362 POTEB2H3BUK9 544 aa11.79□□□□□ -0.52
ATXN3-211ENST00000511362 GALR2O43603 387 aaPredicted RBP11.76□□□□□ -0.53
ATXN3-211ENST00000511362 PCDH10Q9P2E7 1040 aa11.66□□□□□ -0.54
ATXN3-211ENST00000511362 CREBZFQ9NS37 354 aa11.62□□□□□ -0.55
ATXN3-211ENST00000511362 PELP1Q8IZL8 1130 aaKnown RBP11.6□□□□□ -0.55
ATXN3-211ENST00000511362 PHF12Q96QT6 1004 aa11.59□□□□□ -0.55
ATXN3-211ENST00000511362 PAK3O75914 559 aaPredicted RBP11.53□□□□□ -0.56
ATXN3-211ENST00000511362 POTEJP0CG39 1038 aa11.51□□□□□ -0.57
ATXN3-211ENST00000511362 METRNQ9UJH8 293 aa11.51□□□□□ -0.57
ATXN3-211ENST00000511362 LCE2DQ5TA82 110 aaPredicted RBP11.49□□□□□ -0.57
ATXN3-211ENST00000511362 FAM163AQ96GL9 167 aaPredicted RBP11.46□□□□□ -0.57
ATXN3-211ENST00000511362 ASTLQ6HA08 431 aaPredicted RBP11.45□□□□□ -0.58
ATXN3-211ENST00000511362 MAMSTRQ6ZN01 415 aa11.45□□□□□ -0.58
ATXN3-211ENST00000511362 SLC39A7Q92504 469 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 179.7 ms