RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 NISCHQ9Y2I1 1504 aa35.59■■■■□ 3.29
TGFBR1-202ENST00000374994 DCAF8L2P0C7V8 631 aa35.49■■■■□ 3.27
TGFBR1-202ENST00000374994 SUPT5HO00267 1087 aaKnown RBP34.69■■■■□ 3.14
TGFBR1-202ENST00000374994 SHROOM4Q9ULL8 1493 aa33.94■■■■□ 3.02
TGFBR1-202ENST00000374994 PELP1Q8IZL8 1130 aaKnown RBP33.46■■■□□ 2.95
TGFBR1-202ENST00000374994 PCGF6Q9BYE7 350 aa33.03■■■□□ 2.88
TGFBR1-202ENST00000374994 ZEB1P37275 1124 aaPredicted RBP32.95■■■□□ 2.87
TGFBR1-202ENST00000374994 EHMT2Q96KQ7 1210 aa32.9■■■□□ 2.86
TGFBR1-202ENST00000374994 APLP2Q06481 763 aa32.83■■■□□ 2.85
TGFBR1-202ENST00000374994 CENPBP07199 599 aaPredicted RBP32.63■■■□□ 2.81
TGFBR1-202ENST00000374994 FAM9AQ8IZU1 332 aaPredicted RBP32.52■■■□□ 2.8
TGFBR1-202ENST00000374994 TRIM41Q8WV44 630 aa32.31■■■□□ 2.76
TGFBR1-202ENST00000374994 MYT1Q01538 1121 aa32.25■■■□□ 2.75
TGFBR1-202ENST00000374994 CCER1Q8TC90 406 aaPredicted RBP32.21■■■□□ 2.75
TGFBR1-202ENST00000374994 HRCP23327 699 aa32.05■■■□□ 2.72
TGFBR1-202ENST00000374994 TTBK1Q5TCY1 1321 aaPredicted RBP31.98■■■□□ 2.71
TGFBR1-202ENST00000374994 TRIM26Q12899 539 aaPredicted RBP31.95■■■□□ 2.7
TGFBR1-202ENST00000374994 ERICH6Q7L0X2 663 aa31.75■■■□□ 2.67
TGFBR1-202ENST00000374994 UBTFP17480 764 aaKnown RBP31.65■■■□□ 2.66
TGFBR1-202ENST00000374994 CHIC1Q5VXU3 224 aa31.57■■■□□ 2.64
TGFBR1-202ENST00000374994 NEFLP07196 543 aa31.52■■■□□ 2.64
TGFBR1-202ENST00000374994 RANGAP1P46060 587 aaPredicted RBP31.4■■■□□ 2.62
TGFBR1-202ENST00000374994 YTHDC1Q96MU7 727 aaKnown RBP31.39■■■□□ 2.62
TGFBR1-202ENST00000374994 LOC105371045A0A1W2PR82 267 aa31.17■■■□□ 2.58
TGFBR1-202ENST00000374994 PPARGC1BQ86YN6 1023 aaKnown RBP31.12■■■□□ 2.57
TGFBR1-202ENST00000374994 ATP1B4Q9UN42 357 aaPredicted RBP31.09■■■□□ 2.57
TGFBR1-202ENST00000374994 DIEXFQ68CQ4 756 aaKnown RBP30.75■■■□□ 2.51
TGFBR1-202ENST00000374994 HNRNPUL2Q1KMD3 747 aaKnown RBP30.65■■■□□ 2.5
TGFBR1-202ENST00000374994 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.59■■■□□ 2.49
TGFBR1-202ENST00000374994 ITGAEP38570 1179 aa30.45■■■□□ 2.47
TGFBR1-202ENST00000374994 DAXXQ9UER7 740 aaPredicted RBP30.33■■■□□ 2.45
TGFBR1-202ENST00000374994 GTF3C3Q9Y5Q9 886 aa30.26■■■□□ 2.43
TGFBR1-202ENST00000374994 ZNF316A6NFI3 1004 aaPredicted RBP30.13■■■□□ 2.41
TGFBR1-202ENST00000374994 ACIN1Q9UKV3 1341 aaKnown RBP30.11■■■□□ 2.41
TGFBR1-202ENST00000374994 DCAF1Q9Y4B6 1507 aa30.06■■■□□ 2.4
TGFBR1-202ENST00000374994 POLR3GLQ9BT43 218 aa30.03■■■□□ 2.4
TGFBR1-202ENST00000374994 RTL5Q5HYW3 569 aaPredicted RBP30.02■■■□□ 2.4
TGFBR1-202ENST00000374994 CLSPNQ9HAW4 1339 aa29.88■■■□□ 2.37
TGFBR1-202ENST00000374994 FAM50AQ14320 339 aaKnown RBP29.84■■■□□ 2.37
TGFBR1-202ENST00000374994 ANP32CO43423 234 aa29.83■■■□□ 2.37
TGFBR1-202ENST00000374994 CDK11AQ9UQ88 783 aaPredicted RBP29.73■■■□□ 2.35
TGFBR1-202ENST00000374994 CSRNP3Q8WYN3 585 aa29.72■■■□□ 2.35
TGFBR1-202ENST00000374994 NEUROD1Q13562 356 aa29.68■■■□□ 2.34
TGFBR1-202ENST00000374994 ZCCHC6Q5VYS8 1495 aaKnown RBP29.66■■■□□ 2.34
TGFBR1-202ENST00000374994 BCANQ96GW7 911 aa29.65■■■□□ 2.34
TGFBR1-202ENST00000374994 CNGB1Q14028 1251 aaPredicted RBP29.61■■■□□ 2.33
TGFBR1-202ENST00000374994 TRIM52Q96A61 297 aa29.6■■■□□ 2.33
TGFBR1-202ENST00000374994 MYT1LQ9UL68 1186 aa29.51■■■□□ 2.31
TGFBR1-202ENST00000374994 ABCC9O60706 1549 aa29.5■■■□□ 2.31
TGFBR1-202ENST00000374994 PABPN1Q86U42 306 aaKnown RBP eCLIP29.34■■■□□ 2.29
TGFBR1-202ENST00000374994 ANP32AP39687 249 aaKnown RBP29.21■■■□□ 2.27
TGFBR1-202ENST00000374994 SCAF1Q9H7N4 1312 aaKnown RBP29.19■■■□□ 2.26
TGFBR1-202ENST00000374994 SLC4A1APQ9BWU0 796 aaKnown RBP29.16■■■□□ 2.26
TGFBR1-202ENST00000374994 FKBP8Q14318 412 aa29.13■■■□□ 2.25
TGFBR1-202ENST00000374994 ZNF326Q5BKZ1 582 aaKnown RBP29.12■■■□□ 2.25
TGFBR1-202ENST00000374994 TONSLQ96HA7 1378 aa29.06■■■□□ 2.24
TGFBR1-202ENST00000374994 MYO15BQ96JP2 1530 aa29.01■■■□□ 2.24
TGFBR1-202ENST00000374994 CCDC180Q9P1Z9 1646 aa28.99■■■□□ 2.23
TGFBR1-202ENST00000374994 SCRIBQ14160 1630 aa28.96■■■□□ 2.23
TGFBR1-202ENST00000374994 EEA1Q15075 1411 aa28.91■■■□□ 2.22
TGFBR1-202ENST00000374994 HNRNPUQ00839 825 aaKnown RBP eCLIP28.91■■■□□ 2.22
TGFBR1-202ENST00000374994 DDX10Q13206 875 aaKnown RBP28.91■■■□□ 2.22
TGFBR1-202ENST00000374994 P3H3Q8IVL6 736 aa28.89■■■□□ 2.22
TGFBR1-202ENST00000374994 MIER1Q8N108 512 aa28.89■■■□□ 2.22
TGFBR1-202ENST00000374994 CANXP27824 592 aaKnown RBP28.86■■■□□ 2.21
TGFBR1-202ENST00000374994 ZBTB47Q9UFB7 747 aaPredicted RBP28.86■■■□□ 2.21
TGFBR1-202ENST00000374994 CLIP1P30622 1438 aa28.79■■■□□ 2.2
TGFBR1-202ENST00000374994 RSF1Q96T23 1441 aaPredicted RBP28.71■■■□□ 2.19
TGFBR1-202ENST00000374994 NPM2Q86SE8 214 aaKnown RBP28.69■■■□□ 2.18
TGFBR1-202ENST00000374994 CEP162Q5TB80 1403 aa28.69■■■□□ 2.18
TGFBR1-202ENST00000374994 GOLGA3Q08378 1498 aa28.67■■■□□ 2.18
TGFBR1-202ENST00000374994 FAM9BQ8IZU0 186 aa28.65■■■□□ 2.18
TGFBR1-202ENST00000374994 NEFMP07197 916 aa28.64■■■□□ 2.18
TGFBR1-202ENST00000374994 CCDC136Q96JN2 1154 aa28.62■■■□□ 2.17
TGFBR1-202ENST00000374994 TNIKQ9UKE5 1360 aa28.6■■■□□ 2.17
TGFBR1-202ENST00000374994 ZNF777Q9ULD5 760 aaPredicted RBP28.54■■■□□ 2.16
TGFBR1-202ENST00000374994 MRS2Q9HD23 443 aa28.53■■■□□ 2.16
TGFBR1-202ENST00000374994 UPF2Q9HAU5 1272 aaKnown RBP28.53■■■□□ 2.16
TGFBR1-202ENST00000374994 FBLN2P98095 1184 aa28.51■■■□□ 2.15
TGFBR1-202ENST00000374994 TMC1Q8TDI8 760 aa28.51■■■□□ 2.15
TGFBR1-202ENST00000374994 ARID3CA6NKF2 412 aa28.48■■■□□ 2.15
TGFBR1-202ENST00000374994 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.48■■■□□ 2.15
TGFBR1-202ENST00000374994 ANP32BQ92688 251 aaKnown RBP28.44■■■□□ 2.14
TGFBR1-202ENST00000374994 ANP32EQ9BTT0 268 aa28.43■■■□□ 2.14
TGFBR1-202ENST00000374994 EIF4G2P78344 907 aaKnown RBP eCLIP28.43■■■□□ 2.149e-6■□□□□ 10.1
TGFBR1-202ENST00000374994 MTUS2Q5JR59 1369 aa28.43■■■□□ 2.14
TGFBR1-202ENST00000374994 CEP164Q9UPV0 1460 aa28.38■■■□□ 2.13
TGFBR1-202ENST00000374994 EIF5BO60841 1220 aaKnown RBP28.35■■■□□ 2.13
TGFBR1-202ENST00000374994 WRNQ14191 1432 aaPredicted RBP eCLIP28.34■■■□□ 2.13
TGFBR1-202ENST00000374994 CHIC2Q9UKJ5 165 aa28.32■■■□□ 2.12
TGFBR1-202ENST00000374994 NBR1Q14596 966 aa28.31■■■□□ 2.12
TGFBR1-202ENST00000374994 GLIPR1L2Q4G1C9 344 aa28.3■■■□□ 2.12
TGFBR1-202ENST00000374994 RB1CC1Q8TDY2 1594 aa28.3■■■□□ 2.12
TGFBR1-202ENST00000374994 HSP90AA1P07900 732 aaKnown RBP28.27■■■□□ 2.12
TGFBR1-202ENST00000374994 DDRGK1Q96HY6 314 aa28.23■■■□□ 2.11
TGFBR1-202ENST00000374994 WDR43Q15061 677 aaKnown RBP eCLIP28.23■■■□□ 2.11
TGFBR1-202ENST00000374994 IRX6P78412 446 aaPredicted RBP28.2■■■□□ 2.11
TGFBR1-202ENST00000374994 TSPY4P0CV99 314 aa28.18■■■□□ 2.1
TGFBR1-202ENST00000374994 TSPY10P0CW01 314 aa28.18■■■□□ 2.1
TGFBR1-202ENST00000374994 TIMELESSQ9UNS1 1208 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms