RNA–Protein interactions for RNA: ENST00000541536.5

SOX5-212, Transcript of SRY-box 5, humanhuman

TSL 2 BASIC

Gene SOX5, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX5-212ENST00000541536 NISCHQ9Y2I1 1504 aa20.23■□□□□ 0.83
SOX5-212ENST00000541536 SHROOM4Q9ULL8 1493 aa17.27■□□□□ 0.35
SOX5-212ENST00000541536 CCDC180Q9P1Z9 1646 aa17.12■□□□□ 0.33
SOX5-212ENST00000541536 ZCCHC6Q5VYS8 1495 aaKnown RBP17.1■□□□□ 0.33
SOX5-212ENST00000541536 SUPT5HO00267 1087 aaKnown RBP16.91■□□□□ 0.3
SOX5-212ENST00000541536 DCAF8L2P0C7V8 631 aa16.81■□□□□ 0.28
SOX5-212ENST00000541536 DCAF1Q9Y4B6 1507 aa16.57■□□□□ 0.24
SOX5-212ENST00000541536 CHIC1Q5VXU3 224 aa16.44■□□□□ 0.22
SOX5-212ENST00000541536 MYO15BQ96JP2 1530 aa16.38■□□□□ 0.21
SOX5-212ENST00000541536 SCRIBQ14160 1630 aa16.12■□□□□ 0.17
SOX5-212ENST00000541536 ABCC9O60706 1549 aa16.09■□□□□ 0.17
SOX5-212ENST00000541536 RSF1Q96T23 1441 aaPredicted RBP16.03■□□□□ 0.16
SOX5-212ENST00000541536 LOC105371045A0A1W2PR82 267 aa15.99■□□□□ 0.15
SOX5-212ENST00000541536 AEBP2Q6ZN18 517 aaPredicted RBP15.95■□□□□ 0.14
SOX5-212ENST00000541536 NACADO15069 1562 aa15.88■□□□□ 0.13
SOX5-212ENST00000541536 PCGF6Q9BYE7 350 aa15.86■□□□□ 0.13
SOX5-212ENST00000541536 CECR2Q9BXF3 1484 aa15.85■□□□□ 0.13
SOX5-212ENST00000541536 HRCP23327 699 aa15.83■□□□□ 0.12
SOX5-212ENST00000541536 RB1CC1Q8TDY2 1594 aa15.81■□□□□ 0.12
SOX5-212ENST00000541536 MROH2BQ7Z745 1585 aa15.76■□□□□ 0.11
SOX5-212ENST00000541536 TRIM41Q8WV44 630 aa15.72■□□□□ 0.11
SOX5-212ENST00000541536 WIZO95785 1651 aa15.64■□□□□ 0.09
SOX5-212ENST00000541536 FAM9AQ8IZU1 332 aaPredicted RBP15.63■□□□□ 0.09
SOX5-212ENST00000541536 PPARGC1BQ86YN6 1023 aaKnown RBP15.58■□□□□ 0.08
SOX5-212ENST00000541536 TRIM26Q12899 539 aaPredicted RBP15.54■□□□□ 0.08
SOX5-212ENST00000541536 EHMT2Q96KQ7 1210 aa15.51■□□□□ 0.07
SOX5-212ENST00000541536 BAZ1AQ9NRL2 1556 aaPredicted RBP15.49■□□□□ 0.07
SOX5-212ENST00000541536 EIF4G1Q04637 1599 aaKnown RBP15.42■□□□□ 0.06
SOX5-212ENST00000541536 SMARCA4P51532 1647 aa15.39■□□□□ 0.05
SOX5-212ENST00000541536 UNC13AQ9UPW8 1703 aa15.38■□□□□ 0.05
SOX5-212ENST00000541536 TOP2AP11388 1531 aaKnown RBP15.37■□□□□ 0.05
SOX5-212ENST00000541536 CCDC88BA6NC98 1476 aa15.36■□□□□ 0.05
