RNA–Protein interactions for RNA: ENST00000582884.5

MSL1-209, Transcript of male specific lethal 1 homolog, humanhuman

TSL 5

Gene MSL1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL1-209ENST00000582884 AEBP2Q6ZN18 517 aaPredicted RBP19.79■□□□□ 0.76
MSL1-209ENST00000582884 CHIC1Q5VXU3 224 aa19.52■□□□□ 0.72
MSL1-209ENST00000582884 PHF23Q9BUL5 403 aaPredicted RBP17.14■□□□□ 0.33
MSL1-209ENST00000582884 SENP3Q9H4L4 574 aaPredicted RBP16.85■□□□□ 0.29
MSL1-209ENST00000582884 PLPPR3Q6T4P5 718 aa15.94■□□□□ 0.14
MSL1-209ENST00000582884 FOXD1Q16676 465 aa15.57■□□□□ 0.08
MSL1-209ENST00000582884 PPP6R1Q9UPN7 881 aa15.05■□□□□ -0
MSL1-209ENST00000582884 ADRA2BP18089 450 aa15.04■□□□□ -0
MSL1-209ENST00000582884 PIAS4Q8N2W9 510 aaPredicted RBP14.71□□□□□ -0.05
MSL1-209ENST00000582884 MSH5O43196 834 aa14.37□□□□□ -0.11
MSL1-209ENST00000582884 KCNA4P22459 653 aa14.25□□□□□ -0.13
MSL1-209ENST00000582884 PPP4R3CPQ6ZMV5 832 aa14.07□□□□□ -0.16
MSL1-209ENST00000582884 SCAF1Q9H7N4 1312 aaKnown RBP13.89□□□□□ -0.19
MSL1-209ENST00000582884 NCBP3Q53F19 620 aaKnown RBP13.83□□□□□ -0.2
MSL1-209ENST00000582884 EHMT2Q96KQ7 1210 aa13.83□□□□□ -0.2
MSL1-209ENST00000582884 SLC4A1APQ9BWU0 796 aaKnown RBP13.67□□□□□ -0.22
MSL1-209ENST00000582884 CNKSR2Q8WXI2 1034 aa13.65□□□□□ -0.22
MSL1-209ENST00000582884 NPM3O75607 178 aaKnown RBP13.62□□□□□ -0.23
MSL1-209ENST00000582884 MAPK8IP2Q13387 824 aaPredicted RBP13.59□□□□□ -0.23
MSL1-209ENST00000582884 DMRT2Q9Y5R5 561 aa13.46□□□□□ -0.25
MSL1-209ENST00000582884 CSRNP3Q8WYN3 585 aa13.41□□□□□ -0.26
MSL1-209ENST00000582884 RNF216Q9NWF9 866 aaPredicted RBP13.35□□□□□ -0.27
MSL1-209ENST00000582884 HOXD11P31277 338 aaPredicted RBP13.26□□□□□ -0.29
MSL1-209ENST00000582884 DNAJC5BQ9UF47 199 aa13.22□□□□□ -0.29
MSL1-209ENST00000582884 ZBTB22O15209 634 aa13.12□□□□□ -0.31
MSL1-209ENST00000582884 FOXD4L1Q9NU39 408 aa12.99□□□□□ -0.33
MSL1-209ENST00000582884 DCAF8L1A6NGE4 600 aa12.78□□□□□ -0.36
MSL1-209ENST00000582884 POTEDQ86YR6 584 aa12.77□□□□□ -0.37
MSL1-209ENST00000582884 SLC4A2P04920 1241 aa12.74□□□□□ -0.37
MSL1-209ENST00000582884 MYCNP04198 464 aaPredicted RBP12.58□□□□□ -0.4
MSL1-209ENST00000582884 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.58□□□□□ -0.48e-7■■■■□ 21.6
MSL1-209ENST00000582884 ATXN8OSP0DMR3 200 aa12.47□□□□□ -0.41
MSL1-209ENST00000582884 U3KPZ7 1027 aaPredicted RBP12.4□□□□□ -0.42
MSL1-209ENST00000582884 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.38□□□□□ -0.43
MSL1-209ENST00000582884 HNRNPUL2Q1KMD3 747 aaKnown RBP12.38□□□□□ -0.43
MSL1-209ENST00000582884 SAMD1Q6SPF0 538 aaPredicted RBP12.31□□□□□ -0.44
MSL1-209ENST00000582884 RNF39Q9H2S5 420 aa12.3□□□□□ -0.44
MSL1-209ENST00000582884 APLP2Q06481 763 aa12.23□□□□□ -0.45
MSL1-209ENST00000582884 ATF5Q9Y2D1 282 aaPredicted RBP12.22□□□□□ -0.45
MSL1-209ENST00000582884 C1QBPQ07021 282 aaKnown RBP12.19□□□□□ -0.46
MSL1-209ENST00000582884 FKBP8Q14318 412 aa12.13□□□□□ -0.47
MSL1-209ENST00000582884 ZNF219Q9P2Y4 722 aaPredicted RBP11.99□□□□□ -0.49
MSL1-209ENST00000582884 SPINK5Q9NQ38 1064 aaPredicted RBP11.97□□□□□ -0.49
MSL1-209ENST00000582884 CAPN15O75808 1086 aa11.94□□□□□ -0.5
MSL1-209ENST00000582884 TRHP20396 242 aaPredicted RBP11.9□□□□□ -0.5
MSL1-209ENST00000582884 CACNB1Q02641 598 aaPredicted RBP11.84□□□□□ -0.51
MSL1-209ENST00000582884 AMER1Q5JTC6 1135 aaPredicted RBP11.83□□□□□ -0.52
MSL1-209ENST00000582884 RTN4Q9NQC3 1192 aaKnown RBP11.81□□□□□ -0.52
MSL1-209ENST00000582884 POLA2Q14181 598 aa11.77□□□□□ -0.53
MSL1-209ENST00000582884 DSG3P32926 999 aa11.73□□□□□ -0.53
MSL1-209ENST00000582884 MKRN4PQ13434 485 aaPredicted RBP11.7□□□□□ -0.54
MSL1-209ENST00000582884 ABCB7O75027 752 aa11.69□□□□□ -0.54
MSL1-209ENST00000582884 FBLN2P98095 1184 aa11.68□□□□□ -0.54
MSL1-209ENST00000582884 SPDYE4A6NLX3 237 aa11.67□□□□□ -0.54
MSL1-209ENST00000582884 ZBTB12Q9Y330 459 aaPredicted RBP11.67□□□□□ -0.54
MSL1-209ENST00000582884 FBXO3Q9UK99 471 aa11.55□□□□□ -0.56
MSL1-209ENST00000582884 PROM2Q8N271 834 aa11.49□□□□□ -0.57
MSL1-209ENST00000582884 SLC24A1O60721 1099 aa11.42□□□□□ -0.58
MSL1-209ENST00000582884 VASPP50552 380 aaPredicted RBP11.38□□□□□ -0.59
MSL1-209ENST00000582884 SPDYE2BA6NHP3 402 aa11.34□□□□□ -0.59
MSL1-209ENST00000582884 SPDYE6P0CI01 402 aa11.34□□□□□ -0.59
MSL1-209ENST00000582884 SPDYE2Q495Y8 402 aa11.34□□□□□ -0.59
MSL1-209ENST00000582884 OSCARQ8IYS5 282 aa11.33□□□□□ -0.6
MSL1-209ENST00000582884 ZNF692Q9BU19 519 aaPredicted RBP11.3□□□□□ -0.6
MSL1-209ENST00000582884 IFNLR1Q8IU57 520 aaPredicted RBP11.26□□□□□ -0.61
MSL1-209ENST00000582884 SSUH2Q9Y2M2 353 aa11.25□□□□□ -0.61
MSL1-209ENST00000582884 RBM42Q9BTD8 480 aaKnown RBP11.24□□□□□ -0.61
MSL1-209ENST00000582884 PABPN1Q86U42 306 aaKnown RBP eCLIP11.16□□□□□ -0.62
MSL1-209ENST00000582884 STAG3Q9UJ98 1225 aa11.14□□□□□ -0.63
MSL1-209ENST00000582884 KLHL34Q8N239 644 aa11.13□□□□□ -0.63
MSL1-209ENST00000582884 AKT1S1Q96B36 256 aa11.11□□□□□ -0.63
MSL1-209ENST00000582884 PLCD3Q8N3E9 789 aa11.08□□□□□ -0.64
MSL1-209ENST00000582884 DCAF8L2P0C7V8 631 aa11.07□□□□□ -0.64
MSL1-209ENST00000582884 SPOCK2Q92563 424 aa11.06□□□□□ -0.64
MSL1-209ENST00000582884 PKD2Q13563 968 aa11.05□□□□□ -0.64
MSL1-209ENST00000582884 MIER1Q8N108 512 aa11.04□□□□□ -0.64
MSL1-209ENST00000582884 REM2Q8IYK8 340 aaPredicted RBP10.96□□□□□ -0.65
MSL1-209ENST00000582884 SPDYE1Q8NFV5 336 aaPredicted RBP10.96□□□□□ -0.65
MSL1-209ENST00000582884 ECM2O94769 699 aaPredicted RBP10.94□□□□□ -0.66
MSL1-209ENST00000582884 PLEKHG5O94827 1062 aa10.94□□□□□ -0.66
MSL1-209ENST00000582884 PLCB2Q00722 1185 aa10.92□□□□□ -0.66
MSL1-209ENST00000582884 ZBTB47Q9UFB7 747 aaPredicted RBP10.9□□□□□ -0.66
MSL1-209ENST00000582884 CIZ1Q9ULV3 898 aaPredicted RBP10.85□□□□□ -0.67
MSL1-209ENST00000582884 CLEC11AQ9Y240 323 aa10.83□□□□□ -0.68
MSL1-209ENST00000582884 PITPNM1O00562 1244 aa10.82□□□□□ -0.68
MSL1-209ENST00000582884 HAP1P54257 671 aaPredicted RBP10.82□□□□□ -0.68
MSL1-209ENST00000582884 RGL2O15211 777 aa10.8□□□□□ -0.68
MSL1-209ENST00000582884 PRR29P0C7W0 189 aa10.8□□□□□ -0.68
MSL1-209ENST00000582884 BBXQ8WY36 941 aaPredicted RBP10.75□□□□□ -0.69
MSL1-209ENST00000582884 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.75□□□□□ -0.69
MSL1-209ENST00000582884 NPM1P06748 294 aaKnown RBP eCLIP10.74□□□□□ -0.69
MSL1-209ENST00000582884 TRIM41Q8WV44 630 aa10.71□□□□□ -0.69
MSL1-209ENST00000582884 GSE1Q14687 1217 aa10.69□□□□□ -0.7
MSL1-209ENST00000582884 PAXIP1Q6ZW49 1069 aaPredicted RBP10.68□□□□□ -0.7
MSL1-209ENST00000582884 CREBZFQ9NS37 354 aa10.68□□□□□ -0.7
MSL1-209ENST00000582884 NUBP1P53384 320 aa10.67□□□□□ -0.7
MSL1-209ENST00000582884 CFAP44Q96MT7 982 aa10.67□□□□□ -0.7
MSL1-209ENST00000582884 DCAF8Q5TAQ9 597 aa10.66□□□□□ -0.7
MSL1-209ENST00000582884 CHRDL2Q6WN34 429 aa10.66□□□□□ -0.7
MSL1-209ENST00000582884 CHGAP10645 457 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms