RNA–Protein interactions for RNA: ENST00000456357.6

BRI3-202, Transcript of brain protein I3, humanhuman

TSL 2

Gene BRI3, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRI3-202ENST00000456357 NISCHQ9Y2I1 1504 aa43.78■■■■■ 4.6
BRI3-202ENST00000456357 CCDC180Q9P1Z9 1646 aa39.26■■■■□ 3.88
BRI3-202ENST00000456357 ABCC9O60706 1549 aa38.62■■■■□ 3.77
BRI3-202ENST00000456357 RB1CC1Q8TDY2 1594 aa37.04■■■■□ 3.52
BRI3-202ENST00000456357 NACADO15069 1562 aa36.87■■■■□ 3.49
BRI3-202ENST00000456357 DCAF8L2P0C7V8 631 aa36.6■■■■□ 3.45
BRI3-202ENST00000456357 MYO15BQ96JP2 1530 aa36.47■■■■□ 3.43
BRI3-202ENST00000456357 ZCCHC6Q5VYS8 1495 aaKnown RBP36.43■■■■□ 3.42
BRI3-202ENST00000456357 UNC13AQ9UPW8 1703 aa36.4■■■■□ 3.42
BRI3-202ENST00000456357 DCAF1Q9Y4B6 1507 aa36.2■■■■□ 3.39
BRI3-202ENST00000456357 BICRAQ9NZM4 1560 aa35.93■■■■□ 3.34
BRI3-202ENST00000456357 PABPN1Q86U42 306 aaKnown RBP eCLIP35.91■■■■□ 3.34
BRI3-202ENST00000456357 SCRIBQ14160 1630 aa35.77■■■■□ 3.32
BRI3-202ENST00000456357 DNAJC5BQ9UF47 199 aa35.63■■■■□ 3.29
BRI3-202ENST00000456357 SHROOM4Q9ULL8 1493 aa35.48■■■■□ 3.27
BRI3-202ENST00000456357 EIF4G1Q04637 1599 aaKnown RBP35.02■■■■□ 3.2
BRI3-202ENST00000456357 CC2D2AQ9P2K1 1620 aa34.99■■■■□ 3.19
BRI3-202ENST00000456357 CECR2Q9BXF3 1484 aa34.72■■■■□ 3.15
BRI3-202ENST00000456357 SMARCA4P51532 1647 aa34.15■■■■□ 3.06
BRI3-202ENST00000456357 BAZ1AQ9NRL2 1556 aaPredicted RBP34■■■■□ 3.03
BRI3-202ENST00000456357 SMARCA2P51531 1590 aa33.94■■■■□ 3.02
BRI3-202ENST00000456357 NCAPD3P42695 1498 aa33.93■■■■□ 3.02
BRI3-202ENST00000456357 ATAD2BQ9ULI0 1458 aa33.93■■■■□ 3.02
BRI3-202ENST00000456357 HMGXB3Q12766 1538 aa33.86■■■■□ 3.01
BRI3-202ENST00000456357 PEG3Q9GZU2 1588 aa33.77■■■■□ 3
BRI3-202ENST00000456357 MROH2BQ7Z745 1585 aa33.75■■■□□ 2.99
BRI3-202ENST00000456357 BAZ1BQ9UIG0 1483 aaKnown RBP33.69■■■□□ 2.98
BRI3-202ENST00000456357 WIZO95785 1651 aa33.47■■■□□ 2.95
BRI3-202ENST00000456357 ERCC6Q03468 1493 aa33.33■■■□□ 2.93
BRI3-202ENST00000456357 NESP48681 1621 aa33.32■■■□□ 2.92
BRI3-202ENST00000456357 LAMC3Q9Y6N6 1575 aa33.22■■■□□ 2.91
BRI3-202ENST00000456357 RSF1Q96T23 1441 aaPredicted RBP33.15■■■□□ 2.9
BRI3-202ENST00000456357 KIF21AQ7Z4S6 1674 aa33.1■■■□□ 2.89
BRI3-202ENST00000456357 CUX2O14529 1486 aa33.09■■■□□ 2.89
BRI3-202ENST00000456357 TOP2AP11388 1531 aaKnown RBP33.04■■■□□ 2.88
BRI3-202ENST00000456357 THOC2Q8NI27 1593 aaKnown RBP33.01■■■□□ 2.88
BRI3-202ENST00000456357 CADPSQ9ULU8 1353 aa32.9■■■□□ 2.86
BRI3-202ENST00000456357 PDS5BQ9NTI5 1447 aa32.9■■■□□ 2.86
BRI3-202ENST00000456357 PRDM2Q13029 1718 aa32.73■■■□□ 2.83
BRI3-202ENST00000456357 CFTRP13569 1480 aa32.67■■■□□ 2.82
BRI3-202ENST00000456357 MRC2Q9UBG0 1479 aa32.66■■■□□ 2.82
BRI3-202ENST00000456357 CEP164Q9UPV0 1460 aa32.64■■■□□ 2.82
BRI3-202ENST00000456357 FANCD2Q9BXW9 1451 aa32.61■■■□□ 2.81
BRI3-202ENST00000456357 WDR62O43379 1518 aa32.61■■■□□ 2.81
BRI3-202ENST00000456357 CCDC88BA6NC98 1476 aa32.56■■■□□ 2.8
BRI3-202ENST00000456357 DNAJC5Q9H3Z4 198 aa32.35■■■□□ 2.77
BRI3-202ENST00000456357 URB2Q14146 1524 aaKnown RBP32.33■■■□□ 2.77
BRI3-202ENST00000456357 TOPBP1Q92547 1522 aa32.07■■■□□ 2.72
BRI3-202ENST00000456357 DNMBPQ6XZF7 1577 aa32.06■■■□□ 2.72
BRI3-202ENST00000456357 SUPT5HO00267 1087 aaKnown RBP31.99■■■□□ 2.71
BRI3-202ENST00000456357 ABCC8Q09428 1581 aa31.98■■■□□ 2.71
BRI3-202ENST00000456357 IFT140Q96RY7 1462 aa31.92■■■□□ 2.7
BRI3-202ENST00000456357 ZNF608Q9ULD9 1512 aaPredicted RBP31.84■■■□□ 2.69
BRI3-202ENST00000456357 EIF4G3O43432 1585 aaKnown RBP31.83■■■□□ 2.69
BRI3-202ENST00000456357 TARBP1Q13395 1621 aaKnown RBP31.81■■■□□ 2.68
BRI3-202ENST00000456357 POLA1P09884 1462 aaPredicted RBP31.77■■■□□ 2.68
BRI3-202ENST00000456357 CUX1P39880 1505 aa31.71■■■□□ 2.67
BRI3-202ENST00000456357 FGD5Q6ZNL6 1462 aa31.65■■■□□ 2.66
BRI3-202ENST00000456357 RAD54L2Q9Y4B4 1467 aa31.61■■■□□ 2.65
BRI3-202ENST00000456357 WDR97A6NE52 1622 aa31.57■■■□□ 2.64
BRI3-202ENST00000456357 CHD1O14646 1710 aa31.57■■■□□ 2.64
BRI3-202ENST00000456357 AQRO60306 1485 aaKnown RBP eCLIP31.56■■■□□ 2.64
BRI3-202ENST00000456357 SOGA1O94964 1423 aa31.55■■■□□ 2.64
BRI3-202ENST00000456357 OSCARQ8IYS5 282 aa31.5■■■□□ 2.63
BRI3-202ENST00000456357 BIVM-ERCC5R4GMW8 1640 aa31.43■■■□□ 2.62
BRI3-202ENST00000456357 PBRM1Q86U86 1689 aa31.42■■■□□ 2.62
BRI3-202ENST00000456357 TDRD9Q8NDG6 1382 aaKnown RBP31.42■■■□□ 2.62
BRI3-202ENST00000456357 TOP2BQ02880 1626 aa31.38■■■□□ 2.61
BRI3-202ENST00000456357 SYNJ1O43426 1573 aa31.37■■■□□ 2.61
BRI3-202ENST00000456357 SNAPC4Q5SXM2 1469 aa31.33■■■□□ 2.61
BRI3-202ENST00000456357 ABCA5Q8WWZ7 1642 aa31.32■■■□□ 2.6
BRI3-202ENST00000456357 WRNQ14191 1432 aaPredicted RBP eCLIP31.31■■■□□ 2.6
BRI3-202ENST00000456357 ABCA10Q8WWZ4 1543 aa31.29■■■□□ 2.6
BRI3-202ENST00000456357 RIMBP3CA6NJZ7 1639 aa31.29■■■□□ 2.6
BRI3-202ENST00000456357 RIMBP3BA6NNM3 1639 aa31.29■■■□□ 2.6
BRI3-202ENST00000456357 RIMBP3Q9UFD9 1639 aa31.29■■■□□ 2.6
BRI3-202ENST00000456357 GRIN2BQ13224 1484 aa31.27■■■□□ 2.6
BRI3-202ENST00000456357 MAGI1Q96QZ7 1491 aaPredicted RBP31.26■■■□□ 2.59
BRI3-202ENST00000456357 GAPVD1Q14C86 1478 aa31.24■■■□□ 2.59
BRI3-202ENST00000456357 TRIM41Q8WV44 630 aa31.22■■■□□ 2.59
BRI3-202ENST00000456357 FBLN2P98095 1184 aa31.21■■■□□ 2.59
BRI3-202ENST00000456357 ARHGEF11O15085 1522 aa31.19■■■□□ 2.58
BRI3-202ENST00000456357 SYNJ2O15056 1496 aa31.14■■■□□ 2.57
BRI3-202ENST00000456357 CLASP1Q7Z460 1538 aa31.08■■■□□ 2.57
BRI3-202ENST00000456357 ADAMTS12P58397 1594 aa31.05■■■□□ 2.56
BRI3-202ENST00000456357 CHMP7Q8WUX9 453 aaPredicted RBP31.04■■■□□ 2.56
BRI3-202ENST00000456357 ERICH3Q5RHP9 1530 aa30.94■■■□□ 2.54
BRI3-202ENST00000456357 GRIN2AQ12879 1464 aa30.91■■■□□ 2.54
BRI3-202ENST00000456357 ARAP1Q96P48 1450 aa30.89■■■□□ 2.54
BRI3-202ENST00000456357 CEP170Q5SW79 1584 aa30.83■■■□□ 2.53
BRI3-202ENST00000456357 FHAD1B1AJZ9 1412 aa30.82■■■□□ 2.52
BRI3-202ENST00000456357 CYB5RLQ6IPT4 315 aa30.75■■■□□ 2.51
BRI3-202ENST00000456357 NUP160Q12769 1436 aa30.74■■■□□ 2.51
BRI3-202ENST00000456357 CUL7Q14999 1698 aa30.69■■■□□ 2.5
BRI3-202ENST00000456357 SHROOM2Q13796 1616 aa30.68■■■□□ 2.5
BRI3-202ENST00000456357 KIF27Q86VH2 1401 aa30.66■■■□□ 2.5
BRI3-202ENST00000456357 ERCC6L2Q5T890 1561 aa30.62■■■□□ 2.49
BRI3-202ENST00000456357 RUSC2Q8N2Y8 1516 aa30.62■■■□□ 2.49
BRI3-202ENST00000456357 IGF1RP08069 1367 aa30.5■■■□□ 2.47
BRI3-202ENST00000456357 PRG4Q92954 1404 aaPredicted RBP30.39■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms