RNA–Protein interactions for RNA: ENST00000456682.1

KCMF1-204, Transcript of potassium channel modulatory factor 1, humanhuman

TSL 3

Gene KCMF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1-204ENST00000456682 NISCHQ9Y2I1 1504 aa63.48■■■■■ 7.75
KCMF1-204ENST00000456682 CCDC180Q9P1Z9 1646 aa56.37■■■■■ 6.61
KCMF1-204ENST00000456682 ABCC9O60706 1549 aa55.02■■■■■ 6.4
KCMF1-204ENST00000456682 NACADO15069 1562 aa53■■■■■ 6.07
KCMF1-204ENST00000456682 RB1CC1Q8TDY2 1594 aa53■■■■■ 6.07
KCMF1-204ENST00000456682 DCAF8L2P0C7V8 631 aa52.97■■■■■ 6.07
KCMF1-204ENST00000456682 ZCCHC6Q5VYS8 1495 aaKnown RBP52.89■■■■■ 6.06
KCMF1-204ENST00000456682 MYO15BQ96JP2 1530 aa52.76■■■■■ 6.04
KCMF1-204ENST00000456682 DCAF1Q9Y4B6 1507 aa52.56■■■■■ 6.01
KCMF1-204ENST00000456682 UNC13AQ9UPW8 1703 aa51.76■■■■■ 5.88
KCMF1-204ENST00000456682 PABPN1Q86U42 306 aaKnown RBP eCLIP51.46■■■■■ 5.83
KCMF1-204ENST00000456682 BICRAQ9NZM4 1560 aa51.4■■■■■ 5.82
KCMF1-204ENST00000456682 SCRIBQ14160 1630 aa51.38■■■■■ 5.82
KCMF1-204ENST00000456682 SHROOM4Q9ULL8 1493 aa50.9■■■■■ 5.74
KCMF1-204ENST00000456682 DNAJC5BQ9UF47 199 aa50.47■■■■■ 5.67
KCMF1-204ENST00000456682 EIF4G1Q04637 1599 aaKnown RBP50.02■■■■■ 5.6
KCMF1-204ENST00000456682 CC2D2AQ9P2K1 1620 aa49.78■■■■■ 5.56
KCMF1-204ENST00000456682 CECR2Q9BXF3 1484 aa49.44■■■■■ 5.51
KCMF1-204ENST00000456682 SMARCA4P51532 1647 aa49.21■■■■■ 5.47
KCMF1-204ENST00000456682 BAZ1AQ9NRL2 1556 aaPredicted RBP49.19■■■■■ 5.46
KCMF1-204ENST00000456682 ATAD2BQ9ULI0 1458 aa48.94■■■■■ 5.43
KCMF1-204ENST00000456682 NCAPD3P42695 1498 aa48.93■■■■■ 5.42
KCMF1-204ENST00000456682 MROH2BQ7Z745 1585 aa48.91■■■■■ 5.42
KCMF1-204ENST00000456682 SMARCA2P51531 1590 aa48.89■■■■■ 5.42
KCMF1-204ENST00000456682 PEG3Q9GZU2 1588 aa48.77■■■■■ 5.4
KCMF1-204ENST00000456682 HMGXB3Q12766 1538 aa48.66■■■■■ 5.38
KCMF1-204ENST00000456682 BAZ1BQ9UIG0 1483 aaKnown RBP48.52■■■■■ 5.36
KCMF1-204ENST00000456682 RSF1Q96T23 1441 aaPredicted RBP48.42■■■■■ 5.34
KCMF1-204ENST00000456682 WIZO95785 1651 aa48.37■■■■■ 5.33
KCMF1-204ENST00000456682 TOP2AP11388 1531 aaKnown RBP47.87■■■■■ 5.25
KCMF1-204ENST00000456682 NESP48681 1621 aa47.66■■■■■ 5.22
KCMF1-204ENST00000456682 LAMC3Q9Y6N6 1575 aa47.58■■■■■ 5.21
KCMF1-204ENST00000456682 CADPSQ9ULU8 1353 aa47.5■■■■■ 5.2
KCMF1-204ENST00000456682 ERCC6Q03468 1493 aa47.41■■■■■ 5.18
KCMF1-204ENST00000456682 CCDC88BA6NC98 1476 aa47.34■■■■■ 5.17
KCMF1-204ENST00000456682 PDS5BQ9NTI5 1447 aa47.28■■■■■ 5.16
KCMF1-204ENST00000456682 SUPT5HO00267 1087 aaKnown RBP47.25■■■■■ 5.15
KCMF1-204ENST00000456682 CFTRP13569 1480 aa47.24■■■■■ 5.15
KCMF1-204ENST00000456682 KIF21AQ7Z4S6 1674 aa47.06■■■■■ 5.12
KCMF1-204ENST00000456682 CUX2O14529 1486 aa46.91■■■■■ 5.1
KCMF1-204ENST00000456682 FANCD2Q9BXW9 1451 aa46.91■■■■■ 5.1
KCMF1-204ENST00000456682 THOC2Q8NI27 1593 aaKnown RBP46.9■■■■■ 5.1
KCMF1-204ENST00000456682 CEP164Q9UPV0 1460 aa46.83■■■■■ 5.09
KCMF1-204ENST00000456682 PRDM2Q13029 1718 aa46.82■■■■■ 5.09
KCMF1-204ENST00000456682 MRC2Q9UBG0 1479 aa46.76■■■■■ 5.08
KCMF1-204ENST00000456682 WDR62O43379 1518 aa46.59■■■■■ 5.05
KCMF1-204ENST00000456682 URB2Q14146 1524 aaKnown RBP46.44■■■■■ 5.03
KCMF1-204ENST00000456682 ABCC8Q09428 1581 aa46.23■■■■■ 4.99
KCMF1-204ENST00000456682 TOPBP1Q92547 1522 aa46.18■■■■■ 4.98
KCMF1-204ENST00000456682 DNMBPQ6XZF7 1577 aa46.13■■■■■ 4.97
KCMF1-204ENST00000456682 IFT140Q96RY7 1462 aa45.88■■■■■ 4.94
KCMF1-204ENST00000456682 CUX1P39880 1505 aa45.87■■■■■ 4.93
KCMF1-204ENST00000456682 POLA1P09884 1462 aaPredicted RBP45.8■■■■■ 4.92
KCMF1-204ENST00000456682 FGD5Q6ZNL6 1462 aa45.69■■■■■ 4.91
KCMF1-204ENST00000456682 TARBP1Q13395 1621 aaKnown RBP45.67■■■■■ 4.9
KCMF1-204ENST00000456682 SOGA1O94964 1423 aa45.64■■■■■ 4.9
KCMF1-204ENST00000456682 WRNQ14191 1432 aaPredicted RBP eCLIP45.64■■■■■ 4.9
KCMF1-204ENST00000456682 ZNF608Q9ULD9 1512 aaPredicted RBP45.63■■■■■ 4.9
KCMF1-204ENST00000456682 RAD54L2Q9Y4B4 1467 aa45.6■■■■■ 4.89
KCMF1-204ENST00000456682 TOP2BQ02880 1626 aa45.52■■■■■ 4.88
KCMF1-204ENST00000456682 BIVM-ERCC5R4GMW8 1640 aa45.5■■■■■ 4.87
KCMF1-204ENST00000456682 SYNJ1O43426 1573 aa45.48■■■■■ 4.87
KCMF1-204ENST00000456682 EIF4G3O43432 1585 aaKnown RBP45.43■■■■■ 4.86
KCMF1-204ENST00000456682 AQRO60306 1485 aaKnown RBP eCLIP45.41■■■■■ 4.863e-7■■□□□ 11.6
KCMF1-204ENST00000456682 DNAJC5Q9H3Z4 198 aa45.4■■■■■ 4.86
KCMF1-204ENST00000456682 TDRD9Q8NDG6 1382 aaKnown RBP45.35■■■■■ 4.85
KCMF1-204ENST00000456682 WDR97A6NE52 1622 aa45.33■■■■■ 4.85
KCMF1-204ENST00000456682 ABCA10Q8WWZ4 1543 aa45.29■■■■■ 4.84
KCMF1-204ENST00000456682 GAPVD1Q14C86 1478 aa45.1■■■■■ 4.81
KCMF1-204ENST00000456682 GRIN2BQ13224 1484 aa45.08■■■■■ 4.81
KCMF1-204ENST00000456682 ABCA5Q8WWZ7 1642 aa45.06■■■■■ 4.8
KCMF1-204ENST00000456682 OSCARQ8IYS5 282 aa45.04■■■■■ 4.8
KCMF1-204ENST00000456682 SNAPC4Q5SXM2 1469 aa44.97■■■■■ 4.79
KCMF1-204ENST00000456682 MAGI1Q96QZ7 1491 aaPredicted RBP44.95■■■■■ 4.79
KCMF1-204ENST00000456682 PBRM1Q86U86 1689 aa44.93■■■■■ 4.78
KCMF1-204ENST00000456682 FBLN2P98095 1184 aa44.83■■■■■ 4.77
KCMF1-204ENST00000456682 CHD1O14646 1710 aa44.83■■■■■ 4.77
KCMF1-204ENST00000456682 CHMP7Q8WUX9 453 aaPredicted RBP44.77■■■■■ 4.76
KCMF1-204ENST00000456682 SYNJ2O15056 1496 aa44.77■■■■■ 4.76
KCMF1-204ENST00000456682 ERICH3Q5RHP9 1530 aa44.75■■■■■ 4.75
KCMF1-204ENST00000456682 KIF27Q86VH2 1401 aa44.68■■■■■ 4.74
KCMF1-204ENST00000456682 TRIM41Q8WV44 630 aa44.65■■■■■ 4.74
KCMF1-204ENST00000456682 ADAMTS12P58397 1594 aa44.6■■■■■ 4.73
KCMF1-204ENST00000456682 FHAD1B1AJZ9 1412 aa44.6■■■■■ 4.73
KCMF1-204ENST00000456682 IGF1RP08069 1367 aa44.52■■■■■ 4.72
KCMF1-204ENST00000456682 GRIN2AQ12879 1464 aa44.48■■■■■ 4.71
KCMF1-204ENST00000456682 CLASP1Q7Z460 1538 aa44.4■■■■■ 4.7
KCMF1-204ENST00000456682 CUL7Q14999 1698 aa44.33■■■■■ 4.69
KCMF1-204ENST00000456682 NUP160Q12769 1436 aa44.31■■■■■ 4.68
KCMF1-204ENST00000456682 RUSC2Q8N2Y8 1516 aa44.29■■■■■ 4.68
KCMF1-204ENST00000456682 CARMIL1Q5VZK9 1371 aa44.25■■■■■ 4.67
KCMF1-204ENST00000456682 CEP170Q5SW79 1584 aa44.24■■■■■ 4.67
KCMF1-204ENST00000456682 ARHGEF11O15085 1522 aa44.24■■■■■ 4.67
KCMF1-204ENST00000456682 RIMBP3CA6NJZ7 1639 aa44.22■■■■■ 4.67
KCMF1-204ENST00000456682 RIMBP3BA6NNM3 1639 aa44.22■■■■■ 4.67
KCMF1-204ENST00000456682 RIMBP3Q9UFD9 1639 aa44.22■■■■■ 4.67
KCMF1-204ENST00000456682 CHIC1Q5VXU3 224 aa44.21■■■■■ 4.67
KCMF1-204ENST00000456682 RAPGEF2Q9Y4G8 1499 aa43.97■■■■■ 4.63
KCMF1-204ENST00000456682 SHROOM2Q13796 1616 aa43.94■■■■■ 4.62
KCMF1-204ENST00000456682 KIAA0586Q9BVV6 1533 aa43.93■■■■■ 4.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms