RNA–Protein interactions for RNA: ENST00000292314.6

CCDC12-201, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5 BASIC

Gene CCDC12, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-201ENST00000292314 NISCHQ9Y2I1 1504 aa37.76■■■■□ 3.63
CCDC12-201ENST00000292314 CCDC180Q9P1Z9 1646 aa33.33■■■□□ 2.93
CCDC12-201ENST00000292314 ABCC9O60706 1549 aa31.84■■■□□ 2.69
CCDC12-201ENST00000292314 ZCCHC6Q5VYS8 1495 aaKnown RBP31.61■■■□□ 2.65
CCDC12-201ENST00000292314 DCAF8L2P0C7V8 631 aa31.31■■■□□ 2.6
CCDC12-201ENST00000292314 DCAF1Q9Y4B6 1507 aa31.3■■■□□ 2.6
CCDC12-201ENST00000292314 AEBP2Q6ZN18 517 aaPredicted RBP31.27■■■□□ 2.6
CCDC12-201ENST00000292314 MYO15BQ96JP2 1530 aa31.17■■■□□ 2.58
CCDC12-201ENST00000292314 NACADO15069 1562 aa31.14■■■□□ 2.58
CCDC12-201ENST00000292314 RB1CC1Q8TDY2 1594 aa31.03■■■□□ 2.56
CCDC12-201ENST00000292314 CHIC1Q5VXU3 224 aa31■■■□□ 2.55
CCDC12-201ENST00000292314 SCRIBQ14160 1630 aa30.44■■■□□ 2.46
CCDC12-201ENST00000292314 SHROOM4Q9ULL8 1493 aa30.27■■■□□ 2.44
CCDC12-201ENST00000292314 UNC13AQ9UPW8 1703 aa30.25■■■□□ 2.43
CCDC12-201ENST00000292314 BICRAQ9NZM4 1560 aa29.92■■■□□ 2.38
CCDC12-201ENST00000292314 PABPN1Q86U42 306 aaKnown RBP eCLIP29.84■■■□□ 2.37
CCDC12-201ENST00000292314 BAZ1AQ9NRL2 1556 aaPredicted RBP29.27■■■□□ 2.28
CCDC12-201ENST00000292314 CECR2Q9BXF3 1484 aa29.26■■■□□ 2.27
CCDC12-201ENST00000292314 SMARCA4P51532 1647 aa29.16■■■□□ 2.26
CCDC12-201ENST00000292314 EIF4G1Q04637 1599 aaKnown RBP29.14■■■□□ 2.26
CCDC12-201ENST00000292314 MROH2BQ7Z745 1585 aa29.08■■■□□ 2.25
CCDC12-201ENST00000292314 RSF1Q96T23 1441 aaPredicted RBP29.01■■■□□ 2.23
CCDC12-201ENST00000292314 SUPT5HO00267 1087 aaKnown RBP28.89■■■□□ 2.22
CCDC12-201ENST00000292314 SMARCA2P51531 1590 aa28.88■■■□□ 2.21
CCDC12-201ENST00000292314 PEG3Q9GZU2 1588 aa28.85■■■□□ 2.21
CCDC12-201ENST00000292314 CC2D2AQ9P2K1 1620 aa28.83■■■□□ 2.21
CCDC12-201ENST00000292314 WIZO95785 1651 aa28.82■■■□□ 2.2
CCDC12-201ENST00000292314 ATAD2BQ9ULI0 1458 aa28.78■■■□□ 2.2
CCDC12-201ENST00000292314 BAZ1BQ9UIG0 1483 aaKnown RBP28.67■■■□□ 2.18
CCDC12-201ENST00000292314 NCAPD3P42695 1498 aa28.66■■■□□ 2.18
CCDC12-201ENST00000292314 HMGXB3Q12766 1538 aa28.65■■■□□ 2.18
CCDC12-201ENST00000292314 TOP2AP11388 1531 aaKnown RBP28.62■■■□□ 2.17
CCDC12-201ENST00000292314 DNAJC5BQ9UF47 199 aa28.4■■■□□ 2.14
CCDC12-201ENST00000292314 CCDC88BA6NC98 1476 aa28.21■■■□□ 2.11
CCDC12-201ENST00000292314 CADPSQ9ULU8 1353 aa27.89■■■□□ 2.06
CCDC12-201ENST00000292314 CFTRP13569 1480 aa27.87■■■□□ 2.05
CCDC12-201ENST00000292314 LAMC3Q9Y6N6 1575 aa27.86■■■□□ 2.05
CCDC12-201ENST00000292314 PRDM2Q13029 1718 aa27.81■■■□□ 2.04
CCDC12-201ENST00000292314 NESP48681 1621 aa27.72■■■□□ 2.03
CCDC12-201ENST00000292314 PDS5BQ9NTI5 1447 aa27.67■■■□□ 2.02
CCDC12-201ENST00000292314 FANCD2Q9BXW9 1451 aa27.59■■■□□ 2.01
CCDC12-201ENST00000292314 CEP164Q9UPV0 1460 aa27.53■■■□□ 2
CCDC12-201ENST00000292314 ERCC6Q03468 1493 aa27.49■■□□□ 1.99
CCDC12-201ENST00000292314 KIF21AQ7Z4S6 1674 aa27.48■■□□□ 1.99
CCDC12-201ENST00000292314 ABCC8Q09428 1581 aa27.41■■□□□ 1.98
CCDC12-201ENST00000292314 WRNQ14191 1432 aaPredicted RBP eCLIP27.41■■□□□ 1.98
CCDC12-201ENST00000292314 MRC2Q9UBG0 1479 aa27.32■■□□□ 1.96
CCDC12-201ENST00000292314 TRIM41Q8WV44 630 aa27.29■■□□□ 1.96
CCDC12-201ENST00000292314 DNMBPQ6XZF7 1577 aa27.29■■□□□ 1.96
CCDC12-201ENST00000292314 TOP2BQ02880 1626 aa27.26■■□□□ 1.95
CCDC12-201ENST00000292314 PHF23Q9BUL5 403 aaPredicted RBP27.25■■□□□ 1.95
CCDC12-201ENST00000292314 BIVM-ERCC5R4GMW8 1640 aa27.25■■□□□ 1.95
CCDC12-201ENST00000292314 SYNJ1O43426 1573 aa27.25■■□□□ 1.95
CCDC12-201ENST00000292314 CUX1P39880 1505 aa27.25■■□□□ 1.95
CCDC12-201ENST00000292314 URB2Q14146 1524 aaKnown RBP27.21■■□□□ 1.95
CCDC12-201ENST00000292314 TOPBP1Q92547 1522 aa27.21■■□□□ 1.95
CCDC12-201ENST00000292314 THOC2Q8NI27 1593 aaKnown RBP27.18■■□□□ 1.94
CCDC12-201ENST00000292314 WDR62O43379 1518 aa27.17■■□□□ 1.94
CCDC12-201ENST00000292314 FGD5Q6ZNL6 1462 aa27.08■■□□□ 1.93
CCDC12-201ENST00000292314 POLA1P09884 1462 aaPredicted RBP27.02■■□□□ 1.92
CCDC12-201ENST00000292314 SOGA1O94964 1423 aa26.95■■□□□ 1.9
CCDC12-201ENST00000292314 IFT140Q96RY7 1462 aa26.91■■□□□ 1.9
CCDC12-201ENST00000292314 CUX2O14529 1486 aa26.89■■□□□ 1.9
CCDC12-201ENST00000292314 RAD54L2Q9Y4B4 1467 aa26.87■■□□□ 1.89
CCDC12-201ENST00000292314 ABCA10Q8WWZ4 1543 aa26.86■■□□□ 1.89
CCDC12-201ENST00000292314 TARBP1Q13395 1621 aaKnown RBP26.83■■□□□ 1.89
CCDC12-201ENST00000292314 EEA1Q15075 1411 aa26.82■■□□□ 1.88
CCDC12-201ENST00000292314 WDR97A6NE52 1622 aa26.82■■□□□ 1.88
CCDC12-201ENST00000292314 KIF27Q86VH2 1401 aa26.82■■□□□ 1.88
CCDC12-201ENST00000292314 ABCA5Q8WWZ7 1642 aa26.68■■□□□ 1.86
CCDC12-201ENST00000292314 TDRD9Q8NDG6 1382 aaKnown RBP26.67■■□□□ 1.86
CCDC12-201ENST00000292314 GAPVD1Q14C86 1478 aa26.67■■□□□ 1.86
CCDC12-201ENST00000292314 FAM9AQ8IZU1 332 aaPredicted RBP26.66■■□□□ 1.86
CCDC12-201ENST00000292314 EIF4G3O43432 1585 aaKnown RBP26.63■■□□□ 1.85
CCDC12-201ENST00000292314 RUSC2Q8N2Y8 1516 aa26.63■■□□□ 1.85
CCDC12-201ENST00000292314 ZNF608Q9ULD9 1512 aaPredicted RBP26.63■■□□□ 1.85
CCDC12-201ENST00000292314 CSRNP3Q8WYN3 585 aa26.59■■□□□ 1.85
CCDC12-201ENST00000292314 AQRO60306 1485 aaKnown RBP eCLIP26.59■■□□□ 1.853e-7■■■■□ 20.8
CCDC12-201ENST00000292314 PBRM1Q86U86 1689 aa26.59■■□□□ 1.85
CCDC12-201ENST00000292314 GRIN2BQ13224 1484 aa26.58■■□□□ 1.85
CCDC12-201ENST00000292314 ERICH3Q5RHP9 1530 aa26.58■■□□□ 1.85
CCDC12-201ENST00000292314 SENP3Q9H4L4 574 aaPredicted RBP26.55■■□□□ 1.84
CCDC12-201ENST00000292314 CUL7Q14999 1698 aa26.53■■□□□ 1.84
CCDC12-201ENST00000292314 IGF1RP08069 1367 aa26.5■■□□□ 1.83
CCDC12-201ENST00000292314 MAGI1Q96QZ7 1491 aaPredicted RBP26.44■■□□□ 1.82
CCDC12-201ENST00000292314 KIF21BO75037 1637 aa26.43■■□□□ 1.82
CCDC12-201ENST00000292314 CARMIL1Q5VZK9 1371 aa26.43■■□□□ 1.82
CCDC12-201ENST00000292314 SNAPC4Q5SXM2 1469 aa26.42■■□□□ 1.82
CCDC12-201ENST00000292314 PRXQ9BXM0 1461 aa26.4■■□□□ 1.82
CCDC12-201ENST00000292314 FHAD1B1AJZ9 1412 aa26.39■■□□□ 1.82
CCDC12-201ENST00000292314 ADAMTS12P58397 1594 aa26.39■■□□□ 1.82
CCDC12-201ENST00000292314 RAPGEF2Q9Y4G8 1499 aa26.37■■□□□ 1.81
CCDC12-201ENST00000292314 GOLGA3Q08378 1498 aa26.36■■□□□ 1.81
CCDC12-201ENST00000292314 SYNJ2O15056 1496 aa26.31■■□□□ 1.8
CCDC12-201ENST00000292314 CHMP7Q8WUX9 453 aaPredicted RBP26.27■■□□□ 1.8
CCDC12-201ENST00000292314 EHMT2Q96KQ7 1210 aa26.25■■□□□ 1.79
CCDC12-201ENST00000292314 UBTFP17480 764 aaKnown RBP26.23■■□□□ 1.79
CCDC12-201ENST00000292314 FBLN2P98095 1184 aa26.22■■□□□ 1.79
CCDC12-201ENST00000292314 GRIN2AQ12879 1464 aa26.22■■□□□ 1.79
CCDC12-201ENST00000292314 LOC105371045A0A1W2PR82 267 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms