RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 AEBP2Q6ZN18 517 aaPredicted RBP27.43■■□□□ 1.98
ATXN3-235ENST00000556082 CHIC1Q5VXU3 224 aa26.31■■□□□ 1.8
ATXN3-235ENST00000556082 SENP3Q9H4L4 574 aaPredicted RBP23.54■■□□□ 1.36
ATXN3-235ENST00000556082 PHF23Q9BUL5 403 aaPredicted RBP23.19■■□□□ 1.3
ATXN3-235ENST00000556082 FOXD1Q16676 465 aa21.81■■□□□ 1.08
ATXN3-235ENST00000556082 PLPPR3Q6T4P5 718 aa21.16■□□□□ 0.98
ATXN3-235ENST00000556082 MSH5O43196 834 aa20.5■□□□□ 0.87
ATXN3-235ENST00000556082 PPP6R1Q9UPN7 881 aa20.46■□□□□ 0.87
ATXN3-235ENST00000556082 PIAS4Q8N2W9 510 aaPredicted RBP20.43■□□□□ 0.86
ATXN3-235ENST00000556082 ADRA2BP18089 450 aa20.4■□□□□ 0.86
ATXN3-235ENST00000556082 POTEDQ86YR6 584 aa19.61■□□□□ 0.73
ATXN3-235ENST00000556082 SCAF1Q9H7N4 1312 aaKnown RBP18.91■□□□□ 0.62
ATXN3-235ENST00000556082 MAPK8IP2Q13387 824 aaPredicted RBP18.67■□□□□ 0.58
ATXN3-235ENST00000556082 DMRT2Q9Y5R5 561 aa18.66■□□□□ 0.58
ATXN3-235ENST00000556082 PPP4R3CPQ6ZMV5 832 aa18.49■□□□□ 0.55
ATXN3-235ENST00000556082 NISCHQ9Y2I1 1504 aa18.36■□□□□ 0.53
ATXN3-235ENST00000556082 CNKSR2Q8WXI2 1034 aa18.18■□□□□ 0.5
ATXN3-235ENST00000556082 HOXD11P31277 338 aaPredicted RBP18.07■□□□□ 0.48
ATXN3-235ENST00000556082 RNF216Q9NWF9 866 aaPredicted RBP17.98■□□□□ 0.47
ATXN3-235ENST00000556082 NCBP3Q53F19 620 aaKnown RBP17.95■□□□□ 0.46
ATXN3-235ENST00000556082 DCAF8L1A6NGE4 600 aa17.79■□□□□ 0.44
ATXN3-235ENST00000556082 DNAJC5BQ9UF47 199 aa17.58■□□□□ 0.4
ATXN3-235ENST00000556082 NPM3O75607 178 aaKnown RBP17.53■□□□□ 0.4
ATXN3-235ENST00000556082 RNF39Q9H2S5 420 aa17.44■□□□□ 0.38
ATXN3-235ENST00000556082 CACNB1Q02641 598 aaPredicted RBP17.41■□□□□ 0.38
ATXN3-235ENST00000556082 KCNA4P22459 653 aa17.29■□□□□ 0.36
ATXN3-235ENST00000556082 C1QBPQ07021 282 aaKnown RBP17.27■□□□□ 0.36
ATXN3-235ENST00000556082 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.17■□□□□ 0.34
ATXN3-235ENST00000556082 U3KPZ7 1027 aaPredicted RBP16.77■□□□□ 0.28
ATXN3-235ENST00000556082 SLC4A2P04920 1241 aa16.69■□□□□ 0.26
ATXN3-235ENST00000556082 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.55■□□□□ 0.24
ATXN3-235ENST00000556082 APLP2Q06481 763 aa16.55■□□□□ 0.24
ATXN3-235ENST00000556082 HNRNPUL2Q1KMD3 747 aaKnown RBP16.55■□□□□ 0.24
ATXN3-235ENST00000556082 CAPN15O75808 1086 aa16.46■□□□□ 0.23
ATXN3-235ENST00000556082 SPINK5Q9NQ38 1064 aaPredicted RBP16.43■□□□□ 0.22
ATXN3-235ENST00000556082 SLC4A1APQ9BWU0 796 aaKnown RBP16.42■□□□□ 0.22
ATXN3-235ENST00000556082 SAMD1Q6SPF0 538 aaPredicted RBP16.41■□□□□ 0.22
ATXN3-235ENST00000556082 DSG3P32926 999 aa16.35■□□□□ 0.21
ATXN3-235ENST00000556082 ZNF219Q9P2Y4 722 aaPredicted RBP16.32■□□□□ 0.2
ATXN3-235ENST00000556082 MYCNP04198 464 aaPredicted RBP16.29■□□□□ 0.2
ATXN3-235ENST00000556082 TRHP20396 242 aaPredicted RBP16.22■□□□□ 0.19
ATXN3-235ENST00000556082 FOXD4L1Q9NU39 408 aa16.18■□□□□ 0.18
ATXN3-235ENST00000556082 ABCB7O75027 752 aa16.02■□□□□ 0.16
ATXN3-235ENST00000556082 CCDC180Q9P1Z9 1646 aa15.9■□□□□ 0.14
ATXN3-235ENST00000556082 POLA2Q14181 598 aa15.86■□□□□ 0.13
ATXN3-235ENST00000556082 ZBTB22O15209 634 aa15.85■□□□□ 0.13
ATXN3-235ENST00000556082 ATXN8OSP0DMR3 200 aa15.79■□□□□ 0.12
ATXN3-235ENST00000556082 ATF5Q9Y2D1 282 aaPredicted RBP15.75■□□□□ 0.11
ATXN3-235ENST00000556082 RBM42Q9BTD8 480 aaKnown RBP15.72■□□□□ 0.11
ATXN3-235ENST00000556082 ZBTB12Q9Y330 459 aaPredicted RBP15.69■□□□□ 0.1
ATXN3-235ENST00000556082 ZCCHC6Q5VYS8 1495 aaKnown RBP15.44■□□□□ 0.06
ATXN3-235ENST00000556082 POTEHQ6S545 545 aa15.42■□□□□ 0.06
ATXN3-235ENST00000556082 AKT1S1Q96B36 256 aa15.36■□□□□ 0.05
ATXN3-235ENST00000556082 CSRNP3Q8WYN3 585 aa15.32■□□□□ 0.04
ATXN3-235ENST00000556082 FBLN2P98095 1184 aa15.31■□□□□ 0.04
ATXN3-235ENST00000556082 OSCARQ8IYS5 282 aa15.27■□□□□ 0.04
ATXN3-235ENST00000556082 DCAF1Q9Y4B6 1507 aa15.25■□□□□ 0.03
ATXN3-235ENST00000556082 CHRDL2Q6WN34 429 aa15.21■□□□□ 0.03
ATXN3-235ENST00000556082 SPDYE2BA6NHP3 402 aa15.16■□□□□ 0.02
ATXN3-235ENST00000556082 SPDYE6P0CI01 402 aa15.16■□□□□ 0.02
ATXN3-235ENST00000556082 SPDYE2Q495Y8 402 aa15.16■□□□□ 0.02
ATXN3-235ENST00000556082 REM2Q8IYK8 340 aaPredicted RBP15.14■□□□□ 0.01
ATXN3-235ENST00000556082 EHMT2Q96KQ7 1210 aa15.11■□□□□ 0.01
ATXN3-235ENST00000556082 MKRN4PQ13434 485 aaPredicted RBP15.07■□□□□ 0
ATXN3-235ENST00000556082 MYO15BQ96JP2 1530 aa15.04■□□□□ -0
ATXN3-235ENST00000556082 DCAF8L2P0C7V8 631 aa15.03■□□□□ -0
ATXN3-235ENST00000556082 ZNF692Q9BU19 519 aaPredicted RBP14.96□□□□□ -0.01
ATXN3-235ENST00000556082 SHROOM4Q9ULL8 1493 aa14.95□□□□□ -0.02
ATXN3-235ENST00000556082 PITPNM1O00562 1244 aa14.93□□□□□ -0.02
ATXN3-235ENST00000556082 SSUH2Q9Y2M2 353 aa14.93□□□□□ -0.02
ATXN3-235ENST00000556082 PIP4P2Q8N4L2 257 aa14.85□□□□□ -0.03
ATXN3-235ENST00000556082 SPDYE1Q8NFV5 336 aaPredicted RBP14.85□□□□□ -0.03
ATXN3-235ENST00000556082 ABCC9O60706 1549 aa14.84□□□□□ -0.03
ATXN3-235ENST00000556082 FXR2P51116 673 aaKnown RBP eCLIP14.84□□□□□ -0.03
ATXN3-235ENST00000556082 NACADO15069 1562 aa14.82□□□□□ -0.04
ATXN3-235ENST00000556082 CLEC11AQ9Y240 323 aa14.71□□□□□ -0.05
ATXN3-235ENST00000556082 PABPN1Q86U42 306 aaKnown RBP eCLIP14.69□□□□□ -0.06
ATXN3-235ENST00000556082 RB1CC1Q8TDY2 1594 aa14.61□□□□□ -0.07
ATXN3-235ENST00000556082 HAX1O00165 279 aa14.57□□□□□ -0.08
ATXN3-235ENST00000556082 PRR29P0C7W0 189 aa14.57□□□□□ -0.08
ATXN3-235ENST00000556082 PRKAR2AP13861 404 aaKnown RBP14.57□□□□□ -0.08
ATXN3-235ENST00000556082 SP7Q8TDD2 431 aaPredicted RBP14.56□□□□□ -0.08
ATXN3-235ENST00000556082 SCRIBQ14160 1630 aa14.55□□□□□ -0.08
ATXN3-235ENST00000556082 SUPT5HO00267 1087 aaKnown RBP14.52□□□□□ -0.09
ATXN3-235ENST00000556082 SPDYE4A6NLX3 237 aa14.51□□□□□ -0.09
ATXN3-235ENST00000556082 STAG3Q9UJ98 1225 aa14.49□□□□□ -0.09
ATXN3-235ENST00000556082 C19orf67A6NJJ6 358 aa14.36□□□□□ -0.11
ATXN3-235ENST00000556082 CHADLQ6NUI6 762 aa14.36□□□□□ -0.11
ATXN3-235ENST00000556082 RSF1Q96T23 1441 aaPredicted RBP14.32□□□□□ -0.12
ATXN3-235ENST00000556082 EVX2Q03828 476 aa14.29□□□□□ -0.12
ATXN3-235ENST00000556082 FARP1Q9Y4F1 1045 aaPredicted RBP14.27□□□□□ -0.13
ATXN3-235ENST00000556082 PROM2Q8N271 834 aa14.22□□□□□ -0.13
ATXN3-235ENST00000556082 CECR2Q9BXF3 1484 aa14.22□□□□□ -0.13
ATXN3-235ENST00000556082 UNC13AQ9UPW8 1703 aa14.2□□□□□ -0.14
ATXN3-235ENST00000556082 CREBZFQ9NS37 354 aa14.18□□□□□ -0.14
ATXN3-235ENST00000556082 CLCN6P51797 869 aa14.16□□□□□ -0.14
ATXN3-235ENST00000556082 BICRAQ9NZM4 1560 aa14.16□□□□□ -0.14
ATXN3-235ENST00000556082 MROH2BQ7Z745 1585 aa14.15□□□□□ -0.14
ATXN3-235ENST00000556082 BAZ1AQ9NRL2 1556 aaPredicted RBP14.15□□□□□ -0.14
ATXN3-235ENST00000556082 CD44P16070 742 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms