RNA–Protein interactions for RNA: ENST00000513134.5

TMA16-208, Transcript of translation machinery associated 16 homolog, humanhuman

TSL 3 BASIC

Gene TMA16, Length 747 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMA16-208ENST00000513134 NISCHQ9Y2I1 1504 aa27.74■■■□□ 2.03
TMA16-208ENST00000513134 CCDC180Q9P1Z9 1646 aa24.44■■□□□ 1.5
TMA16-208ENST00000513134 ABCC9O60706 1549 aa23.84■■□□□ 1.41
TMA16-208ENST00000513134 ZCCHC6Q5VYS8 1495 aaKnown RBP23.12■■□□□ 1.29
TMA16-208ENST00000513134 DCAF8L2P0C7V8 631 aa23.08■■□□□ 1.29
TMA16-208ENST00000513134 MYO15BQ96JP2 1530 aa23.06■■□□□ 1.28
TMA16-208ENST00000513134 NACADO15069 1562 aa23.06■■□□□ 1.28
TMA16-208ENST00000513134 DCAF1Q9Y4B6 1507 aa22.99■■□□□ 1.27
TMA16-208ENST00000513134 RB1CC1Q8TDY2 1594 aa22.98■■□□□ 1.27
TMA16-208ENST00000513134 PABPN1Q86U42 306 aaKnown RBP eCLIP22.4■■□□□ 1.18
TMA16-208ENST00000513134 BICRAQ9NZM4 1560 aa22.33■■□□□ 1.17
TMA16-208ENST00000513134 SCRIBQ14160 1630 aa22.31■■□□□ 1.16
TMA16-208ENST00000513134 UNC13AQ9UPW8 1703 aa22.3■■□□□ 1.16
TMA16-208ENST00000513134 SHROOM4Q9ULL8 1493 aa22.15■■□□□ 1.14
TMA16-208ENST00000513134 AEBP2Q6ZN18 517 aaPredicted RBP22.03■■□□□ 1.12
TMA16-208ENST00000513134 DNAJC5BQ9UF47 199 aa21.91■■□□□ 1.1
TMA16-208ENST00000513134 EIF4G1Q04637 1599 aaKnown RBP21.7■■□□□ 1.06
TMA16-208ENST00000513134 CECR2Q9BXF3 1484 aa21.61■■□□□ 1.05
TMA16-208ENST00000513134 CC2D2AQ9P2K1 1620 aa21.55■■□□□ 1.04
TMA16-208ENST00000513134 BAZ1AQ9NRL2 1556 aaPredicted RBP21.44■■□□□ 1.02
TMA16-208ENST00000513134 SMARCA4P51532 1647 aa21.4■■□□□ 1.02
TMA16-208ENST00000513134 NCAPD3P42695 1498 aa21.37■■□□□ 1.01
TMA16-208ENST00000513134 MROH2BQ7Z745 1585 aa21.36■■□□□ 1.01
TMA16-208ENST00000513134 ATAD2BQ9ULI0 1458 aa21.36■■□□□ 1.01
TMA16-208ENST00000513134 PEG3Q9GZU2 1588 aa21.27■■□□□ 1
TMA16-208ENST00000513134 SMARCA2P51531 1590 aa21.26■□□□□ 0.99
TMA16-208ENST00000513134 RSF1Q96T23 1441 aaPredicted RBP21.25■□□□□ 0.99
TMA16-208ENST00000513134 HMGXB3Q12766 1538 aa21.17■□□□□ 0.98
TMA16-208ENST00000513134 CHIC1Q5VXU3 224 aa21.12■□□□□ 0.97
TMA16-208ENST00000513134 BAZ1BQ9UIG0 1483 aaKnown RBP21.12■□□□□ 0.97
TMA16-208ENST00000513134 WIZO95785 1651 aa21.04■□□□□ 0.96
TMA16-208ENST00000513134 TOP2AP11388 1531 aaKnown RBP20.88■□□□□ 0.93
TMA16-208ENST00000513134 SUPT5HO00267 1087 aaKnown RBP20.75■□□□□ 0.91
TMA16-208ENST00000513134 CADPSQ9ULU8 1353 aa20.74■□□□□ 0.91
TMA16-208ENST00000513134 CCDC88BA6NC98 1476 aa20.71■□□□□ 0.91
TMA16-208ENST00000513134 NESP48681 1621 aa20.7■□□□□ 0.9
TMA16-208ENST00000513134 LAMC3Q9Y6N6 1575 aa20.64■□□□□ 0.9
TMA16-208ENST00000513134 CFTRP13569 1480 aa20.63■□□□□ 0.89
TMA16-208ENST00000513134 PDS5BQ9NTI5 1447 aa20.58■□□□□ 0.88
TMA16-208ENST00000513134 ERCC6Q03468 1493 aa20.5■□□□□ 0.87
TMA16-208ENST00000513134 FANCD2Q9BXW9 1451 aa20.43■□□□□ 0.86
TMA16-208ENST00000513134 CEP164Q9UPV0 1460 aa20.35■□□□□ 0.85
TMA16-208ENST00000513134 MRC2Q9UBG0 1479 aa20.31■□□□□ 0.84
TMA16-208ENST00000513134 CUX2O14529 1486 aa20.3■□□□□ 0.84
TMA16-208ENST00000513134 KIF21AQ7Z4S6 1674 aa20.29■□□□□ 0.84
TMA16-208ENST00000513134 THOC2Q8NI27 1593 aaKnown RBP20.29■□□□□ 0.84
TMA16-208ENST00000513134 WDR62O43379 1518 aa20.23■□□□□ 0.83
TMA16-208ENST00000513134 URB2Q14146 1524 aaKnown RBP20.22■□□□□ 0.83
TMA16-208ENST00000513134 PRDM2Q13029 1718 aa20.18■□□□□ 0.82
TMA16-208ENST00000513134 ABCC8Q09428 1581 aa20.14■□□□□ 0.81
TMA16-208ENST00000513134 TOPBP1Q92547 1522 aa20.11■□□□□ 0.81
TMA16-208ENST00000513134 DNMBPQ6XZF7 1577 aa20.06■□□□□ 0.8
TMA16-208ENST00000513134 CUX1P39880 1505 aa20.02■□□□□ 0.8
TMA16-208ENST00000513134 WRNQ14191 1432 aaPredicted RBP eCLIP19.98■□□□□ 0.79
TMA16-208ENST00000513134 POLA1P09884 1462 aaPredicted RBP19.96■□□□□ 0.79
TMA16-208ENST00000513134 IFT140Q96RY7 1462 aa19.96■□□□□ 0.79
TMA16-208ENST00000513134 SOGA1O94964 1423 aa19.92■□□□□ 0.78
TMA16-208ENST00000513134 FGD5Q6ZNL6 1462 aa19.92■□□□□ 0.78
TMA16-208ENST00000513134 RAD54L2Q9Y4B4 1467 aa19.87■□□□□ 0.77
TMA16-208ENST00000513134 TOP2BQ02880 1626 aa19.86■□□□□ 0.77
TMA16-208ENST00000513134 ZNF608Q9ULD9 1512 aaPredicted RBP19.86■□□□□ 0.77
TMA16-208ENST00000513134 TARBP1Q13395 1621 aaKnown RBP19.85■□□□□ 0.77
TMA16-208ENST00000513134 SYNJ1O43426 1573 aa19.85■□□□□ 0.77
TMA16-208ENST00000513134 BIVM-ERCC5R4GMW8 1640 aa19.8■□□□□ 0.76
TMA16-208ENST00000513134 TDRD9Q8NDG6 1382 aaKnown RBP19.79■□□□□ 0.76
TMA16-208ENST00000513134 AQRO60306 1485 aaKnown RBP eCLIP19.79■□□□□ 0.765e-7■■■■□ 21
TMA16-208ENST00000513134 ABCA10Q8WWZ4 1543 aa19.77■□□□□ 0.76
TMA16-208ENST00000513134 WDR97A6NE52 1622 aa19.69■□□□□ 0.74
TMA16-208ENST00000513134 EIF4G3O43432 1585 aaKnown RBP19.67■□□□□ 0.74
TMA16-208ENST00000513134 GAPVD1Q14C86 1478 aa19.66■□□□□ 0.74
TMA16-208ENST00000513134 GRIN2BQ13224 1484 aa19.64■□□□□ 0.73
TMA16-208ENST00000513134 TRIM41Q8WV44 630 aa19.63■□□□□ 0.73
TMA16-208ENST00000513134 DNAJC5Q9H3Z4 198 aa19.6■□□□□ 0.73
TMA16-208ENST00000513134 ABCA5Q8WWZ7 1642 aa19.59■□□□□ 0.73
TMA16-208ENST00000513134 OSCARQ8IYS5 282 aa19.56■□□□□ 0.72
TMA16-208ENST00000513134 MAGI1Q96QZ7 1491 aaPredicted RBP19.55■□□□□ 0.72
TMA16-208ENST00000513134 KIF27Q86VH2 1401 aa19.55■□□□□ 0.72
TMA16-208ENST00000513134 IGF1RP08069 1367 aa19.55■□□□□ 0.72
TMA16-208ENST00000513134 SNAPC4Q5SXM2 1469 aa19.54■□□□□ 0.72
TMA16-208ENST00000513134 ERICH3Q5RHP9 1530 aa19.51■□□□□ 0.71
TMA16-208ENST00000513134 SYNJ2O15056 1496 aa19.49■□□□□ 0.71
TMA16-208ENST00000513134 CHMP7Q8WUX9 453 aaPredicted RBP19.49■□□□□ 0.71
TMA16-208ENST00000513134 FBLN2P98095 1184 aa19.47■□□□□ 0.71
TMA16-208ENST00000513134 FHAD1B1AJZ9 1412 aa19.46■□□□□ 0.71
TMA16-208ENST00000513134 RUSC2Q8N2Y8 1516 aa19.42■□□□□ 0.7
TMA16-208ENST00000513134 PBRM1Q86U86 1689 aa19.4■□□□□ 0.7
TMA16-208ENST00000513134 ADAMTS12P58397 1594 aa19.38■□□□□ 0.69
TMA16-208ENST00000513134 GRIN2AQ12879 1464 aa19.37■□□□□ 0.69
TMA16-208ENST00000513134 CARMIL1Q5VZK9 1371 aa19.36■□□□□ 0.69
TMA16-208ENST00000513134 NUP160Q12769 1436 aa19.34■□□□□ 0.69
TMA16-208ENST00000513134 CHD1O14646 1710 aa19.31■□□□□ 0.68
TMA16-208ENST00000513134 CSRNP3Q8WYN3 585 aa19.3■□□□□ 0.68
TMA16-208ENST00000513134 EEA1Q15075 1411 aa19.29■□□□□ 0.68
TMA16-208ENST00000513134 CLASP1Q7Z460 1538 aa19.27■□□□□ 0.68
TMA16-208ENST00000513134 CUL7Q14999 1698 aa19.27■□□□□ 0.67
TMA16-208ENST00000513134 PRXQ9BXM0 1461 aa19.26■□□□□ 0.67
TMA16-208ENST00000513134 RAPGEF2Q9Y4G8 1499 aa19.23■□□□□ 0.67
TMA16-208ENST00000513134 CEP170Q5SW79 1584 aa19.23■□□□□ 0.67
TMA16-208ENST00000513134 KIAA0586Q9BVV6 1533 aa19.18■□□□□ 0.66
TMA16-208ENST00000513134 JPH4Q96JJ6 628 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 592.5 ms