RNA–Protein interactions for RNA: ENST00000448276.6

SMARCD2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-203ENST00000448276 NISCHQ9Y2I1 1504 aa40.1■■■■■ 4.01
SMARCD2-203ENST00000448276 SHROOM4Q9ULL8 1493 aa35.27■■■■□ 3.24
SMARCD2-203ENST00000448276 SUPT5HO00267 1087 aaKnown RBP34.94■■■■□ 3.18
SMARCD2-203ENST00000448276 HRCP23327 699 aa34.43■■■■□ 3.1
SMARCD2-203ENST00000448276 MYO15BQ96JP2 1530 aa34.27■■■■□ 3.08
SMARCD2-203ENST00000448276 CCDC180Q9P1Z9 1646 aa34.12■■■■□ 3.05
SMARCD2-203ENST00000448276 CHIC1Q5VXU3 224 aa34.11■■■■□ 3.05
SMARCD2-203ENST00000448276 PCGF6Q9BYE7 350 aa34.1■■■■□ 3.05
SMARCD2-203ENST00000448276 PPARGC1BQ86YN6 1023 aaKnown RBP33.99■■■■□ 3.03
SMARCD2-203ENST00000448276 ZCCHC6Q5VYS8 1495 aaKnown RBP33.83■■■■□ 3.01
SMARCD2-203ENST00000448276 DCAF8L2P0C7V8 631 aa33.69■■■□□ 2.98
SMARCD2-203ENST00000448276 LOC105371045A0A1W2PR82 267 aa33.42■■■□□ 2.94
SMARCD2-203ENST00000448276 DCAF1Q9Y4B6 1507 aa33.19■■■□□ 2.9
SMARCD2-203ENST00000448276 TRIM26Q12899 539 aaPredicted RBP32.96■■■□□ 2.87
SMARCD2-203ENST00000448276 SCAF1Q9H7N4 1312 aaKnown RBP32.42■■■□□ 2.78
SMARCD2-203ENST00000448276 ZEB1P37275 1124 aaPredicted RBP32.41■■■□□ 2.78
SMARCD2-203ENST00000448276 FAM9AQ8IZU1 332 aaPredicted RBP32.36■■■□□ 2.77
SMARCD2-203ENST00000448276 EHMT2Q96KQ7 1210 aa32.35■■■□□ 2.77
SMARCD2-203ENST00000448276 PELP1Q8IZL8 1130 aaKnown RBP32.27■■■□□ 2.76
SMARCD2-203ENST00000448276 TRIM41Q8WV44 630 aa32.25■■■□□ 2.75
SMARCD2-203ENST00000448276 ABCC9O60706 1549 aa32.14■■■□□ 2.74
SMARCD2-203ENST00000448276 SCRIBQ14160 1630 aa32.09■■■□□ 2.73
SMARCD2-203ENST00000448276 RSF1Q96T23 1441 aaPredicted RBP32.01■■■□□ 2.71
SMARCD2-203ENST00000448276 RB1CC1Q8TDY2 1594 aa31.85■■■□□ 2.69
SMARCD2-203ENST00000448276 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.79■■■□□ 2.68
SMARCD2-203ENST00000448276 NEUROD1Q13562 356 aa31.71■■■□□ 2.67
SMARCD2-203ENST00000448276 NACADO15069 1562 aa31.71■■■□□ 2.67
SMARCD2-203ENST00000448276 ACIN1Q9UKV3 1341 aaKnown RBP31.68■■■□□ 2.66
SMARCD2-203ENST00000448276 CCER1Q8TC90 406 aaPredicted RBP31.63■■■□□ 2.65
SMARCD2-203ENST00000448276 GTF3C3Q9Y5Q9 886 aa31.48■■■□□ 2.63
SMARCD2-203ENST00000448276 TTBK1Q5TCY1 1321 aaPredicted RBP31.45■■■□□ 2.63
SMARCD2-203ENST00000448276 DIEXFQ68CQ4 756 aaKnown RBP31.43■■■□□ 2.62
SMARCD2-203ENST00000448276 CECR2Q9BXF3 1484 aa31.37■■■□□ 2.61
SMARCD2-203ENST00000448276 CENPBP07199 599 aaPredicted RBP31.26■■■□□ 2.59
SMARCD2-203ENST00000448276 MROH2BQ7Z745 1585 aa31.21■■■□□ 2.59
SMARCD2-203ENST00000448276 WIZO95785 1651 aa31.1■■■□□ 2.57
SMARCD2-203ENST00000448276 YTHDC1Q96MU7 727 aaKnown RBP31.03■■■□□ 2.56
SMARCD2-203ENST00000448276 ZNF316A6NFI3 1004 aaPredicted RBP30.89■■■□□ 2.53
SMARCD2-203ENST00000448276 CEP162Q5TB80 1403 aa30.85■■■□□ 2.53
SMARCD2-203ENST00000448276 ABCC8Q09428 1581 aa30.83■■■□□ 2.53
SMARCD2-203ENST00000448276 CCDC88BA6NC98 1476 aa30.82■■■□□ 2.52
SMARCD2-203ENST00000448276 BAZ1AQ9NRL2 1556 aaPredicted RBP30.81■■■□□ 2.52
SMARCD2-203ENST00000448276 WRNQ14191 1432 aaPredicted RBP eCLIP30.8■■■□□ 2.523e-6■■■■□ 26.3
SMARCD2-203ENST00000448276 EIF4G1Q04637 1599 aaKnown RBP30.79■■■□□ 2.52
SMARCD2-203ENST00000448276 PABPN1Q86U42 306 aaKnown RBP eCLIP30.78■■■□□ 2.521e-8■■■■■ 27
SMARCD2-203ENST00000448276 MYT1Q01538 1121 aa30.75■■■□□ 2.51
SMARCD2-203ENST00000448276 UNC13AQ9UPW8 1703 aa30.74■■■□□ 2.51
SMARCD2-203ENST00000448276 MIER1Q8N108 512 aa30.74■■■□□ 2.51
SMARCD2-203ENST00000448276 SOGA1O94964 1423 aa30.72■■■□□ 2.51
SMARCD2-203ENST00000448276 UBTFP17480 764 aaKnown RBP30.68■■■□□ 2.5
SMARCD2-203ENST00000448276 HNRNPUL2Q1KMD3 747 aaKnown RBP30.61■■■□□ 2.49
SMARCD2-203ENST00000448276 TNIKQ9UKE5 1360 aa30.6■■■□□ 2.49
SMARCD2-203ENST00000448276 RUSC2Q8N2Y8 1516 aa30.58■■■□□ 2.49
SMARCD2-203ENST00000448276 SMARCA4P51532 1647 aa30.58■■■□□ 2.49
SMARCD2-203ENST00000448276 CSRNP3Q8WYN3 585 aa30.53■■■□□ 2.48
SMARCD2-203ENST00000448276 TOP2AP11388 1531 aaKnown RBP30.45■■■□□ 2.47
SMARCD2-203ENST00000448276 BICRAQ9NZM4 1560 aa30.43■■■□□ 2.46
SMARCD2-203ENST00000448276 SMARCA2P51531 1590 aa30.34■■■□□ 2.45
SMARCD2-203ENST00000448276 GOLGA3Q08378 1498 aa30.27■■■□□ 2.44
SMARCD2-203ENST00000448276 RANGAP1P46060 587 aaPredicted RBP30.23■■■□□ 2.43
SMARCD2-203ENST00000448276 EEA1Q15075 1411 aa30.23■■■□□ 2.43
SMARCD2-203ENST00000448276 CLIP1P30622 1438 aa30.08■■■□□ 2.41
SMARCD2-203ENST00000448276 APLP2Q06481 763 aa30.04■■■□□ 2.4
SMARCD2-203ENST00000448276 SUPT16HQ9Y5B9 1047 aaKnown RBP30.03■■■□□ 2.4
SMARCD2-203ENST00000448276 CEP164Q9UPV0 1460 aa29.98■■■□□ 2.39
SMARCD2-203ENST00000448276 VPS8Q8N3P4 1428 aa29.97■■■□□ 2.39
SMARCD2-203ENST00000448276 PEG3Q9GZU2 1588 aa29.95■■■□□ 2.38
SMARCD2-203ENST00000448276 ATAD2BQ9ULI0 1458 aa29.94■■■□□ 2.38
SMARCD2-203ENST00000448276 SYNJ1O43426 1573 aa29.87■■■□□ 2.37
SMARCD2-203ENST00000448276 BAZ1BQ9UIG0 1483 aaKnown RBP29.86■■■□□ 2.37
SMARCD2-203ENST00000448276 RAPGEF2Q9Y4G8 1499 aa29.86■■■□□ 2.37
SMARCD2-203ENST00000448276 KIF21BO75037 1637 aa29.84■■■□□ 2.37
SMARCD2-203ENST00000448276 DHX57Q6P158 1386 aaKnown RBP29.84■■■□□ 2.37
SMARCD2-203ENST00000448276 TSHZ2Q9NRE2 1034 aa29.79■■■□□ 2.36
SMARCD2-203ENST00000448276 KCNH8Q96L42 1107 aa29.72■■■□□ 2.35
SMARCD2-203ENST00000448276 KANK4Q5T7N3 995 aaPredicted RBP29.7■■■□□ 2.34
SMARCD2-203ENST00000448276 CLSPNQ9HAW4 1339 aa29.67■■■□□ 2.34
SMARCD2-203ENST00000448276 BCANQ96GW7 911 aa29.62■■■□□ 2.33
SMARCD2-203ENST00000448276 ITGAEP38570 1179 aa29.58■■■□□ 2.33
SMARCD2-203ENST00000448276 ANP32EQ9BTT0 268 aa29.55■■■□□ 2.32
SMARCD2-203ENST00000448276 ARAP1Q96P48 1450 aa29.47■■■□□ 2.31
SMARCD2-203ENST00000448276 NCAPD3P42695 1498 aa29.39■■■□□ 2.3
SMARCD2-203ENST00000448276 FKBP8Q14318 412 aa29.39■■■□□ 2.3
SMARCD2-203ENST00000448276 RRBP1Q9P2E9 1410 aaKnown RBP29.34■■■□□ 2.29
SMARCD2-203ENST00000448276 DDX10Q13206 875 aaKnown RBP29.32■■■□□ 2.28
SMARCD2-203ENST00000448276 CCNB3Q8WWL7 1395 aa29.3■■■□□ 2.28
SMARCD2-203ENST00000448276 HMGXB3Q12766 1538 aa29.29■■■□□ 2.28
SMARCD2-203ENST00000448276 PRXQ9BXM0 1461 aa29.27■■■□□ 2.28
SMARCD2-203ENST00000448276 TOP2BQ02880 1626 aa29.26■■■□□ 2.27
SMARCD2-203ENST00000448276 RAB3GAP2Q9H2M9 1393 aa29.23■■■□□ 2.27
SMARCD2-203ENST00000448276 HIRIP3Q9BW71 556 aaPredicted RBP29.22■■■□□ 2.27
SMARCD2-203ENST00000448276 SIN3AQ96ST3 1273 aa29.21■■■□□ 2.27
SMARCD2-203ENST00000448276 BCL11AQ9H165 835 aa29.21■■■□□ 2.27
SMARCD2-203ENST00000448276 CUX2O14529 1486 aa29.21■■■□□ 2.27
SMARCD2-203ENST00000448276 ERICH3Q5RHP9 1530 aa29.18■■■□□ 2.26
SMARCD2-203ENST00000448276 MAPKBP1O60336 1514 aa29.17■■■□□ 2.26
SMARCD2-203ENST00000448276 TRIM52Q96A61 297 aa29.15■■■□□ 2.26
SMARCD2-203ENST00000448276 RBM19Q9Y4C8 960 aaKnown RBP29.12■■■□□ 2.25
SMARCD2-203ENST00000448276 WDR97A6NE52 1622 aa29.1■■■□□ 2.25
SMARCD2-203ENST00000448276 ARHGAP35Q9NRY4 1499 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms