Protein–RNA interactions for Protein: P35269

GTF2F1, General transcription factor IIF subunit 1, humanhuman

Known RBP eCLIP

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1P35269 SMDT1-202ENST00000422252 591 ntTSL 228.53■■■□□ 2.163e-17■■■□□ 15.1
GTF2F1P35269 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.053e-17■■■□□ 15.1
GTF2F1P35269 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.62e-6■■■□□ 15
GTF2F1P35269 TGFBR1-207ENST00000549766 1678 ntTSL 526.57■■□□□ 1.846e-9■■■□□ 15
GTF2F1P35269 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.56e-9■■■□□ 15
GTF2F1P35269 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC22.12■■□□□ 1.136e-9■■■□□ 15
GTF2F1P35269 TGFBR1-209ENST00000552516 5933 ntTSL 1 (best) BASIC12.12□□□□□ -0.476e-9■■■□□ 15
GTF2F1P35269 TGFBR1-204ENST00000547314 533 ntTSL 46.83□□□□□ -1.326e-9■■■□□ 15
GTF2F1P35269 TGFBR1-210ENST00000552573 526 ntTSL 43.2□□□□□ -1.96e-9■■■□□ 15
GTF2F1P35269 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.73e-6■■■□□ 15
GTF2F1P35269 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.02■■□□□ 1.283e-6■■■□□ 15
GTF2F1P35269 BRI3-202ENST00000456357 667 ntTSL 219.68■□□□□ 0.743e-6■■■□□ 15
GTF2F1P35269 BRI3-203ENST00000473967 819 ntTSL 516.46■□□□□ 0.233e-6■■■□□ 15
GTF2F1P35269 BRI3-206ENST00000491463 567 ntTSL 411.92□□□□□ -0.53e-6■■■□□ 15
GTF2F1P35269 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.538e-10■■■□□ 15
GTF2F1P35269 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC22.62■■□□□ 1.218e-10■■■□□ 15
GTF2F1P35269 ASPSCR1-213ENST00000582355 1246 ntTSL 526.04■■□□□ 1.762e-7■■■□□ 15
GTF2F1P35269 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC16.21■□□□□ 0.182e-6■■■□□ 15
GTF2F1P35269 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC15.49■□□□□ 0.072e-6■■■□□ 15
GTF2F1P35269 DPYSL2-205ENST00000521983 591 ntTSL 414.95□□□□□ -0.022e-6■■■□□ 15
GTF2F1P35269 DPYSL2-207ENST00000523093 728 ntTSL 214.9□□□□□ -0.022e-6■■■□□ 15
GTF2F1P35269 DPYSL2-201ENST00000311151 4603 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.62e-6■■■□□ 15
GTF2F1P35269 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.234e-17■■■□□ 15
GTF2F1P35269 PLEKHA7-209ENST00000529213 561 ntTSL 412.68□□□□□ -0.382e-6■■■□□ 15
GTF2F1P35269 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.33■□□□□ 0.681e-6■■■□□ 15
GTF2F1P35269 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.362e-6■■■□□ 15
GTF2F1P35269 CHN2-203ENST00000409350 539 ntTSL 414.3□□□□□ -0.122e-6■■■□□ 15
GTF2F1P35269 CHN2-213ENST00000439384 578 ntTSL 513.42□□□□□ -0.262e-6■■■□□ 15
GTF2F1P35269 CHN2-205ENST00000409964 547 ntTSL 411.9□□□□□ -0.52e-6■■■□□ 15
GTF2F1P35269 CHN2-220ENST00000474070 754 ntTSL 511.06□□□□□ -0.642e-6■■■□□ 15
GTF2F1P35269 CHN2-226ENST00000495789 725 ntTSL 1 (best) BASIC10.68□□□□□ -0.72e-6■■■□□ 15
GTF2F1P35269 KCMF1-204ENST00000456682 661 ntTSL 328.48■■■□□ 2.153e-7■■■□□ 14.9
GTF2F1P35269 SPAG4-206ENST00000468248 1181 ntTSL 524.04■■□□□ 1.443e-7■■■□□ 14.9
GTF2F1P35269 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC23.7■■□□□ 1.383e-7■■■□□ 14.9
GTF2F1P35269 CCDC12-207ENST00000494655 793 ntTSL 222.66■■□□□ 1.223e-7■■■□□ 14.9
GTF2F1P35269 AC145207.2-201ENST00000576021 479 ntTSL 321.86■■□□□ 1.093e-7■■■□□ 14.9
GTF2F1P35269 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.923e-7■■■□□ 14.9
GTF2F1P35269 CCDC12-213ENST00000605875 380 ntTSL 520.65■□□□□ 0.93e-7■■■□□ 14.9
GTF2F1P35269 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.883e-7■■■□□ 14.9
GTF2F1P35269 CCDC12-212ENST00000605358 402 ntTSL 520.21■□□□□ 0.833e-7■■■□□ 14.9
GTF2F1P35269 CCDC12-208ENST00000603885 560 ntTSL 320.17■□□□□ 0.823e-7■■■□□ 14.9
GTF2F1P35269 CCDC12-205ENST00000488069 897 ntTSL 220.17■□□□□ 0.823e-7■■■□□ 14.9
GTF2F1P35269 RALGPS2-209ENST00000495034 1970 ntTSL 220.01■□□□□ 0.793e-7■■■□□ 14.9
GTF2F1P35269 SPAG4-207ENST00000498203 687 ntTSL 519.79■□□□□ 0.763e-7■■■□□ 14.9
GTF2F1P35269 CCDC12-210ENST00000604181 550 ntTSL 419.42■□□□□ 0.73e-7■■■□□ 14.9
GTF2F1P35269 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.593e-7■■■□□ 14.9
GTF2F1P35269 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.433e-7■■■□□ 14.9
GTF2F1P35269 IGF2BP1-205ENST00000510023 754 ntTSL 317.51■□□□□ 0.395e-9■■■□□ 14.9
GTF2F1P35269 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.313e-7■■■□□ 14.9
GTF2F1P35269 SPAG4-205ENST00000463973 981 ntTSL 516.87■□□□□ 0.293e-7■■■□□ 14.9
GTF2F1P35269 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.86■□□□□ 0.293e-7■■■□□ 14.9
GTF2F1P35269 IGF2BP1-206ENST00000515586 768 ntTSL 316.09■□□□□ 0.173e-7■■■□□ 14.9
GTF2F1P35269 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.043e-7■■■□□ 14.9
GTF2F1P35269 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.033e-7■■■□□ 14.9
GTF2F1P35269 DESI1-201ENST00000263256 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.243e-7■■■□□ 14.9
GTF2F1P35269 RALGPS2-203ENST00000367634 7512 ntTSL 2 BASIC13.52□□□□□ -0.243e-7■■■□□ 14.9
GTF2F1P35269 IGF2BP1-202ENST00000431824 1317 ntTSL 1 (best) BASIC13.39□□□□□ -0.273e-7■■■□□ 14.9
GTF2F1P35269 CCDC12-209ENST00000604164 399 ntTSL 312.66□□□□□ -0.383e-7■■■□□ 14.9
GTF2F1P35269 CASC19-272ENST00000641991 1360 nt12.24□□□□□ -0.452e-10■■■□□ 14.9
GTF2F1P35269 SPAG4-203ENST00000454819 827 ntTSL 311.96□□□□□ -0.493e-7■■■□□ 14.9
GTF2F1P35269 SPAG4-204ENST00000462896 368 ntTSL 311.96□□□□□ -0.493e-7■■■□□ 14.9
GTF2F1P35269 SOX5-215ENST00000545921 2589 ntAPPRIS ALT1 TSL 2 BASIC11.93□□□□□ -0.53e-6■■■□□ 14.9
GTF2F1P35269 CCDC12-204ENST00000460035 572 ntTSL 211.68□□□□□ -0.543e-7■■■□□ 14.9
GTF2F1P35269 CCDC12-203ENST00000446836 412 ntTSL 311.62□□□□□ -0.553e-7■■■□□ 14.9
GTF2F1P35269 SOX5-212ENST00000541536 2365 ntTSL 2 BASIC11.27□□□□□ -0.613e-6■■■□□ 14.9
GTF2F1P35269 SOX5-210ENST00000537393 2769 ntTSL 5 BASIC11.05□□□□□ -0.643e-6■■■□□ 14.9
GTF2F1P35269 MSL1-208ENST00000581246 583 ntTSL 410.89□□□□□ -0.673e-7■■■□□ 14.9
GTF2F1P35269 CASC19-247ENST00000641642 1107 nt10.77□□□□□ -0.692e-10■■■□□ 14.9
GTF2F1P35269 CASC19-235ENST00000641496 1154 nt10.75□□□□□ -0.692e-10■■■□□ 14.9
GTF2F1P35269 CASC19-254ENST00000641719 1443 nt10.06□□□□□ -0.82e-10■■■□□ 14.9
GTF2F1P35269 CASC19-263ENST00000641880 1404 nt10.03□□□□□ -0.82e-10■■■□□ 14.9
GTF2F1P35269 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC9.99□□□□□ -0.813e-7■■■□□ 14.9
GTF2F1P35269 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC9.69□□□□□ -0.863e-6■■■□□ 14.9
GTF2F1P35269 CASC19-273ENST00000642010 925 nt9.36□□□□□ -0.912e-10■■■□□ 14.9
GTF2F1P35269 CASC19-283ENST00000642134 870 nt9.08□□□□□ -0.962e-10■■■□□ 14.9
GTF2F1P35269 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.973e-7■■■□□ 14.9
GTF2F1P35269 CASC19-212ENST00000641153 1287 ntBASIC8.81□□□□□ -12e-10■■■□□ 14.9
GTF2F1P35269 CASC19-214ENST00000641171 1493 nt8.76□□□□□ -1.012e-10■■■□□ 14.9
GTF2F1P35269 CASC19-276ENST00000642077 993 nt8.74□□□□□ -1.012e-10■■■□□ 14.9
GTF2F1P35269 CASC19-255ENST00000641733 1385 ntBASIC8.7□□□□□ -1.022e-10■■■□□ 14.9
GTF2F1P35269 CASC19-216ENST00000641179 1140 nt8.5□□□□□ -1.052e-10■■■□□ 14.9
GTF2F1P35269 CASC19-224ENST00000641362 1146 nt8.5□□□□□ -1.052e-10■■■□□ 14.9
GTF2F1P35269 CASC19-239ENST00000641547 915 nt8.5□□□□□ -1.052e-10■■■□□ 14.9
GTF2F1P35269 CASC19-220ENST00000641298 974 nt8.5□□□□□ -1.052e-10■■■□□ 14.9
GTF2F1P35269 CASC19-207ENST00000641029 1047 nt8.45□□□□□ -1.062e-10■■■□□ 14.9
GTF2F1P35269 CASC19-211ENST00000641106 1184 nt8.42□□□□□ -1.062e-10■■■□□ 14.9
GTF2F1P35269 CASC19-252ENST00000641704 1313 nt8.37□□□□□ -1.072e-10■■■□□ 14.9
GTF2F1P35269 CASC19-238ENST00000641523 1558 ntBASIC8.35□□□□□ -1.072e-10■■■□□ 14.9
GTF2F1P35269 CASC19-266ENST00000641934 1050 nt8.22□□□□□ -1.092e-10■■■□□ 14.9
GTF2F1P35269 SOX5-201ENST00000367206 1816 ntTSL 27.97□□□□□ -1.133e-6■■■□□ 14.9
GTF2F1P35269 CASC19-257ENST00000641786 816 nt7.96□□□□□ -1.142e-10■■■□□ 14.9
GTF2F1P35269 CASC19-249ENST00000641681 871 nt7.7□□□□□ -1.182e-10■■■□□ 14.9
GTF2F1P35269 CASC19-274ENST00000642018 970 ntBASIC7.56□□□□□ -1.22e-10■■■□□ 14.9
GTF2F1P35269 CASC19-233ENST00000641487 966 nt7.52□□□□□ -1.212e-10■■■□□ 14.9
GTF2F1P35269 CASC19-225ENST00000641365 2219 nt7.51□□□□□ -1.212e-10■■■□□ 14.9
GTF2F1P35269 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.42□□□□□ -1.223e-6■■■□□ 14.9
GTF2F1P35269 CASC19-260ENST00000641828 2001 ntBASIC7.18□□□□□ -1.262e-10■■■□□ 14.9
GTF2F1P35269 CASC19-284ENST00000642142 1868 ntBASIC7.13□□□□□ -1.272e-10■■■□□ 14.9
GTF2F1P35269 CASC19-228ENST00000641414 1684 ntBASIC7.09□□□□□ -1.272e-10■■■□□ 14.9
GTF2F1P35269 MSL1-209ENST00000582884 580 ntTSL 57.02□□□□□ -1.293e-7■■■□□ 14.9
Retrieved 100 of 18,214 protein–RNA pairs in 105.1 ms