SOX5-212ENST00000541536 PABPN1Q86U42 306 aaKnown RBP eCLIP15.35■□□□□ 0.05
SOX5-212ENST00000541536 SMARCA2P51531 1590 aa15.31■□□□□ 0.04
SOX5-212ENST00000541536 ABCC8Q09428 1581 aa15.29■□□□□ 0.04
SOX5-212ENST00000541536 BICRAQ9NZM4 1560 aa15.28■□□□□ 0.04
SOX5-212ENST00000541536 SOGA1O94964 1423 aa15.18■□□□□ 0.02
SOX5-212ENST00000541536 RUSC2Q8N2Y8 1516 aa15.13■□□□□ 0.01
SOX5-212ENST00000541536 ZEB1P37275 1124 aaPredicted RBP15.12■□□□□ 0.01
SOX5-212ENST00000541536 PEG3Q9GZU2 1588 aa15.09■□□□□ 0.01
SOX5-212ENST00000541536 CSRNP3Q8WYN3 585 aa15.06■□□□□ 0
SOX5-212ENST00000541536 ATAD2BQ9ULI0 1458 aa15.04■□□□□ -0
SOX5-212ENST00000541536 CEP162Q5TB80 1403 aa15.03■□□□□ -0
SOX5-212ENST00000541536 TNIKQ9UKE5 1360 aa15.02■□□□□ -0
SOX5-212ENST00000541536 WRNQ14191 1432 aaPredicted RBP eCLIP15.02□□□□□ -0.01
SOX5-212ENST00000541536 EEA1Q15075 1411 aa14.99□□□□□ -0.01
SOX5-212ENST00000541536 TTBK1Q5TCY1 1321 aaPredicted RBP14.99□□□□□ -0.01
SOX5-212ENST00000541536 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.97□□□□□ -0.01
SOX5-212ENST00000541536 UBTFP17480 764 aaKnown RBP14.97□□□□□ -0.01
SOX5-212ENST00000541536 SYNJ1O43426 1573 aa14.96□□□□□ -0.01
SOX5-212ENST00000541536 BAZ1BQ9UIG0 1483 aaKnown RBP14.96□□□□□ -0.02
SOX5-212ENST00000541536 GOLGA3Q08378 1498 aa14.91□□□□□ -0.02
SOX5-212ENST00000541536 CCER1Q8TC90 406 aaPredicted RBP14.88□□□□□ -0.03
SOX5-212ENST00000541536 CEP164Q9UPV0 1460 aa14.82□□□□□ -0.04
SOX5-212ENST00000541536 KIF21BO75037 1637 aa14.79□□□□□ -0.04
SOX5-212ENST00000541536 RAPGEF2Q9Y4G8 1499 aa14.78□□□□□ -0.04
SOX5-212ENST00000541536 CLIP1P30622 1438 aa14.76□□□□□ -0.05
SOX5-212ENST00000541536 NCAPD3P42695 1498 aa14.75□□□□□ -0.05
SOX5-212ENST00000541536 TOP2BQ02880 1626 aa14.74□□□□□ -0.05
SOX5-212ENST00000541536 RANGAP1P46060 587 aaPredicted RBP14.73□□□□□ -0.05
SOX5-212ENST00000541536 HMGXB3Q12766 1538 aa14.69□□□□□ -0.06
SOX5-212ENST00000541536 VPS8Q8N3P4 1428 aa14.68□□□□□ -0.06
SOX5-212ENST00000541536 BIVM-ERCC5R4GMW8 1640 aa14.68□□□□□ -0.06
SOX5-212ENST00000541536 CUX1P39880 1505 aa14.66□□□□□ -0.06
SOX5-212ENST00000541536 HNRNPUL2Q1KMD3 747 aaKnown RBP14.65□□□□□ -0.06
SOX5-212ENST00000541536 PRXQ9BXM0 1461 aa14.64□□□□□ -0.07
SOX5-212ENST00000541536 CFTRP13569 1480 aa14.62□□□□□ -0.07
SOX5-212ENST00000541536 SCAF1Q9H7N4 1312 aaKnown RBP14.58□□□□□ -0.07
SOX5-212ENST00000541536 ERICH3Q5RHP9 1530 aa14.56□□□□□ -0.08
SOX5-212ENST00000541536 APLP2Q06481 763 aa14.56□□□□□ -0.08
SOX5-212ENST00000541536 DIEXFQ68CQ4 756 aaKnown RBP14.56□□□□□ -0.08
SOX5-212ENST00000541536 ARAP1Q96P48 1450 aa14.56□□□□□ -0.08
SOX5-212ENST00000541536 KIF27Q86VH2 1401 aa14.54□□□□□ -0.08
SOX5-212ENST00000541536 KANK4Q5T7N3 995 aaPredicted RBP14.53□□□□□ -0.08
SOX5-212ENST00000541536 ZNF316A6NFI3 1004 aaPredicted RBP14.48□□□□□ -0.09
SOX5-212ENST00000541536 CADPSQ9ULU8 1353 aa14.47□□□□□ -0.09
SOX5-212ENST00000541536 IGF1RP08069 1367 aa14.46□□□□□ -0.09
SOX5-212ENST00000541536 NEUROD1Q13562 356 aa14.45□□□□□ -0.1
SOX5-212ENST00000541536 CUX2O14529 1486 aa14.44□□□□□ -0.1
SOX5-212ENST00000541536 ARHGAP35Q9NRY4 1499 aa14.44□□□□□ -0.1
SOX5-212ENST00000541536 ACIN1Q9UKV3 1341 aaKnown RBP14.42□□□□□ -0.1
SOX5-212ENST00000541536 FGD5Q6ZNL6 1462 aa14.39□□□□□ -0.11
SOX5-212ENST00000541536 CC2D2AQ9P2K1 1620 aa14.37□□□□□ -0.11
SOX5-212ENST00000541536 CARMIL1Q5VZK9 1371 aa14.36□□□□□ -0.11
SOX5-212ENST00000541536 PRDM2Q13029 1718 aa14.36□□□□□ -0.11
SOX5-212ENST00000541536 DHX57Q6P158 1386 aaKnown RBP14.35□□□□□ -0.11
SOX5-212ENST00000541536 RRBP1Q9P2E9 1410 aaKnown RBP14.35□□□□□ -0.11
SOX5-212ENST00000541536 MIER1Q8N108 512 aa14.32□□□□□ -0.12
SOX5-212ENST00000541536 FANCD2Q9BXW9 1451 aa14.32□□□□□ -0.12
SOX5-212ENST00000541536 RAD54L2Q9Y4B4 1467 aa14.29□□□□□ -0.12
SOX5-212ENST00000541536 CCNB3Q8WWL7 1395 aa14.29□□□□□ -0.12
SOX5-212ENST00000541536 NESP48681 1621 aa14.28□□□□□ -0.12
SOX5-212ENST00000541536 ITGAEP38570 1179 aa14.27□□□□□ -0.13
SOX5-212ENST00000541536 P3H3Q8IVL6 736 aa14.26□□□□□ -0.13
SOX5-212ENST00000541536 CENPBP07199 599 aaPredicted RBP14.26□□□□□ -0.13
SOX5-212ENST00000541536 GTF3C3Q9Y5Q9 886 aa14.26□□□□□ -0.13
SOX5-212ENST00000541536 CLSPNQ9HAW4 1339 aa14.25□□□□□ -0.13
SOX5-212ENST00000541536 YTHDC1Q96MU7 727 aaKnown RBP14.23□□□□□ -0.13
SOX5-212ENST00000541536 TIAM1Q13009 1591 aa14.22□□□□□ -0.13
SOX5-212ENST00000541536 TOPBP1Q92547 1522 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms